RNA–Protein interactions for RNA: ENST00000611640.4

KDM4B-211, Transcript of lysine demethylase 4B, humanhuman

TSL 5 BASIC

Gene KDM4B, Length 5,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-211ENST00000611640 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
KDM4B-211ENST00000611640 ANK2Q01484 3957 aa7.09□□□□□ -1.27
KDM4B-211ENST00000611640 LCE3AQ5TA76 89 aa7.09□□□□□ -1.27
KDM4B-211ENST00000611640 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
KDM4B-211ENST00000611640 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
KDM4B-211ENST00000611640 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
KDM4B-211ENST00000611640 LYSTQ99698 3801 aa6.97□□□□□ -1.29
KDM4B-211ENST00000611640 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
KDM4B-211ENST00000611640 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
KDM4B-211ENST00000611640 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
KDM4B-211ENST00000611640 DNAH5Q8TE73 4624 aa6.91□□□□□ -1.3
KDM4B-211ENST00000611640 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
KDM4B-211ENST00000611640 DNAH3Q8TD57 4116 aa6.79□□□□□ -1.32
KDM4B-211ENST00000611640 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
KDM4B-211ENST00000611640 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
KDM4B-211ENST00000611640 DNAH17Q9UFH2 4485 aa6.75□□□□□ -1.33
KDM4B-211ENST00000611640 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
KDM4B-211ENST00000611640 DNAH11Q96DT5 4516 aa6.74□□□□□ -1.33
KDM4B-211ENST00000611640 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.34
KDM4B-211ENST00000611640 FRAS1Q86XX4 4008 aa6.7□□□□□ -1.34
KDM4B-211ENST00000611640 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
KDM4B-211ENST00000611640 MT1HP80294 61 aa6.6□□□□□ -1.35
KDM4B-211ENST00000611640 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
KDM4B-211ENST00000611640 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
KDM4B-211ENST00000611640 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
KDM4B-211ENST00000611640 MT2AP02795 61 aa6.53□□□□□ -1.36
KDM4B-211ENST00000611640 LRP1BQ9NZR2 4599 aa6.53□□□□□ -1.36
KDM4B-211ENST00000611640 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
KDM4B-211ENST00000611640 DNHD1Q96M86 4753 aa6.5□□□□□ -1.37
KDM4B-211ENST00000611640 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
KDM4B-211ENST00000611640 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
KDM4B-211ENST00000611640 DNAH8Q96JB1 4490 aa6.5□□□□□ -1.37
KDM4B-211ENST00000611640 STARD9Q9P2P6 4700 aa6.48□□□□□ -1.37
KDM4B-211ENST00000611640 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
KDM4B-211ENST00000611640 FAT1Q14517 4588 aa6.47□□□□□ -1.37
KDM4B-211ENST00000611640 FAT2Q9NYQ8 4349 aa6.45□□□□□ -1.38
KDM4B-211ENST00000611640 MT1FP04733 61 aa6.41□□□□□ -1.38
KDM4B-211ENST00000611640 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
KDM4B-211ENST00000611640 PRKDCP78527 4128 aaKnown RBP6.34□□□□□ -1.4
KDM4B-211ENST00000611640 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
KDM4B-211ENST00000611640 RYR1P21817 5038 aa6.29□□□□□ -1.4
KDM4B-211ENST00000611640 APOBP04114 4563 aaKnown RBP6.28□□□□□ -1.4
KDM4B-211ENST00000611640 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
KDM4B-211ENST00000611640 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
KDM4B-211ENST00000611640 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
KDM4B-211ENST00000611640 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
KDM4B-211ENST00000611640 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.44
KDM4B-211ENST00000611640 PKD1P98161 4303 aa6.09□□□□□ -1.44
KDM4B-211ENST00000611640 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
KDM4B-211ENST00000611640 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
KDM4B-211ENST00000611640 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
KDM4B-211ENST00000611640 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
KDM4B-211ENST00000611640 RYR3Q15413 4870 aa6.03□□□□□ -1.44
KDM4B-211ENST00000611640 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
KDM4B-211ENST00000611640 MYCBP2O75592 4640 aa5.99□□□□□ -1.45
KDM4B-211ENST00000611640 MT1XP80297 61 aa5.96□□□□□ -1.46
KDM4B-211ENST00000611640 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
KDM4B-211ENST00000611640 PKHD1P08F94 4074 aa5.92□□□□□ -1.46
KDM4B-211ENST00000611640 MT1BP07438 61 aa5.88□□□□□ -1.47
KDM4B-211ENST00000611640 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
KDM4B-211ENST00000611640 RYR2Q92736 4967 aa5.87□□□□□ -1.47
KDM4B-211ENST00000611640 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
KDM4B-211ENST00000611640 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
KDM4B-211ENST00000611640 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
KDM4B-211ENST00000611640 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
KDM4B-211ENST00000611640 MT1GP13640 62 aa5.73□□□□□ -1.49
KDM4B-211ENST00000611640 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
KDM4B-211ENST00000611640 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
KDM4B-211ENST00000611640 HSPG2P98160 4391 aa5.7□□□□□ -1.5
KDM4B-211ENST00000611640 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
KDM4B-211ENST00000611640 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
KDM4B-211ENST00000611640 SPRR2EP22531 72 aa5.69□□□□□ -1.5
KDM4B-211ENST00000611640 SPRR2BP35325 72 aa5.69□□□□□ -1.5
KDM4B-211ENST00000611640 SPRR2AP35326 72 aa5.69□□□□□ -1.5
KDM4B-211ENST00000611640 HERC1Q15751 4861 aa5.69□□□□□ -1.5
KDM4B-211ENST00000611640 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
KDM4B-211ENST00000611640 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
KDM4B-211ENST00000611640 TNXBP22105 4242 aa5.62□□□□□ -1.51
KDM4B-211ENST00000611640 HERC2O95714 4834 aa5.61□□□□□ -1.51
KDM4B-211ENST00000611640 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
KDM4B-211ENST00000611640 LRP2P98164 4655 aa5.59□□□□□ -1.51
KDM4B-211ENST00000611640 LPAP08519 4548 aa5.52□□□□□ -1.53
KDM4B-211ENST00000611640 LCE2BO14633 110 aa5.51□□□□□ -1.53
KDM4B-211ENST00000611640 SPRR2DP22532 72 aa5.5□□□□□ -1.53
KDM4B-211ENST00000611640 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
KDM4B-211ENST00000611640 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.53
KDM4B-211ENST00000611640 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
KDM4B-211ENST00000611640 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
KDM4B-211ENST00000611640 MT1LQ93083 61 aa5.41□□□□□ -1.54
KDM4B-211ENST00000611640 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
KDM4B-211ENST00000611640 LCE3EQ5T5B0 92 aa5.37□□□□□ -1.55
KDM4B-211ENST00000611640 MT1EP04732 61 aa5.35□□□□□ -1.55
KDM4B-211ENST00000611640 EPPK1P58107 5090 aaKnown RBP5.3□□□□□ -1.56
KDM4B-211ENST00000611640 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
KDM4B-211ENST00000611640 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
KDM4B-211ENST00000611640 MT1MQ8N339 61 aa5.17□□□□□ -1.58
KDM4B-211ENST00000611640 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
KDM4B-211ENST00000611640 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.59
KDM4B-211ENST00000611640 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
KDM4B-211ENST00000611640 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms