RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CFAP47Q6ZTR5 3102 aa-6.29□□□□□ -3.42
LMBR1-222ENST00000638959 UNC13AQ9UPW8 1703 aa-6.3□□□□□ -3.42
LMBR1-222ENST00000638959 GNG8Q9UK08 70 aa-6.31□□□□□ -3.42
LMBR1-222ENST00000638959 PVALEFA0A1B0GWK0 134 aa-6.32□□□□□ -3.42
LMBR1-222ENST00000638959 LINC00643Q86TS7 51 aa-6.32□□□□□ -3.42
LMBR1-222ENST00000638959 FAM107BQ9H098 131 aa-6.32□□□□□ -3.42
LMBR1-222ENST00000638959 S100A10P60903 97 aa-6.33□□□□□ -3.42
LMBR1-222ENST00000638959 NHSQ6T4R5 1651 aa-6.33□□□□□ -3.42
LMBR1-222ENST00000638959 AKAP12Q02952 1782 aa-6.34□□□□□ -3.42
LMBR1-222ENST00000638959 TTTY10Q9BZA0 68 aa-6.35□□□□□ -3.43
LMBR1-222ENST00000638959 SNRPFP62306 86 aaKnown RBP-6.36□□□□□ -3.43
LMBR1-222ENST00000638959 UACAQ9BZF9 1416 aa-6.36□□□□□ -3.43
LMBR1-222ENST00000638959 TTC37Q6PGP7 1564 aa-6.39□□□□□ -3.43
LMBR1-222ENST00000638959 RRBP1Q9P2E9 1410 aaKnown RBP-6.39□□□□□ -3.43
LMBR1-222ENST00000638959 A0A087WXM4 84 aa-6.39□□□□□ -3.43
LMBR1-222ENST00000638959 GYPAP02724 150 aa-6.39□□□□□ -3.43
LMBR1-222ENST00000638959 POLR2KP53803 58 aaKnown RBP-6.39□□□□□ -3.43
LMBR1-222ENST00000638959 ATP5EP2Q5VTU8 51 aa-6.4□□□□□ -3.43
LMBR1-222ENST00000638959 ENHOQ6UWT2 76 aa-6.41□□□□□ -3.44
LMBR1-222ENST00000638959 ABCC6O95255 1503 aa-6.43□□□□□ -3.44
LMBR1-222ENST00000638959 CEP162Q5TB80 1403 aa-6.43□□□□□ -3.44
LMBR1-222ENST00000638959 C20orf202A1L168 122 aa-6.44□□□□□ -3.44
LMBR1-222ENST00000638959 EIF2AK4Q9P2K8 1649 aaKnown RBP-6.46□□□□□ -3.44
LMBR1-222ENST00000638959 SMIM27A0A1W2PRY6 76 aa-6.46□□□□□ -3.44
LMBR1-222ENST00000638959 USP34Q70CQ2 3546 aa-6.46□□□□□ -3.44
LMBR1-222ENST00000638959 SMIM13P0DJ93 91 aa-6.48□□□□□ -3.45
LMBR1-222ENST00000638959 GLI2P10070 1586 aa-6.49□□□□□ -3.45
LMBR1-222ENST00000638959 MROH1Q8NDA8 1641 aa-6.5□□□□□ -3.45
LMBR1-222ENST00000638959 KDM5DQ9BY66 1539 aa-6.5□□□□□ -3.45
LMBR1-222ENST00000638959 WFDC10BQ8IUB3 73 aa-6.52□□□□□ -3.45
LMBR1-222ENST00000638959 DIP2AQ14689 1571 aa-6.53□□□□□ -3.46
LMBR1-222ENST00000638959 DEFB114Q30KQ6 69 aa-6.54□□□□□ -3.46
LMBR1-222ENST00000638959 DNAH12Q6ZR08 3092 aa-6.56□□□□□ -3.46
LMBR1-222ENST00000638959 NCMAPQ5T1S8 102 aa-6.57□□□□□ -3.46
LMBR1-222ENST00000638959 C2orf88Q9BSF0 95 aa-6.57□□□□□ -3.46
LMBR1-222ENST00000638959 ANKRD26Q9UPS8 1709 aa-6.58□□□□□ -3.46
LMBR1-222ENST00000638959 TIAM1Q13009 1591 aa-6.61□□□□□ -3.47
LMBR1-222ENST00000638959 C3P01024 1663 aa-6.62□□□□□ -3.47
LMBR1-222ENST00000638959 UNC80Q8N2C7 3258 aa-6.64□□□□□ -3.47
LMBR1-222ENST00000638959 S100A16Q96FQ6 103 aaKnown RBP-6.65□□□□□ -3.47
LMBR1-222ENST00000638959 PYY3Q5JQD4 70 aa-6.68□□□□□ -3.48
LMBR1-222ENST00000638959 KANTRA0A1W2PQU2 76 aa-6.69□□□□□ -3.48
LMBR1-222ENST00000638959 DEFB121Q5J5C9 76 aa-6.69□□□□□ -3.48
LMBR1-222ENST00000638959 HMGN1P05114 100 aa-6.7□□□□□ -3.48
LMBR1-222ENST00000638959 S100A12P80511 92 aa-6.7□□□□□ -3.48
LMBR1-222ENST00000638959 LMTK2Q8IWU2 1503 aa-6.71□□□□□ -3.48
LMBR1-222ENST00000638959 MADDQ8WXG6 1647 aa-6.74□□□□□ -3.49
LMBR1-222ENST00000638959 LINC00308Q8TCZ7 52 aa-6.75□□□□□ -3.49
LMBR1-222ENST00000638959 CNTLNQ9NXG0 1405 aa-6.77□□□□□ -3.49
LMBR1-222ENST00000638959 EFCAB10A6NFE3 127 aa-6.78□□□□□ -3.49
LMBR1-222ENST00000638959 DEFB131AP59861 70 aa-6.78□□□□□ -3.49
LMBR1-222ENST00000638959 TMEM167BQ9NRX6 74 aa-6.78□□□□□ -3.49
LMBR1-222ENST00000638959 LINC00587B1AMM8 73 aa-6.79□□□□□ -3.5
LMBR1-222ENST00000638959 NMES1Q9C002 83 aa-6.8□□□□□ -3.5
LMBR1-222ENST00000638959 KRTAP19-2Q3LHN2 52 aa-6.82□□□□□ -3.5
LMBR1-222ENST00000638959 NRXN3Q9Y4C0 1643 aa-6.83□□□□□ -3.5
LMBR1-222ENST00000638959 LOC400499M0QZD8 3231 aa-6.85□□□□□ -3.51
LMBR1-222ENST00000638959 H3BVH4 76 aa-6.86□□□□□ -3.51
LMBR1-222ENST00000638959 C14orf144Q96I85 54 aa-6.86□□□□□ -3.51
LMBR1-222ENST00000638959 TCEAL7Q9BRU2 100 aa-6.87□□□□□ -3.51
LMBR1-222ENST00000638959 CCDC180Q9P1Z9 1646 aa-6.87□□□□□ -3.51
LMBR1-222ENST00000638959 ASPMQ8IZT6 3477 aa-6.88□□□□□ -3.51
LMBR1-222ENST00000638959 VCANP13611 3396 aa-6.89□□□□□ -3.51
LMBR1-222ENST00000638959 K7EMI3 77 aa-6.9□□□□□ -3.51
LMBR1-222ENST00000638959 LMO7Q8WWI1 1683 aa-6.91□□□□□ -3.52
LMBR1-222ENST00000638959 ALS2Q96Q42 1657 aa-6.91□□□□□ -3.52
LMBR1-222ENST00000638959 XIRP2A4UGR9 3374 aa-6.91□□□□□ -3.52
LMBR1-222ENST00000638959 M0R143 59 aa-6.92□□□□□ -3.52
LMBR1-222ENST00000638959 SCRIBQ14160 1630 aa-6.94□□□□□ -3.52
LMBR1-222ENST00000638959 SNHG12Q9BXW3 62 aa-6.96□□□□□ -3.52
LMBR1-222ENST00000638959 MROH2AA6NES4 1674 aa-6.97□□□□□ -3.53
LMBR1-222ENST00000638959 ABCC3O15438 1527 aa-6.97□□□□□ -3.53
LMBR1-222ENST00000638959 EFCAB6Q5THR3 1501 aa-7□□□□□ -3.53
LMBR1-222ENST00000638959 ATP6V1G2-DDX39BF2Z307 99 aa-7□□□□□ -3.53
LMBR1-222ENST00000638959 CENPFP49454 3210 aa-7.01□□□□□ -3.53
LMBR1-222ENST00000638959 H3BUT2 72 aa-7.02□□□□□ -3.53
LMBR1-222ENST00000638959 ATXN8Q156A1 80 aa-7.02□□□□□ -3.53
LMBR1-222ENST00000638959 DEFB133Q30KQ1 61 aa-7.03□□□□□ -3.53
LMBR1-222ENST00000638959 TDRG1Q3Y452 100 aa-7.04□□□□□ -3.54
LMBR1-222ENST00000638959 M0R1W7 72 aa-7.07□□□□□ -3.54
LMBR1-222ENST00000638959 Q9H521 79 aa-7.08□□□□□ -3.54
LMBR1-222ENST00000638959 ST20Q9HBF5 79 aa-7.1□□□□□ -3.55
LMBR1-222ENST00000638959 ANKARQ7Z5J8 1434 aa-7.1□□□□□ -3.55
LMBR1-222ENST00000638959 ABCC1P33527 1531 aa-7.11□□□□□ -3.55
LMBR1-222ENST00000638959 ADIRFQ15847 76 aa-7.13□□□□□ -3.55
LMBR1-222ENST00000638959 CDH23Q9H251 3354 aa-7.14□□□□□ -3.55
LMBR1-222ENST00000638959 BRCA2P51587 3418 aa-7.15□□□□□ -3.55
LMBR1-222ENST00000638959 CD52P31358 61 aa-7.18□□□□□ -3.56
LMBR1-222ENST00000638959 PKIAP61925 76 aa-7.2□□□□□ -3.56
LMBR1-222ENST00000638959 SERF2P84101 59 aa-7.21□□□□□ -3.56
LMBR1-222ENST00000638959 SMIM2Q9BVW6 85 aa-7.22□□□□□ -3.57
LMBR1-222ENST00000638959 RHPN1-AS1Q9BWJ2 59 aa-7.24□□□□□ -3.57
LMBR1-222ENST00000638959 CFAP74Q9C0B2 1584 aa-7.25□□□□□ -3.57
LMBR1-222ENST00000638959 VPS8Q8N3P4 1428 aa-7.25□□□□□ -3.57
LMBR1-222ENST00000638959 SYCP2Q9BX26 1530 aa-7.25□□□□□ -3.57
LMBR1-222ENST00000638959 V9GYS6 101 aa-7.25□□□□□ -3.57
LMBR1-222ENST00000638959 S100ZQ8WXG8 99 aa-7.27□□□□□ -3.57
LMBR1-222ENST00000638959 GNG13Q9P2W3 67 aa-7.28□□□□□ -3.57
LMBR1-222ENST00000638959 C18orf32Q8TCD1 76 aa-7.29□□□□□ -3.58
LMBR1-222ENST00000638959 HTN1P15515 57 aa-7.31□□□□□ -3.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms