RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
MAP1LC3C-201ENST00000357246 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
MAP1LC3C-201ENST00000357246 LINC01558Q9Y6Z2 57 aa3.48□□□□□ -1.85
MAP1LC3C-201ENST00000357246 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
MAP1LC3C-201ENST00000357246 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
MAP1LC3C-201ENST00000357246 UQCR11O14957 56 aa3.44□□□□□ -1.86
MAP1LC3C-201ENST00000357246 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
MAP1LC3C-201ENST00000357246 A0A1B0GU69 56 aa3.43□□□□□ -1.86
MAP1LC3C-201ENST00000357246 KRTAP13-4Q3LI77 160 aa3.41□□□□□ -1.86
MAP1LC3C-201ENST00000357246 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
MAP1LC3C-201ENST00000357246 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
MAP1LC3C-201ENST00000357246 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
MAP1LC3C-201ENST00000357246 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
MAP1LC3C-201ENST00000357246 INE1O15225 51 aa3.37□□□□□ -1.87
MAP1LC3C-201ENST00000357246 MT3P25713 68 aa3.35□□□□□ -1.87
MAP1LC3C-201ENST00000357246 SPRR2EP22531 72 aa3.34□□□□□ -1.87
MAP1LC3C-201ENST00000357246 SPRR2BP35325 72 aa3.34□□□□□ -1.87
MAP1LC3C-201ENST00000357246 SPRR2AP35326 72 aa3.34□□□□□ -1.87
MAP1LC3C-201ENST00000357246 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
MAP1LC3C-201ENST00000357246 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
MAP1LC3C-201ENST00000357246 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
MAP1LC3C-201ENST00000357246 A0A0D9SG42 100 aa3.29□□□□□ -1.88
MAP1LC3C-201ENST00000357246 SPRR2DP22532 72 aa3.25□□□□□ -1.89
MAP1LC3C-201ENST00000357246 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
MAP1LC3C-201ENST00000357246 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
MAP1LC3C-201ENST00000357246 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
MAP1LC3C-201ENST00000357246 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
MAP1LC3C-201ENST00000357246 MT1EP04732 61 aa3.14□□□□□ -1.91
MAP1LC3C-201ENST00000357246 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
MAP1LC3C-201ENST00000357246 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
MAP1LC3C-201ENST00000357246 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
MAP1LC3C-201ENST00000357246 TNP1P09430 55 aa3.1□□□□□ -1.91
MAP1LC3C-201ENST00000357246 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
MAP1LC3C-201ENST00000357246 MT1GP13640 62 aa3.08□□□□□ -1.92
MAP1LC3C-201ENST00000357246 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
MAP1LC3C-201ENST00000357246 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
MAP1LC3C-201ENST00000357246 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
MAP1LC3C-201ENST00000357246 MT1LQ93083 61 aa3.02□□□□□ -1.93
MAP1LC3C-201ENST00000357246 MT1MQ8N339 61 aa2.99□□□□□ -1.93
MAP1LC3C-201ENST00000357246 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
MAP1LC3C-201ENST00000357246 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
MAP1LC3C-201ENST00000357246 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
MAP1LC3C-201ENST00000357246 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
MAP1LC3C-201ENST00000357246 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
MAP1LC3C-201ENST00000357246 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
MAP1LC3C-201ENST00000357246 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
MAP1LC3C-201ENST00000357246 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
MAP1LC3C-201ENST00000357246 MT4P47944 62 aa2.85□□□□□ -1.95
MAP1LC3C-201ENST00000357246 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
MAP1LC3C-201ENST00000357246 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
MAP1LC3C-201ENST00000357246 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
MAP1LC3C-201ENST00000357246 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
MAP1LC3C-201ENST00000357246 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
MAP1LC3C-201ENST00000357246 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
MAP1LC3C-201ENST00000357246 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
MAP1LC3C-201ENST00000357246 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
MAP1LC3C-201ENST00000357246 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
MAP1LC3C-201ENST00000357246 MT1AP04731 61 aa2.57□□□□□ -2
MAP1LC3C-201ENST00000357246 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
MAP1LC3C-201ENST00000357246 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
MAP1LC3C-201ENST00000357246 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
MAP1LC3C-201ENST00000357246 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
MAP1LC3C-201ENST00000357246 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
MAP1LC3C-201ENST00000357246 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
MAP1LC3C-201ENST00000357246 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
MAP1LC3C-201ENST00000357246 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
MAP1LC3C-201ENST00000357246 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
MAP1LC3C-201ENST00000357246 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
MAP1LC3C-201ENST00000357246 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
MAP1LC3C-201ENST00000357246 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
MAP1LC3C-201ENST00000357246 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
MAP1LC3C-201ENST00000357246 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
MAP1LC3C-201ENST00000357246 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
MAP1LC3C-201ENST00000357246 PRM1P04553 51 aa1.52□□□□□ -2.17
MAP1LC3C-201ENST00000357246 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
MAP1LC3C-201ENST00000357246 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
MAP1LC3C-201ENST00000357246 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 77.8 ms