RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 ANK2Q01484 3957 aa4.01□□□□□ -1.77
SPTBN1-207ENST00000615901 DNAH1Q9P2D7 4330 aa4□□□□□ -1.77
SPTBN1-207ENST00000615901 DNAH3Q8TD57 4116 aa4□□□□□ -1.77
SPTBN1-207ENST00000615901 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
SPTBN1-207ENST00000615901 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SPTBN1-207ENST00000615901 DNAH6Q9C0G6 4158 aa3.9□□□□□ -1.78
SPTBN1-207ENST00000615901 DNAH9Q9NYC9 4486 aa3.89□□□□□ -1.79
SPTBN1-207ENST00000615901 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
SPTBN1-207ENST00000615901 LYSTQ99698 3801 aa3.87□□□□□ -1.79
SPTBN1-207ENST00000615901 CMYA5Q8N3K9 4069 aa3.86□□□□□ -1.79
SPTBN1-207ENST00000615901 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
SPTBN1-207ENST00000615901 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
SPTBN1-207ENST00000615901 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
SPTBN1-207ENST00000615901 LORP23490 312 aaPredicted RBP3.81□□□□□ -1.8
SPTBN1-207ENST00000615901 VPS13DQ5THJ4 4388 aa3.78□□□□□ -1.8
SPTBN1-207ENST00000615901 DNAH2Q9P225 4427 aa3.78□□□□□ -1.81
SPTBN1-207ENST00000615901 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
SPTBN1-207ENST00000615901 DNAH11Q96DT5 4516 aa3.74□□□□□ -1.81
SPTBN1-207ENST00000615901 PLECQ15149 4684 aaKnown RBP3.74□□□□□ -1.81
SPTBN1-207ENST00000615901 MT1HP80294 61 aa3.74□□□□□ -1.81
SPTBN1-207ENST00000615901 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
SPTBN1-207ENST00000615901 PRKDCP78527 4128 aaKnown RBP3.73□□□□□ -1.81
SPTBN1-207ENST00000615901 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
SPTBN1-207ENST00000615901 DNAH17Q9UFH2 4485 aa3.72□□□□□ -1.81
SPTBN1-207ENST00000615901 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
SPTBN1-207ENST00000615901 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
SPTBN1-207ENST00000615901 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
SPTBN1-207ENST00000615901 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
SPTBN1-207ENST00000615901 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
SPTBN1-207ENST00000615901 FRAS1Q86XX4 4008 aa3.69□□□□□ -1.82
SPTBN1-207ENST00000615901 MT2AP02795 61 aa3.68□□□□□ -1.82
SPTBN1-207ENST00000615901 KMT2AQ03164 3969 aa3.67□□□□□ -1.82
SPTBN1-207ENST00000615901 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
SPTBN1-207ENST00000615901 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
SPTBN1-207ENST00000615901 DNHD1Q96M86 4753 aa3.63□□□□□ -1.83
SPTBN1-207ENST00000615901 MT1FP04733 61 aa3.59□□□□□ -1.83
SPTBN1-207ENST00000615901 DNAH8Q96JB1 4490 aa3.56□□□□□ -1.84
SPTBN1-207ENST00000615901 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
SPTBN1-207ENST00000615901 RYR3Q15413 4870 aa3.52□□□□□ -1.85
SPTBN1-207ENST00000615901 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
SPTBN1-207ENST00000615901 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
SPTBN1-207ENST00000615901 RYR1P21817 5038 aa3.48□□□□□ -1.85
SPTBN1-207ENST00000615901 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
SPTBN1-207ENST00000615901 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
SPTBN1-207ENST00000615901 SACSQ9NZJ4 4579 aa3.46□□□□□ -1.86
SPTBN1-207ENST00000615901 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
SPTBN1-207ENST00000615901 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
SPTBN1-207ENST00000615901 RYR2Q92736 4967 aa3.4□□□□□ -1.86
SPTBN1-207ENST00000615901 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.87
SPTBN1-207ENST00000615901 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
SPTBN1-207ENST00000615901 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
SPTBN1-207ENST00000615901 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
SPTBN1-207ENST00000615901 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
SPTBN1-207ENST00000615901 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
SPTBN1-207ENST00000615901 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
SPTBN1-207ENST00000615901 FAT1Q14517 4588 aa3.35□□□□□ -1.87
SPTBN1-207ENST00000615901 MT1XP80297 61 aa3.35□□□□□ -1.87
SPTBN1-207ENST00000615901 PCLOQ9Y6V0 5065 aa3.33□□□□□ -1.88
SPTBN1-207ENST00000615901 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
SPTBN1-207ENST00000615901 KRTAP9-8Q9BYQ0 159 aa3.28□□□□□ -1.88
SPTBN1-207ENST00000615901 MT1BP07438 61 aa3.28□□□□□ -1.88
SPTBN1-207ENST00000615901 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
SPTBN1-207ENST00000615901 HSPG2P98160 4391 aa3.26□□□□□ -1.89
SPTBN1-207ENST00000615901 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
SPTBN1-207ENST00000615901 PKD1P98161 4303 aa3.25□□□□□ -1.89
SPTBN1-207ENST00000615901 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
SPTBN1-207ENST00000615901 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
SPTBN1-207ENST00000615901 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
SPTBN1-207ENST00000615901 SPRR2EP22531 72 aa3.21□□□□□ -1.9
SPTBN1-207ENST00000615901 SPRR2BP35325 72 aa3.21□□□□□ -1.9
SPTBN1-207ENST00000615901 SPRR2AP35326 72 aa3.21□□□□□ -1.9
SPTBN1-207ENST00000615901 HERC1Q15751 4861 aa3.19□□□□□ -1.9
SPTBN1-207ENST00000615901 TNXBP22105 4242 aa3.17□□□□□ -1.9
SPTBN1-207ENST00000615901 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
SPTBN1-207ENST00000615901 MT1GP13640 62 aa3.15□□□□□ -1.9
SPTBN1-207ENST00000615901 KRTAP19-2Q3LHN2 52 aa3.15□□□□□ -1.91
SPTBN1-207ENST00000615901 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
SPTBN1-207ENST00000615901 SPRR2DP22532 72 aa3.13□□□□□ -1.91
SPTBN1-207ENST00000615901 LCE2BO14633 110 aa3.12□□□□□ -1.91
SPTBN1-207ENST00000615901 MT3P25713 68 aa3.11□□□□□ -1.91
SPTBN1-207ENST00000615901 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
SPTBN1-207ENST00000615901 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
SPTBN1-207ENST00000615901 HERC2O95714 4834 aa3.08□□□□□ -1.92
SPTBN1-207ENST00000615901 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
SPTBN1-207ENST00000615901 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
SPTBN1-207ENST00000615901 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
SPTBN1-207ENST00000615901 MT1LQ93083 61 aa3.04□□□□□ -1.92
SPTBN1-207ENST00000615901 LRP2P98164 4655 aa3.03□□□□□ -1.92
SPTBN1-207ENST00000615901 MT1EP04732 61 aa3.02□□□□□ -1.93
SPTBN1-207ENST00000615901 MUC17Q685J3 4493 aa3□□□□□ -1.93
SPTBN1-207ENST00000615901 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
SPTBN1-207ENST00000615901 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
SPTBN1-207ENST00000615901 KMT2CQ8NEZ4 4911 aaKnown RBP2.95□□□□□ -1.94
SPTBN1-207ENST00000615901 MT1MQ8N339 61 aa2.92□□□□□ -1.94
SPTBN1-207ENST00000615901 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
SPTBN1-207ENST00000615901 RNF213Q63HN8 5207 aa2.91□□□□□ -1.94
SPTBN1-207ENST00000615901 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
SPTBN1-207ENST00000615901 LCE2DQ5TA82 110 aaPredicted RBP2.89□□□□□ -1.95
SPTBN1-207ENST00000615901 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
SPTBN1-207ENST00000615901 LPAP08519 4548 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms