RNA–Protein interactions for RNA: ENST00000641260.1

SAMMSON-210, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,308 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-210ENST00000641260 COL7A1Q02388 2944 aa3.45□□□□□ -1.86
SAMMSON-210ENST00000641260 EPPK1P58107 5090 aaKnown RBP3.44□□□□□ -1.86
SAMMSON-210ENST00000641260 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
SAMMSON-210ENST00000641260 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
SAMMSON-210ENST00000641260 SPART-AS1P0CW21 52 aa3.43□□□□□ -1.86
SAMMSON-210ENST00000641260 PRLHP81277 87 aa3.41□□□□□ -1.86
SAMMSON-210ENST00000641260 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
SAMMSON-210ENST00000641260 LYSTQ99698 3801 aa3.4□□□□□ -1.87
SAMMSON-210ENST00000641260 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
SAMMSON-210ENST00000641260 SPINK1P00995 79 aa3.37□□□□□ -1.87
SAMMSON-210ENST00000641260 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
SAMMSON-210ENST00000641260 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SAMMSON-210ENST00000641260 CSMD3Q7Z407 3707 aa3.37□□□□□ -1.87
SAMMSON-210ENST00000641260 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
SAMMSON-210ENST00000641260 HERC2O95714 4834 aa3.35□□□□□ -1.87
SAMMSON-210ENST00000641260 TENM2Q9NT68 2774 aa3.35□□□□□ -1.87
SAMMSON-210ENST00000641260 A0A096LNI7 61 aa3.34□□□□□ -1.87
SAMMSON-210ENST00000641260 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
SAMMSON-210ENST00000641260 DNAH10Q8IVF4 4471 aa3.34□□□□□ -1.88
SAMMSON-210ENST00000641260 DNAH6Q9C0G6 4158 aa3.32□□□□□ -1.88
SAMMSON-210ENST00000641260 VPS13DQ5THJ4 4388 aa3.32□□□□□ -1.88
SAMMSON-210ENST00000641260 INE1O15225 51 aa3.32□□□□□ -1.88
SAMMSON-210ENST00000641260 HTN3P15516 51 aa3.32□□□□□ -1.88
SAMMSON-210ENST00000641260 HECTD4Q9Y4D8 3996 aa3.31□□□□□ -1.88
SAMMSON-210ENST00000641260 TYMSOSQ8TAI1 123 aa3.3□□□□□ -1.88
SAMMSON-210ENST00000641260 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
SAMMSON-210ENST00000641260 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
SAMMSON-210ENST00000641260 UBE2DNLQ8IWF7 75 aa3.29□□□□□ -1.88
SAMMSON-210ENST00000641260 FRAS1Q86XX4 4008 aa3.29□□□□□ -1.88
SAMMSON-210ENST00000641260 DEFB135Q30KP9 77 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 SPINK6Q6UWN8 80 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 KRTAP13-1Q8IUC0 172 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 KMT2AQ03164 3969 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
SAMMSON-210ENST00000641260 Q6ZRN7 208 aaPredicted RBP3.27□□□□□ -1.89
SAMMSON-210ENST00000641260 R4GN34 69 aa3.27□□□□□ -1.89
SAMMSON-210ENST00000641260 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
SAMMSON-210ENST00000641260 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
SAMMSON-210ENST00000641260 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
SAMMSON-210ENST00000641260 PKHD1P08F94 4074 aa3.24□□□□□ -1.89
SAMMSON-210ENST00000641260 APLNQ9ULZ1 77 aa3.23□□□□□ -1.89
SAMMSON-210ENST00000641260 S4R3F8 94 aa3.23□□□□□ -1.89
SAMMSON-210ENST00000641260 RYR1P21817 5038 aa3.23□□□□□ -1.89
SAMMSON-210ENST00000641260 SPACA4Q8TDM5 124 aa3.22□□□□□ -1.89
SAMMSON-210ENST00000641260 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.9
SAMMSON-210ENST00000641260 DEFB4AO15263 64 aa3.2□□□□□ -1.9
SAMMSON-210ENST00000641260 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
SAMMSON-210ENST00000641260 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
SAMMSON-210ENST00000641260 HSPG2P98160 4391 aa3.19□□□□□ -1.9
SAMMSON-210ENST00000641260 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
SAMMSON-210ENST00000641260 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
SAMMSON-210ENST00000641260 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SAMMSON-210ENST00000641260 PKD1P98161 4303 aa3.18□□□□□ -1.9
SAMMSON-210ENST00000641260 DNAH5Q8TE73 4624 aa3.17□□□□□ -1.9
SAMMSON-210ENST00000641260 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
SAMMSON-210ENST00000641260 A0A0D9SG42 100 aa3.15□□□□□ -1.91
SAMMSON-210ENST00000641260 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
SAMMSON-210ENST00000641260 FAT1Q14517 4588 aa3.1□□□□□ -1.91
SAMMSON-210ENST00000641260 M0QZ58 72 aa3.1□□□□□ -1.91
SAMMSON-210ENST00000641260 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SAMMSON-210ENST00000641260 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
SAMMSON-210ENST00000641260 HERC1Q15751 4861 aa3.09□□□□□ -1.92
SAMMSON-210ENST00000641260 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
SAMMSON-210ENST00000641260 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
SAMMSON-210ENST00000641260 DNAH8Q96JB1 4490 aa3.06□□□□□ -1.92
SAMMSON-210ENST00000641260 MYCBP2O75592 4640 aa3.05□□□□□ -1.92
SAMMSON-210ENST00000641260 KRTAP13-4Q3LI77 160 aa3.05□□□□□ -1.92
SAMMSON-210ENST00000641260 VPS13BQ7Z7G8 4022 aa3.03□□□□□ -1.92
SAMMSON-210ENST00000641260 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
SAMMSON-210ENST00000641260 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
SAMMSON-210ENST00000641260 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
SAMMSON-210ENST00000641260 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
SAMMSON-210ENST00000641260 DMBT1Q9UGM3 2413 aaPredicted RBP3□□□□□ -1.93
SAMMSON-210ENST00000641260 Q5VSD8 79 aa2.99□□□□□ -1.93
SAMMSON-210ENST00000641260 KRTAP10-1P60331 282 aa2.98□□□□□ -1.93
SAMMSON-210ENST00000641260 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
SAMMSON-210ENST00000641260 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
SAMMSON-210ENST00000641260 PKHD1L1Q86WI1 4243 aa2.94□□□□□ -1.94
SAMMSON-210ENST00000641260 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
SAMMSON-210ENST00000641260 LRP1Q07954 4544 aaKnown RBP2.93□□□□□ -1.94
SAMMSON-210ENST00000641260 SMR3BP02814 79 aaPredicted RBP2.93□□□□□ -1.94
SAMMSON-210ENST00000641260 SRRM2Q9UQ35 2752 aaKnown RBP2.92□□□□□ -1.94
SAMMSON-210ENST00000641260 MT3P25713 68 aa2.92□□□□□ -1.94
SAMMSON-210ENST00000641260 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
SAMMSON-210ENST00000641260 KRTAP10-4P60372 401 aaPredicted RBP2.88□□□□□ -1.95
SAMMSON-210ENST00000641260 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
SAMMSON-210ENST00000641260 TNXBP22105 4242 aa2.86□□□□□ -1.95
SAMMSON-210ENST00000641260 LRP2P98164 4655 aa2.84□□□□□ -1.95
SAMMSON-210ENST00000641260 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
SAMMSON-210ENST00000641260 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
SAMMSON-210ENST00000641260 RNF213Q63HN8 5207 aa2.79□□□□□ -1.96
SAMMSON-210ENST00000641260 TNP1P09430 55 aa2.77□□□□□ -1.97
SAMMSON-210ENST00000641260 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
SAMMSON-210ENST00000641260 C9orf92A6NGG3 77 aa2.73□□□□□ -1.97
SAMMSON-210ENST00000641260 LPAP08519 4548 aa2.71□□□□□ -1.97
SAMMSON-210ENST00000641260 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
SAMMSON-210ENST00000641260 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
SAMMSON-210ENST00000641260 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms