RNA–Protein interactions for RNA: ENST00000633151.1

LINC01002-222, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-222	ENST00000633151	RPL37	P61927	97 aa	Known RBP	2.82	□□□□□ -1.96
LINC01002-222	ENST00000633151	KRTAP4-3	Q9BYR4	195 aa		2.82	□□□□□ -1.96
LINC01002-222	ENST00000633151	ANK2	Q01484	3957 aa		2.81	□□□□□ -1.96
LINC01002-222	ENST00000633151	FASN	P49327	2511 aa	Known RBP	2.81	□□□□□ -1.96
LINC01002-222	ENST00000633151	FLNB	O75369	2602 aa	Known RBP	2.81	□□□□□ -1.96
LINC01002-222	ENST00000633151	MAST4	O15021	2626 aa		2.81	□□□□□ -1.96
LINC01002-222	ENST00000633151	CMYA5	Q8N3K9	4069 aa		2.8	□□□□□ -1.96
LINC01002-222	ENST00000633151	TRRAP	Q9Y4A5	3859 aa		2.8	□□□□□ -1.96
LINC01002-222	ENST00000633151		J3QKU1	62 aa		2.8	□□□□□ -1.96
LINC01002-222	ENST00000633151	TYMSOS	Q8TAI1	123 aa		2.8	□□□□□ -1.96
LINC01002-222	ENST00000633151	DNAH9	Q9NYC9	4486 aa		2.8	□□□□□ -1.96
LINC01002-222	ENST00000633151	USP24	Q9UPU5	2620 aa		2.79	□□□□□ -1.96
LINC01002-222	ENST00000633151	KRTAP13-2	Q52LG2	175 aa		2.79	□□□□□ -1.96
LINC01002-222	ENST00000633151	SPINT4	Q6UDR6	99 aa		2.79	□□□□□ -1.96
LINC01002-222	ENST00000633151	NBEAL1	Q6ZS30	2694 aa		2.79	□□□□□ -1.96
LINC01002-222	ENST00000633151	COL7A1	Q02388	2944 aa		2.79	□□□□□ -1.96
LINC01002-222	ENST00000633151	FRAS1	Q86XX4	4008 aa		2.78	□□□□□ -1.96
LINC01002-222	ENST00000633151	LYST	Q99698	3801 aa		2.78	□□□□□ -1.96
LINC01002-222	ENST00000633151	MEGF8	Q7Z7M0	2845 aa		2.78	□□□□□ -1.97
LINC01002-222	ENST00000633151	KRTAP9-6	A8MVA2	160 aa		2.77	□□□□□ -1.97
LINC01002-222	ENST00000633151	TPRXL	Q17RH7	258 aa		2.77	□□□□□ -1.97
LINC01002-222	ENST00000633151	CRIPT	Q9P021	101 aa		2.77	□□□□□ -1.97
LINC01002-222	ENST00000633151	PRKDC	P78527	4128 aa	Known RBP	2.76	□□□□□ -1.97
LINC01002-222	ENST00000633151	HECTD4	Q9Y4D8	3996 aa		2.75	□□□□□ -1.97
LINC01002-222	ENST00000633151	NDUFAF8	A1L188	74 aa		2.75	□□□□□ -1.97
LINC01002-222	ENST00000633151	DNAH6	Q9C0G6	4158 aa		2.75	□□□□□ -1.97
LINC01002-222	ENST00000633151	DNAH2	Q9P225	4427 aa		2.75	□□□□□ -1.97
LINC01002-222	ENST00000633151	KRTAP1-4	P0C5Y4	121 aa		2.74	□□□□□ -1.97
LINC01002-222	ENST00000633151	NOTCH1	P46531	2555 aa		2.74	□□□□□ -1.97
LINC01002-222	ENST00000633151	LCE3C	Q5T5A8	94 aa		2.73	□□□□□ -1.97
LINC01002-222	ENST00000633151	TG	P01266	2768 aa		2.73	□□□□□ -1.97
LINC01002-222	ENST00000633151	FLG2	Q5D862	2391 aa	Predicted RBP	2.72	□□□□□ -1.97
LINC01002-222	ENST00000633151	COL6A5	A8TX70	2615 aa		2.72	□□□□□ -1.97
LINC01002-222	ENST00000633151	DNAH7	Q8WXX0	4024 aa		2.72	□□□□□ -1.97
LINC01002-222	ENST00000633151	STAB2	Q8WWQ8	2551 aa		2.71	□□□□□ -1.98
LINC01002-222	ENST00000633151	DNAH11	Q96DT5	4516 aa		2.7	□□□□□ -1.98
LINC01002-222	ENST00000633151	PLEC	Q15149	4684 aa	Known RBP	2.7	□□□□□ -1.98
LINC01002-222	ENST00000633151		A0A1B0GVY2	172 aa		2.69	□□□□□ -1.98
LINC01002-222	ENST00000633151	SACS	Q9NZJ4	4579 aa		2.68	□□□□□ -1.98
LINC01002-222	ENST00000633151		S4R3F8	94 aa		2.67	□□□□□ -1.98
LINC01002-222	ENST00000633151	STAB1	Q9NY15	2570 aa		2.67	□□□□□ -1.98
LINC01002-222	ENST00000633151		M0QZ58	72 aa		2.66	□□□□□ -1.98
LINC01002-222	ENST00000633151	LUZP6	Q538Z0	58 aa		2.65	□□□□□ -1.99
LINC01002-222	ENST00000633151	KRTAP13-4	Q3LI77	160 aa		2.64	□□□□□ -1.99
LINC01002-222	ENST00000633151	LRP1B	Q9NZR2	4599 aa		2.63	□□□□□ -1.99
LINC01002-222	ENST00000633151	KRTAP12-1	P59990	96 aa		2.62	□□□□□ -1.99
LINC01002-222	ENST00000633151	CSMD3	Q7Z407	3707 aa		2.61	□□□□□ -1.99
LINC01002-222	ENST00000633151	C10orf95	Q9H7T3	257 aa		2.61	□□□□□ -1.99
LINC01002-222	ENST00000633151		A0A0D9SG42	100 aa		2.6	□□□□□ -1.99
LINC01002-222	ENST00000633151	KRTAP12-2	P59991	146 aa		2.6	□□□□□ -1.99
LINC01002-222	ENST00000633151	PLAC4	Q8WY50	150 aa		2.6	□□□□□ -1.99
LINC01002-222	ENST00000633151	MGAM2	Q2M2H8	2515 aa		2.6	□□□□□ -1.99
LINC01002-222	ENST00000633151	PKHD1L1	Q86WI1	4243 aa		2.59	□□□□□ -1.99
LINC01002-222	ENST00000633151	FBN3	Q75N90	2809 aa		2.59	□□□□□ -1.99
LINC01002-222	ENST00000633151	KRTAP5-8	O75690	187 aa		2.59	□□□□□ -1.99
LINC01002-222	ENST00000633151	KRTAP10-1	P60331	282 aa		2.59	□□□□□ -1.99
LINC01002-222	ENST00000633151	PP632	Q6XCG6	107 aa		2.59	□□□□□ -1.99
LINC01002-222	ENST00000633151	DNAH5	Q8TE73	4624 aa		2.59	□□□□□ -2
LINC01002-222	ENST00000633151	VPS13B	Q7Z7G8	4022 aa		2.57	□□□□□ -2
LINC01002-222	ENST00000633151	C9orf92	A6NGG3	77 aa		2.56	□□□□□ -2
LINC01002-222	ENST00000633151	PKD1	P98161	4303 aa		2.54	□□□□□ -2
LINC01002-222	ENST00000633151	CAMK2N1	Q7Z7J9	78 aa		2.53	□□□□□ -2
LINC01002-222	ENST00000633151	STARD9	Q9P2P6	4700 aa		2.52	□□□□□ -2.01
LINC01002-222	ENST00000633151	DMBT1	Q9UGM3	2413 aa	Predicted RBP	2.51	□□□□□ -2.01
LINC01002-222	ENST00000633151	KMT2A	Q03164	3969 aa		2.5	□□□□□ -2.01
LINC01002-222	ENST00000633151	LCE3E	Q5T5B0	92 aa		2.5	□□□□□ -2.01
LINC01002-222	ENST00000633151	DYNC1H1	Q14204	4646 aa	Known RBP	2.5	□□□□□ -2.01
LINC01002-222	ENST00000633151	PKHD1	P08F94	4074 aa		2.49	□□□□□ -2.01
LINC01002-222	ENST00000633151	FAT2	Q9NYQ8	4349 aa		2.49	□□□□□ -2.01
LINC01002-222	ENST00000633151	LRP1	Q07954	4544 aa	Known RBP	2.48	□□□□□ -2.01
LINC01002-222	ENST00000633151	APOB	P04114	4563 aa	Known RBP	2.48	□□□□□ -2.01
LINC01002-222	ENST00000633151	TNXB	P22105	4242 aa		2.47	□□□□□ -2.01
LINC01002-222	ENST00000633151	KRTAP10-4	P60372	401 aa	Predicted RBP	2.47	□□□□□ -2.01
LINC01002-222	ENST00000633151	HSPG2	P98160	4391 aa		2.47	□□□□□ -2.01
LINC01002-222	ENST00000633151	SPRR5	A0A1B0GTR4	108 aa		2.46	□□□□□ -2.02
LINC01002-222	ENST00000633151	KRTAP10-8	P60410	259 aa		2.45	□□□□□ -2.02
LINC01002-222	ENST00000633151	FAT3	Q8TDW7	4589 aa		2.44	□□□□□ -2.02
LINC01002-222	ENST00000633151	PRO2289	Q9P1D8	64 aa		2.43	□□□□□ -2.02
LINC01002-222	ENST00000633151	FAT1	Q14517	4588 aa		2.42	□□□□□ -2.02
LINC01002-222	ENST00000633151	INE1	O15225	51 aa		2.41	□□□□□ -2.02
LINC01002-222	ENST00000633151		R4GN34	69 aa		2.41	□□□□□ -2.02
LINC01002-222	ENST00000633151	MYCBP2	O75592	4640 aa		2.4	□□□□□ -2.03
LINC01002-222	ENST00000633151	LCE3A	Q5TA76	89 aa		2.36	□□□□□ -2.03
LINC01002-222	ENST00000633151	SMR3B	P02814	79 aa	Predicted RBP	2.35	□□□□□ -2.03
LINC01002-222	ENST00000633151	KRTAP21-3	Q3LHN1	58 aa		2.34	□□□□□ -2.03
LINC01002-222	ENST00000633151	TNP1	P09430	55 aa		2.33	□□□□□ -2.04
LINC01002-222	ENST00000633151		Q5VSD8	79 aa		2.33	□□□□□ -2.04
LINC01002-222	ENST00000633151	DNHD1	Q96M86	4753 aa		2.3	□□□□□ -2.04
LINC01002-222	ENST00000633151	HYDIN	Q4G0P3	5121 aa		2.27	□□□□□ -2.05
LINC01002-222	ENST00000633151	FLG	P20930	4061 aa	Predicted RBP	2.24	□□□□□ -2.05
LINC01002-222	ENST00000633151	MT1HL1	P0DM35	61 aa		2.23	□□□□□ -2.05
LINC01002-222	ENST00000633151	HMCN1	Q96RW7	5635 aa		2.22	□□□□□ -2.05
LINC01002-222	ENST00000633151	HERC1	Q15751	4861 aa		2.21	□□□□□ -2.06
LINC01002-222	ENST00000633151	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.2	□□□□□ -2.06
LINC01002-222	ENST00000633151	KRTAP19-2	Q3LHN2	52 aa		2.17	□□□□□ -2.06
LINC01002-222	ENST00000633151	RYR2	Q92736	4967 aa		2.16	□□□□□ -2.06
LINC01002-222	ENST00000633151	MUC17	Q685J3	4493 aa		2.16	□□□□□ -2.06
LINC01002-222	ENST00000633151	LRP2	P98164	4655 aa		2.16	□□□□□ -2.06
LINC01002-222	ENST00000633151	KRTAP8-1	Q8IUC2	63 aa		2.15	□□□□□ -2.07
LINC01002-222	ENST00000633151	KMT2C	Q8NEZ4	4911 aa	Known RBP	2.13	□□□□□ -2.07

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms