RNA–Protein interactions for RNA: ENST00000597389.5

SPTBN4-211, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5

Gene SPTBN4, Length 5,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-211ENST00000597389 KRTAP8-1Q8IUC2 63 aa8.46□□□□□ -1.06
SPTBN4-211ENST00000597389 VPS13CQ709C8 3753 aa8.45□□□□□ -1.06
SPTBN4-211ENST00000597389 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
SPTBN4-211ENST00000597389 KRTAP23-1A1A580 65 aa8.28□□□□□ -1.08
SPTBN4-211ENST00000597389 AKAP9Q99996 3911 aa8.24□□□□□ -1.09
SPTBN4-211ENST00000597389 CSMD3Q7Z407 3707 aa8.18□□□□□ -1.1
SPTBN4-211ENST00000597389 MT1HP80294 61 aa8.07□□□□□ -1.12
SPTBN4-211ENST00000597389 KRTAP4-1Q9BYQ7 146 aa8.05□□□□□ -1.12
SPTBN4-211ENST00000597389 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
SPTBN4-211ENST00000597389 DNAH1Q9P2D7 4330 aa8□□□□□ -1.13
SPTBN4-211ENST00000597389 DNAH5Q8TE73 4624 aa7.94□□□□□ -1.14
SPTBN4-211ENST00000597389 ZNF469Q96JG9 3925 aaPredicted RBP7.91□□□□□ -1.14
SPTBN4-211ENST00000597389 MT2AP02795 61 aa7.9□□□□□ -1.14
SPTBN4-211ENST00000597389 SPRR2FQ96RM1 72 aa7.89□□□□□ -1.15
SPTBN4-211ENST00000597389 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
SPTBN4-211ENST00000597389 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
SPTBN4-211ENST00000597389 DNAH2Q9P225 4427 aa7.8□□□□□ -1.16
SPTBN4-211ENST00000597389 PLECQ15149 4684 aaKnown RBP7.75□□□□□ -1.17
SPTBN4-211ENST00000597389 MT1FP04733 61 aa7.74□□□□□ -1.17
SPTBN4-211ENST00000597389 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
SPTBN4-211ENST00000597389 KRTAP19-5Q3LI72 72 aa7.72□□□□□ -1.17
SPTBN4-211ENST00000597389 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
SPTBN4-211ENST00000597389 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
SPTBN4-211ENST00000597389 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
SPTBN4-211ENST00000597389 DNAH8Q96JB1 4490 aa7.67□□□□□ -1.18
SPTBN4-211ENST00000597389 VPS13DQ5THJ4 4388 aa7.6□□□□□ -1.19
SPTBN4-211ENST00000597389 LCE3CQ5T5A8 94 aa7.53□□□□□ -1.2
SPTBN4-211ENST00000597389 ANK2Q01484 3957 aa7.52□□□□□ -1.21
SPTBN4-211ENST00000597389 FAT1Q14517 4588 aa7.48□□□□□ -1.21
SPTBN4-211ENST00000597389 SPRR2EP22531 72 aa7.47□□□□□ -1.21
SPTBN4-211ENST00000597389 SPRR2BP35325 72 aa7.47□□□□□ -1.21
SPTBN4-211ENST00000597389 SPRR2AP35326 72 aa7.47□□□□□ -1.21
SPTBN4-211ENST00000597389 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
SPTBN4-211ENST00000597389 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
SPTBN4-211ENST00000597389 LRP1BQ9NZR2 4599 aa7.43□□□□□ -1.22
SPTBN4-211ENST00000597389 SACSQ9NZJ4 4579 aa7.42□□□□□ -1.22
SPTBN4-211ENST00000597389 DYNC2H1Q8NCM8 4307 aaKnown RBP7.4□□□□□ -1.22
SPTBN4-211ENST00000597389 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.23
SPTBN4-211ENST00000597389 FRAS1Q86XX4 4008 aa7.35□□□□□ -1.23
SPTBN4-211ENST00000597389 DNHD1Q96M86 4753 aa7.32□□□□□ -1.24
SPTBN4-211ENST00000597389 RYR1P21817 5038 aa7.29□□□□□ -1.24
SPTBN4-211ENST00000597389 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
SPTBN4-211ENST00000597389 KMT2AQ03164 3969 aa7.25□□□□□ -1.25
SPTBN4-211ENST00000597389 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
SPTBN4-211ENST00000597389 SPRR2DP22532 72 aa7.22□□□□□ -1.25
SPTBN4-211ENST00000597389 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.26
SPTBN4-211ENST00000597389 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.26
SPTBN4-211ENST00000597389 DNAH7Q8WXX0 4024 aa7.18□□□□□ -1.26
SPTBN4-211ENST00000597389 DNAH6Q9C0G6 4158 aa7.14□□□□□ -1.27
SPTBN4-211ENST00000597389 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
SPTBN4-211ENST00000597389 MT1GP13640 62 aa7.11□□□□□ -1.27
SPTBN4-211ENST00000597389 LCE2BO14633 110 aa7.11□□□□□ -1.27
SPTBN4-211ENST00000597389 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
SPTBN4-211ENST00000597389 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
SPTBN4-211ENST00000597389 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
SPTBN4-211ENST00000597389 MT1XP80297 61 aa7.02□□□□□ -1.28
SPTBN4-211ENST00000597389 KRTAP17-1Q9BYP8 105 aa7.01□□□□□ -1.29
SPTBN4-211ENST00000597389 RYR3Q15413 4870 aa6.99□□□□□ -1.29
SPTBN4-211ENST00000597389 KRTAP12-4P60329 112 aa6.97□□□□□ -1.29
SPTBN4-211ENST00000597389 LYSTQ99698 3801 aa6.97□□□□□ -1.29
SPTBN4-211ENST00000597389 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
SPTBN4-211ENST00000597389 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
SPTBN4-211ENST00000597389 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
SPTBN4-211ENST00000597389 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
SPTBN4-211ENST00000597389 MT1BP07438 61 aa6.91□□□□□ -1.3
SPTBN4-211ENST00000597389 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
SPTBN4-211ENST00000597389 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
SPTBN4-211ENST00000597389 MYCBP2O75592 4640 aa6.73□□□□□ -1.33
SPTBN4-211ENST00000597389 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
SPTBN4-211ENST00000597389 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
SPTBN4-211ENST00000597389 HERC1Q15751 4861 aa6.69□□□□□ -1.34
SPTBN4-211ENST00000597389 LCE3DQ9BYE3 92 aa6.69□□□□□ -1.34
SPTBN4-211ENST00000597389 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
SPTBN4-211ENST00000597389 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
SPTBN4-211ENST00000597389 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
SPTBN4-211ENST00000597389 RYR2Q92736 4967 aa6.58□□□□□ -1.36
SPTBN4-211ENST00000597389 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
SPTBN4-211ENST00000597389 LCE3EQ5T5B0 92 aa6.54□□□□□ -1.36
SPTBN4-211ENST00000597389 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
SPTBN4-211ENST00000597389 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
SPTBN4-211ENST00000597389 PKD1P98161 4303 aa6.5□□□□□ -1.37
SPTBN4-211ENST00000597389 HSPG2P98160 4391 aa6.48□□□□□ -1.37
SPTBN4-211ENST00000597389 MT4P47944 62 aa6.46□□□□□ -1.38
SPTBN4-211ENST00000597389 LPAP08519 4548 aa6.46□□□□□ -1.38
SPTBN4-211ENST00000597389 MT1LQ93083 61 aa6.41□□□□□ -1.38
SPTBN4-211ENST00000597389 HYDINQ4G0P3 5121 aa6.37□□□□□ -1.39
SPTBN4-211ENST00000597389 MT1EP04732 61 aa6.36□□□□□ -1.39
SPTBN4-211ENST00000597389 HERC2O95714 4834 aa6.3□□□□□ -1.4
SPTBN4-211ENST00000597389 TNXBP22105 4242 aa6.3□□□□□ -1.4
SPTBN4-211ENST00000597389 BIRC6Q9NR09 4857 aa6.3□□□□□ -1.4
SPTBN4-211ENST00000597389 LRP2P98164 4655 aa6.28□□□□□ -1.4
SPTBN4-211ENST00000597389 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
SPTBN4-211ENST00000597389 PCLOQ9Y6V0 5065 aa6.25□□□□□ -1.41
SPTBN4-211ENST00000597389 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
SPTBN4-211ENST00000597389 MT1MQ8N339 61 aa6.22□□□□□ -1.41
SPTBN4-211ENST00000597389 MT3P25713 68 aa6.22□□□□□ -1.41
SPTBN4-211ENST00000597389 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
SPTBN4-211ENST00000597389 LCE1BQ5T7P3 118 aa6.19□□□□□ -1.42
SPTBN4-211ENST00000597389 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
SPTBN4-211ENST00000597389 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms