RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 DNAH11Q96DT5 4516 aa8.05□□□□□ -1.12
CDH23-212ENST00000616684 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
CDH23-212ENST00000616684 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
CDH23-212ENST00000616684 DNAH1Q9P2D7 4330 aa7.99□□□□□ -1.13
CDH23-212ENST00000616684 KRTAP12-3P60328 96 aa7.97□□□□□ -1.13
CDH23-212ENST00000616684 AKAP9Q99996 3911 aa7.96□□□□□ -1.13
CDH23-212ENST00000616684 DNAH10Q8IVF4 4471 aa7.94□□□□□ -1.14
CDH23-212ENST00000616684 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
CDH23-212ENST00000616684 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
CDH23-212ENST00000616684 INE1O15225 51 aa7.87□□□□□ -1.15
CDH23-212ENST00000616684 FAT1Q14517 4588 aa7.82□□□□□ -1.16
CDH23-212ENST00000616684 CRCT1Q9UGL9 99 aa7.82□□□□□ -1.16
CDH23-212ENST00000616684 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
CDH23-212ENST00000616684 VPS13DQ5THJ4 4388 aa7.8□□□□□ -1.16
CDH23-212ENST00000616684 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
CDH23-212ENST00000616684 DNAH17Q9UFH2 4485 aa7.78□□□□□ -1.16
CDH23-212ENST00000616684 DNAH8Q96JB1 4490 aa7.71□□□□□ -1.17
CDH23-212ENST00000616684 RYR1P21817 5038 aa7.71□□□□□ -1.17
CDH23-212ENST00000616684 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
CDH23-212ENST00000616684 STARD9Q9P2P6 4700 aa7.66□□□□□ -1.18
CDH23-212ENST00000616684 DNAH2Q9P225 4427 aa7.65□□□□□ -1.18
CDH23-212ENST00000616684 SACSQ9NZJ4 4579 aa7.59□□□□□ -1.19
CDH23-212ENST00000616684 MT1HP80294 61 aa7.55□□□□□ -1.2
CDH23-212ENST00000616684 MT2AP02795 61 aa7.51□□□□□ -1.21
CDH23-212ENST00000616684 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
CDH23-212ENST00000616684 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
CDH23-212ENST00000616684 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
CDH23-212ENST00000616684 DYNC2H1Q8NCM8 4307 aaKnown RBP7.45□□□□□ -1.22
CDH23-212ENST00000616684 KIAA1109Q2LD37 5005 aa7.43□□□□□ -1.22
CDH23-212ENST00000616684 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
CDH23-212ENST00000616684 APOBP04114 4563 aaKnown RBP7.41□□□□□ -1.22
CDH23-212ENST00000616684 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
CDH23-212ENST00000616684 MT1FP04733 61 aa7.36□□□□□ -1.23
CDH23-212ENST00000616684 DNAH3Q8TD57 4116 aa7.34□□□□□ -1.23
CDH23-212ENST00000616684 ANK2Q01484 3957 aa7.31□□□□□ -1.24
CDH23-212ENST00000616684 LYSTQ99698 3801 aa7.31□□□□□ -1.24
CDH23-212ENST00000616684 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
CDH23-212ENST00000616684 VPS13BQ7Z7G8 4022 aa7.29□□□□□ -1.24
CDH23-212ENST00000616684 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
CDH23-212ENST00000616684 RYR3Q15413 4870 aa7.25□□□□□ -1.25
CDH23-212ENST00000616684 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
CDH23-212ENST00000616684 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
CDH23-212ENST00000616684 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
CDH23-212ENST00000616684 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
CDH23-212ENST00000616684 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
CDH23-212ENST00000616684 RYR2Q92736 4967 aa7.03□□□□□ -1.28
CDH23-212ENST00000616684 LCE3CQ5T5A8 94 aa6.98□□□□□ -1.29
CDH23-212ENST00000616684 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
CDH23-212ENST00000616684 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.3
CDH23-212ENST00000616684 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
CDH23-212ENST00000616684 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
CDH23-212ENST00000616684 DNAH6Q9C0G6 4158 aa6.92□□□□□ -1.3
CDH23-212ENST00000616684 HERC2O95714 4834 aa6.91□□□□□ -1.3
CDH23-212ENST00000616684 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
CDH23-212ENST00000616684 LRP2P98164 4655 aa6.89□□□□□ -1.31
CDH23-212ENST00000616684 HECTD4Q9Y4D8 3996 aa6.85□□□□□ -1.31
CDH23-212ENST00000616684 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
CDH23-212ENST00000616684 MT1XP80297 61 aa6.8□□□□□ -1.32
CDH23-212ENST00000616684 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
CDH23-212ENST00000616684 MT1BP07438 61 aa6.77□□□□□ -1.33
CDH23-212ENST00000616684 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
CDH23-212ENST00000616684 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
CDH23-212ENST00000616684 PCLOQ9Y6V0 5065 aa6.7□□□□□ -1.34
CDH23-212ENST00000616684 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
CDH23-212ENST00000616684 PKD1P98161 4303 aa6.67□□□□□ -1.34
CDH23-212ENST00000616684 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
CDH23-212ENST00000616684 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
CDH23-212ENST00000616684 HSPG2P98160 4391 aa6.61□□□□□ -1.35
CDH23-212ENST00000616684 HERC1Q15751 4861 aa6.58□□□□□ -1.36
CDH23-212ENST00000616684 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
CDH23-212ENST00000616684 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
CDH23-212ENST00000616684 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
CDH23-212ENST00000616684 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
CDH23-212ENST00000616684 KMT2CQ8NEZ4 4911 aaKnown RBP6.48□□□□□ -1.37
CDH23-212ENST00000616684 LPAP08519 4548 aa6.44□□□□□ -1.38
CDH23-212ENST00000616684 MT1GP13640 62 aa6.44□□□□□ -1.38
CDH23-212ENST00000616684 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
CDH23-212ENST00000616684 SPRR2EP22531 72 aa6.42□□□□□ -1.38
CDH23-212ENST00000616684 SPRR2BP35325 72 aa6.42□□□□□ -1.38
CDH23-212ENST00000616684 SPRR2AP35326 72 aa6.42□□□□□ -1.38
CDH23-212ENST00000616684 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
CDH23-212ENST00000616684 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
CDH23-212ENST00000616684 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
CDH23-212ENST00000616684 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
CDH23-212ENST00000616684 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
CDH23-212ENST00000616684 LCE2BO14633 110 aa6.29□□□□□ -1.4
CDH23-212ENST00000616684 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
CDH23-212ENST00000616684 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
CDH23-212ENST00000616684 SPRR2DP22532 72 aa6.19□□□□□ -1.42
CDH23-212ENST00000616684 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
CDH23-212ENST00000616684 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
CDH23-212ENST00000616684 MT1LQ93083 61 aa6.15□□□□□ -1.43
CDH23-212ENST00000616684 TNXBP22105 4242 aa6.14□□□□□ -1.43
CDH23-212ENST00000616684 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
CDH23-212ENST00000616684 MT1EP04732 61 aa6.1□□□□□ -1.43
CDH23-212ENST00000616684 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
CDH23-212ENST00000616684 LCE3DQ9BYE3 92 aa6.07□□□□□ -1.44
CDH23-212ENST00000616684 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
CDH23-212ENST00000616684 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
CDH23-212ENST00000616684 LCE3EQ5T5B0 92 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms