RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 LMTK2Q8IWU2 1503 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 HTTP42858 3142 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 HFM1A2PYH4 1435 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 ATMQ13315 3056 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 CMYA5Q8N3K9 4069 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 XIRP2A4UGR9 3374 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 DDX60LQ5H9U9 1706 aaKnown RBP-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 MYO5CQ9NQX4 1742 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 MMP24-AS1A0A0U1RRL7 71 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 LYNX1G3V0Z9 82 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 MT1AP04731 61 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 TNP1P09430 55 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 RPS27P42677 84 aaKnown RBP-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 CLPSL2Q6UWE3 100 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 RPS27LQ71UM5 84 aaKnown RBP-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 KCNQ1DNQ9H478 68 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 UGGT2Q9NYU1 1516 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 FRYQ5TBA9 3013 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 SPENQ96T58 3664 aaKnown RBP-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 TRIOO75962 3097 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 PRUNE2Q8WUY3 3088 aa-0.15□□□□□ -2.43
TARDBP-220ENST00000618606 GOLGB1Q14789 3259 aaKnown RBP-0.16□□□□□ -2.43
TARDBP-220ENST00000618606 DEPDC5O75140 1603 aa-0.16□□□□□ -2.43
TARDBP-220ENST00000618606 CENPEQ02224 2701 aa-0.16□□□□□ -2.43
TARDBP-220ENST00000618606 LINC01549A6NIU2 74 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 H3BUA1 57 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 K7EMI3 77 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 M0R1W7 72 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 PDCD5O14737 125 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 SPART-AS1P0CW21 52 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 WFDC10BQ8IUB3 73 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 NOP10Q9NPE3 64 aaKnown RBP-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 TJP1Q07157 1748 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 SPTBN5Q9NRC6 3674 aaKnown RBP-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 RALGAPBQ86X10 1494 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 FRYLO94915 3013 aa-0.16□□□□□ -2.44
TARDBP-220ENST00000618606 SMIM27A0A1W2PRY6 76 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 A8MTW9 85 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 M0QY20 66 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 CDC42BPGQ6DT37 1551 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 KRTAP8-1Q8IUC2 63 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 DNAH10Q8IVF4 4471 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 TRRAPQ9Y4A5 3859 aa-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.17□□□□□ -2.44
TARDBP-220ENST00000618606 ABCC6O95255 1503 aa-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 ASXL1Q8IXJ9 1541 aa-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 LINC00308Q8TCZ7 52 aa-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 NMES1Q9C002 83 aa-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 VPS13AQ96RL7 3174 aa-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 SMG1Q96Q15 3661 aaKnown RBP-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 KIAA0586Q9BVV6 1533 aa-0.18□□□□□ -2.44
TARDBP-220ENST00000618606 DNMBPQ6XZF7 1577 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 ANKRD36CQ5JPF3 1778 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 LINC01546A6NGU7 62 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 MT1HP80294 61 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 TFF3Q07654 80 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 KRTAP19-5Q3LI72 72 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 S100ZQ8WXG8 99 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 NRAPQ86VF7 1730 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 DUOX2Q9NRD8 1548 aa-0.19□□□□□ -2.44
TARDBP-220ENST00000618606 RNF17Q9BXT8 1623 aaKnown RBP-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 EEA1Q15075 1411 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 ITSN1Q15811 1721 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 PARP4Q9UKK3 1724 aaKnown RBP-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 M0QZ58 72 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 DEFB4AO15263 64 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 MT1GP13640 62 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 POLR2KP53803 58 aaKnown RBP-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 DEFB114Q30KQ6 69 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 TMEM167BQ9NRX6 74 aa-0.2□□□□□ -2.44
TARDBP-220ENST00000618606 TOGARAM1Q9Y4F4 1720 aa-0.21□□□□□ -2.44
TARDBP-220ENST00000618606 MT1BP07438 61 aa-0.21□□□□□ -2.44
TARDBP-220ENST00000618606 MT1HL1P0DM35 61 aa-0.21□□□□□ -2.44
TARDBP-220ENST00000618606 MT1XP80297 61 aa-0.21□□□□□ -2.44
TARDBP-220ENST00000618606 SERF2P84101 59 aa-0.21□□□□□ -2.44
TARDBP-220ENST00000618606 KIF1AQ12756 1690 aa-0.21□□□□□ -2.44
TARDBP-220ENST00000618606 EFCAB6Q5THR3 1501 aa-0.22□□□□□ -2.44
TARDBP-220ENST00000618606 ABCA9Q8IUA7 1624 aa-0.22□□□□□ -2.44
TARDBP-220ENST00000618606 SMIM5Q71RC9 77 aa-0.22□□□□□ -2.44
TARDBP-220ENST00000618606 ZC3H13Q5T200 1668 aaKnown RBP-0.22□□□□□ -2.44
TARDBP-220ENST00000618606 CPS1P31327 1500 aa-0.23□□□□□ -2.45
TARDBP-220ENST00000618606 MAST1Q9Y2H9 1570 aa-0.23□□□□□ -2.45
TARDBP-220ENST00000618606 ITSN2Q9NZM3 1697 aa-0.23□□□□□ -2.45
TARDBP-220ENST00000618606 LY75O60449 1722 aa-0.23□□□□□ -2.45
TARDBP-220ENST00000618606 H0YGX0 51 aa-0.23□□□□□ -2.45
TARDBP-220ENST00000618606 GLI2P10070 1586 aa-0.23□□□□□ -2.45
TARDBP-220ENST00000618606 MADDQ8WXG6 1647 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 DMDP11532 3685 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 CDC42BPAQ5VT25 1732 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 IGIPA6NJ69 53 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 MT1EP04732 61 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 PLNP26678 52 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 MT1LQ93083 61 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 LEAP2Q969E1 77 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 SMIM2Q9BVW6 85 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 CLASP1Q7Z460 1538 aa-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 THOC2Q8NI27 1593 aaKnown RBP-0.24□□□□□ -2.45
TARDBP-220ENST00000618606 A0A087WWC5 75 aa-0.25□□□□□ -2.45
TARDBP-220ENST00000618606 DEFB131AP59861 70 aa-0.25□□□□□ -2.45
TARDBP-220ENST00000618606 DEFB104AQ8WTQ1 72 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms