RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 KRTAP8-1Q8IUC2 63 aa8.48□□□□□ -1.05
FGFR1-241ENST00000619564 VPS13CQ709C8 3753 aa8.47□□□□□ -1.05
FGFR1-241ENST00000619564 ZNF469Q96JG9 3925 aaPredicted RBP8.25□□□□□ -1.09
FGFR1-241ENST00000619564 KRTAP10-5P60370 271 aa8.23□□□□□ -1.09
FGFR1-241ENST00000619564 MT1HP80294 61 aa8.21□□□□□ -1.09
FGFR1-241ENST00000619564 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
FGFR1-241ENST00000619564 KRTAP4-1Q9BYQ7 146 aa8.19□□□□□ -1.1
FGFR1-241ENST00000619564 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
FGFR1-241ENST00000619564 AKAP9Q99996 3911 aa8.15□□□□□ -1.1
FGFR1-241ENST00000619564 CSMD3Q7Z407 3707 aa8.12□□□□□ -1.11
FGFR1-241ENST00000619564 MT2AP02795 61 aa8.08□□□□□ -1.12
FGFR1-241ENST00000619564 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
FGFR1-241ENST00000619564 DNAH1Q9P2D7 4330 aa8.06□□□□□ -1.12
FGFR1-241ENST00000619564 DNAH10Q8IVF4 4471 aa8.04□□□□□ -1.12
FGFR1-241ENST00000619564 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
FGFR1-241ENST00000619564 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
FGFR1-241ENST00000619564 DNAH2Q9P225 4427 aa7.97□□□□□ -1.13
FGFR1-241ENST00000619564 MT1FP04733 61 aa7.88□□□□□ -1.15
FGFR1-241ENST00000619564 SPRR2FQ96RM1 72 aa7.88□□□□□ -1.15
FGFR1-241ENST00000619564 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.15
FGFR1-241ENST00000619564 FAT1Q14517 4588 aa7.76□□□□□ -1.17
FGFR1-241ENST00000619564 KRTAP19-5Q3LI72 72 aa7.76□□□□□ -1.17
FGFR1-241ENST00000619564 DNAH17Q9UFH2 4485 aa7.75□□□□□ -1.17
FGFR1-241ENST00000619564 DYNC1H1Q14204 4646 aaKnown RBP7.74□□□□□ -1.17
FGFR1-241ENST00000619564 VPS13DQ5THJ4 4388 aa7.73□□□□□ -1.17
FGFR1-241ENST00000619564 DNHD1Q96M86 4753 aa7.7□□□□□ -1.18
FGFR1-241ENST00000619564 LRP1BQ9NZR2 4599 aa7.65□□□□□ -1.19
FGFR1-241ENST00000619564 LCE3CQ5T5A8 94 aa7.62□□□□□ -1.19
FGFR1-241ENST00000619564 RYR1P21817 5038 aa7.62□□□□□ -1.19
FGFR1-241ENST00000619564 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.2
FGFR1-241ENST00000619564 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
FGFR1-241ENST00000619564 SACSQ9NZJ4 4579 aa7.56□□□□□ -1.2
FGFR1-241ENST00000619564 DYNC2H1Q8NCM8 4307 aaKnown RBP7.51□□□□□ -1.21
FGFR1-241ENST00000619564 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
FGFR1-241ENST00000619564 DNAH8Q96JB1 4490 aa7.45□□□□□ -1.22
FGFR1-241ENST00000619564 SPRR2EP22531 72 aa7.43□□□□□ -1.22
FGFR1-241ENST00000619564 SPRR2BP35325 72 aa7.43□□□□□ -1.22
FGFR1-241ENST00000619564 SPRR2AP35326 72 aa7.43□□□□□ -1.22
FGFR1-241ENST00000619564 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
FGFR1-241ENST00000619564 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.23
FGFR1-241ENST00000619564 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
FGFR1-241ENST00000619564 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
FGFR1-241ENST00000619564 ANK2Q01484 3957 aa7.34□□□□□ -1.23
FGFR1-241ENST00000619564 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
FGFR1-241ENST00000619564 KMT2AQ03164 3969 aa7.27□□□□□ -1.24
FGFR1-241ENST00000619564 RYR3Q15413 4870 aa7.27□□□□□ -1.25
FGFR1-241ENST00000619564 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.26
FGFR1-241ENST00000619564 SPRR2DP22532 72 aa7.2□□□□□ -1.26
FGFR1-241ENST00000619564 MT1XP80297 61 aa7.19□□□□□ -1.26
FGFR1-241ENST00000619564 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
FGFR1-241ENST00000619564 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
FGFR1-241ENST00000619564 VPS13BQ7Z7G8 4022 aa7.18□□□□□ -1.26
FGFR1-241ENST00000619564 FAT3Q8TDW7 4589 aa7.17□□□□□ -1.26
FGFR1-241ENST00000619564 LCE2BO14633 110 aa7.14□□□□□ -1.27
FGFR1-241ENST00000619564 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
FGFR1-241ENST00000619564 MT1BP07438 61 aa7.12□□□□□ -1.27
FGFR1-241ENST00000619564 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
FGFR1-241ENST00000619564 MT1GP13640 62 aa7.07□□□□□ -1.28
FGFR1-241ENST00000619564 HERC1Q15751 4861 aa7.06□□□□□ -1.28
FGFR1-241ENST00000619564 LYSTQ99698 3801 aa7.06□□□□□ -1.28
FGFR1-241ENST00000619564 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
FGFR1-241ENST00000619564 DNAH6Q9C0G6 4158 aa7.02□□□□□ -1.29
FGFR1-241ENST00000619564 RYR2Q92736 4967 aa7□□□□□ -1.29
FGFR1-241ENST00000619564 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
FGFR1-241ENST00000619564 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
FGFR1-241ENST00000619564 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
FGFR1-241ENST00000619564 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.3
FGFR1-241ENST00000619564 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
FGFR1-241ENST00000619564 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
FGFR1-241ENST00000619564 MYCBP2O75592 4640 aa6.91□□□□□ -1.3
FGFR1-241ENST00000619564 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
FGFR1-241ENST00000619564 HECTD4Q9Y4D8 3996 aa6.87□□□□□ -1.31
FGFR1-241ENST00000619564 HSPG2P98160 4391 aa6.85□□□□□ -1.31
FGFR1-241ENST00000619564 PKD1P98161 4303 aa6.77□□□□□ -1.33
FGFR1-241ENST00000619564 HYDINQ4G0P3 5121 aa6.75□□□□□ -1.33
FGFR1-241ENST00000619564 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
FGFR1-241ENST00000619564 LCE3DQ9BYE3 92 aa6.73□□□□□ -1.33
FGFR1-241ENST00000619564 BIRC6Q9NR09 4857 aa6.73□□□□□ -1.33
FGFR1-241ENST00000619564 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
FGFR1-241ENST00000619564 HERC2O95714 4834 aa6.71□□□□□ -1.34
FGFR1-241ENST00000619564 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
FGFR1-241ENST00000619564 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.35
FGFR1-241ENST00000619564 LCE3EQ5T5B0 92 aa6.62□□□□□ -1.35
FGFR1-241ENST00000619564 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.36
FGFR1-241ENST00000619564 MT1LQ93083 61 aa6.57□□□□□ -1.36
FGFR1-241ENST00000619564 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
FGFR1-241ENST00000619564 MT1EP04732 61 aa6.53□□□□□ -1.36
FGFR1-241ENST00000619564 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
FGFR1-241ENST00000619564 LRP2P98164 4655 aa6.47□□□□□ -1.37
FGFR1-241ENST00000619564 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.37
FGFR1-241ENST00000619564 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
FGFR1-241ENST00000619564 KRTAP9-2Q9BYQ4 174 aa6.36□□□□□ -1.39
FGFR1-241ENST00000619564 MT1MQ8N339 61 aa6.36□□□□□ -1.39
FGFR1-241ENST00000619564 LPAP08519 4548 aa6.35□□□□□ -1.39
FGFR1-241ENST00000619564 EPPK1P58107 5090 aaKnown RBP6.35□□□□□ -1.39
FGFR1-241ENST00000619564 MT3P25713 68 aa6.34□□□□□ -1.39
FGFR1-241ENST00000619564 MT4P47944 62 aa6.34□□□□□ -1.39
FGFR1-241ENST00000619564 KMT2CQ8NEZ4 4911 aaKnown RBP6.26□□□□□ -1.41
FGFR1-241ENST00000619564 TNXBP22105 4242 aa6.22□□□□□ -1.41
FGFR1-241ENST00000619564 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms