RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
KCNMA1-278ENST00000640141 BSNQ9UPA5 3926 aa7.48□□□□□ -1.21
KCNMA1-278ENST00000640141 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
KCNMA1-278ENST00000640141 DNAH9Q9NYC9 4486 aa7.46□□□□□ -1.22
KCNMA1-278ENST00000640141 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
KCNMA1-278ENST00000640141 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
KCNMA1-278ENST00000640141 MT1HP80294 61 aa7.39□□□□□ -1.23
KCNMA1-278ENST00000640141 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
KCNMA1-278ENST00000640141 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
KCNMA1-278ENST00000640141 MT2AP02795 61 aa7.31□□□□□ -1.24
KCNMA1-278ENST00000640141 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
KCNMA1-278ENST00000640141 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
KCNMA1-278ENST00000640141 DNAH1Q9P2D7 4330 aa7.29□□□□□ -1.24
KCNMA1-278ENST00000640141 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
KCNMA1-278ENST00000640141 DNAH2Q9P225 4427 aa7.2□□□□□ -1.26
KCNMA1-278ENST00000640141 CSMD3Q7Z407 3707 aa7.2□□□□□ -1.26
KCNMA1-278ENST00000640141 FAT1Q14517 4588 aa7.17□□□□□ -1.26
KCNMA1-278ENST00000640141 DYNC1H1Q14204 4646 aaKnown RBP7.14□□□□□ -1.27
KCNMA1-278ENST00000640141 MT1FP04733 61 aa7.12□□□□□ -1.27
KCNMA1-278ENST00000640141 RYR1P21817 5038 aa7.09□□□□□ -1.27
KCNMA1-278ENST00000640141 VPS13DQ5THJ4 4388 aa7.08□□□□□ -1.28
KCNMA1-278ENST00000640141 DNAH17Q9UFH2 4485 aa7.07□□□□□ -1.28
KCNMA1-278ENST00000640141 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
KCNMA1-278ENST00000640141 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
KCNMA1-278ENST00000640141 AKAP9Q99996 3911 aa7.03□□□□□ -1.28
KCNMA1-278ENST00000640141 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
KCNMA1-278ENST00000640141 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
KCNMA1-278ENST00000640141 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
KCNMA1-278ENST00000640141 SACSQ9NZJ4 4579 aa6.97□□□□□ -1.29
KCNMA1-278ENST00000640141 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
KCNMA1-278ENST00000640141 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
KCNMA1-278ENST00000640141 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
KCNMA1-278ENST00000640141 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
KCNMA1-278ENST00000640141 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
KCNMA1-278ENST00000640141 DYNC2H1Q8NCM8 4307 aaKnown RBP6.82□□□□□ -1.32
KCNMA1-278ENST00000640141 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
KCNMA1-278ENST00000640141 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
KCNMA1-278ENST00000640141 RYR3Q15413 4870 aa6.72□□□□□ -1.33
KCNMA1-278ENST00000640141 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
KCNMA1-278ENST00000640141 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
KCNMA1-278ENST00000640141 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.35
KCNMA1-278ENST00000640141 DNAH3Q8TD57 4116 aa6.64□□□□□ -1.35
KCNMA1-278ENST00000640141 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
KCNMA1-278ENST00000640141 SPRR2EP22531 72 aa6.58□□□□□ -1.36
KCNMA1-278ENST00000640141 SPRR2BP35325 72 aa6.58□□□□□ -1.36
KCNMA1-278ENST00000640141 SPRR2AP35326 72 aa6.58□□□□□ -1.36
KCNMA1-278ENST00000640141 VPS13BQ7Z7G8 4022 aa6.57□□□□□ -1.36
KCNMA1-278ENST00000640141 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
KCNMA1-278ENST00000640141 MT1XP80297 61 aa6.54□□□□□ -1.36
KCNMA1-278ENST00000640141 RYR2Q92736 4967 aa6.53□□□□□ -1.36
KCNMA1-278ENST00000640141 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
KCNMA1-278ENST00000640141 FAT3Q8TDW7 4589 aa6.52□□□□□ -1.37
KCNMA1-278ENST00000640141 ANK2Q01484 3957 aa6.48□□□□□ -1.37
KCNMA1-278ENST00000640141 MT1BP07438 61 aa6.48□□□□□ -1.37
KCNMA1-278ENST00000640141 KMT2AQ03164 3969 aa6.44□□□□□ -1.38
KCNMA1-278ENST00000640141 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
KCNMA1-278ENST00000640141 LYSTQ99698 3801 aa6.42□□□□□ -1.38
KCNMA1-278ENST00000640141 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
KCNMA1-278ENST00000640141 SPRR2DP22532 72 aa6.37□□□□□ -1.39
KCNMA1-278ENST00000640141 MT1GP13640 62 aa6.37□□□□□ -1.39
KCNMA1-278ENST00000640141 HERC2O95714 4834 aa6.36□□□□□ -1.39
KCNMA1-278ENST00000640141 LCE2BO14633 110 aa6.36□□□□□ -1.39
KCNMA1-278ENST00000640141 HERC1Q15751 4861 aa6.34□□□□□ -1.39
KCNMA1-278ENST00000640141 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
KCNMA1-278ENST00000640141 DNAH6Q9C0G6 4158 aa6.31□□□□□ -1.4
KCNMA1-278ENST00000640141 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
KCNMA1-278ENST00000640141 BIRC6Q9NR09 4857 aa6.3□□□□□ -1.4
KCNMA1-278ENST00000640141 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
KCNMA1-278ENST00000640141 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
KCNMA1-278ENST00000640141 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
KCNMA1-278ENST00000640141 PCLOQ9Y6V0 5065 aa6.25□□□□□ -1.41
KCNMA1-278ENST00000640141 DNAH7Q8WXX0 4024 aa6.24□□□□□ -1.41
KCNMA1-278ENST00000640141 PKD1P98161 4303 aa6.22□□□□□ -1.41
KCNMA1-278ENST00000640141 HSPG2P98160 4391 aa6.2□□□□□ -1.42
KCNMA1-278ENST00000640141 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
KCNMA1-278ENST00000640141 CMYA5Q8N3K9 4069 aa6.17□□□□□ -1.42
KCNMA1-278ENST00000640141 LRP2P98164 4655 aa6.11□□□□□ -1.43
KCNMA1-278ENST00000640141 LCE3DQ9BYE3 92 aa6.11□□□□□ -1.43
KCNMA1-278ENST00000640141 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
KCNMA1-278ENST00000640141 LCE3EQ5T5B0 92 aa6.02□□□□□ -1.45
KCNMA1-278ENST00000640141 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
KCNMA1-278ENST00000640141 HECTD4Q9Y4D8 3996 aa5.99□□□□□ -1.45
KCNMA1-278ENST00000640141 MT1LQ93083 61 aa5.98□□□□□ -1.45
KCNMA1-278ENST00000640141 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
KCNMA1-278ENST00000640141 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
KCNMA1-278ENST00000640141 FRAS1Q86XX4 4008 aa5.96□□□□□ -1.46
KCNMA1-278ENST00000640141 MT1EP04732 61 aa5.93□□□□□ -1.46
KCNMA1-278ENST00000640141 HYDINQ4G0P3 5121 aa5.9□□□□□ -1.47
KCNMA1-278ENST00000640141 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
KCNMA1-278ENST00000640141 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
KCNMA1-278ENST00000640141 ABCA13Q86UQ4 5058 aa5.78□□□□□ -1.48
KCNMA1-278ENST00000640141 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
KCNMA1-278ENST00000640141 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
KCNMA1-278ENST00000640141 KMT2CQ8NEZ4 4911 aaKnown RBP5.76□□□□□ -1.49
KCNMA1-278ENST00000640141 MT1MQ8N339 61 aa5.76□□□□□ -1.49
KCNMA1-278ENST00000640141 PKHD1P08F94 4074 aa5.76□□□□□ -1.49
KCNMA1-278ENST00000640141 MT3P25713 68 aa5.73□□□□□ -1.49
KCNMA1-278ENST00000640141 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
KCNMA1-278ENST00000640141 LPAP08519 4548 aa5.71□□□□□ -1.49
KCNMA1-278ENST00000640141 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms