RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 Q5W150 140 aa3.46□□□□□ -1.86
NPC1-213ENST00000591955 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
NPC1-213ENST00000591955 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
NPC1-213ENST00000591955 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
NPC1-213ENST00000591955 IGLV9-49A0A0B4J1Y8 123 aa3.43□□□□□ -1.86
NPC1-213ENST00000591955 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
NPC1-213ENST00000591955 IGLV5-52A0A0A0MRZ9 124 aa3.42□□□□□ -1.86
NPC1-213ENST00000591955 NUPR2A6NF83 97 aa3.4□□□□□ -1.87
NPC1-213ENST00000591955 CHTF8P0CG12 524 aa3.4□□□□□ -1.87
NPC1-213ENST00000591955 DNAH10Q8IVF4 4471 aa3.39□□□□□ -1.87
NPC1-213ENST00000591955 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
NPC1-213ENST00000591955 PANO1I0J062 215 aa3.38□□□□□ -1.87
NPC1-213ENST00000591955 A0A1B0GU33 70 aa3.37□□□□□ -1.87
NPC1-213ENST00000591955 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
NPC1-213ENST00000591955 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
NPC1-213ENST00000591955 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
NPC1-213ENST00000591955 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NPC1-213ENST00000591955 UBE2DNLQ8IWF7 75 aa3.35□□□□□ -1.87
NPC1-213ENST00000591955 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
NPC1-213ENST00000591955 SPINK6Q6UWN8 80 aa3.34□□□□□ -1.87
NPC1-213ENST00000591955 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
NPC1-213ENST00000591955 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
NPC1-213ENST00000591955 KRTAP16-1A8MUX0 517 aa3.32□□□□□ -1.88
NPC1-213ENST00000591955 H0YAA0 97 aa3.32□□□□□ -1.88
NPC1-213ENST00000591955 Q6ZSA8 131 aa3.32□□□□□ -1.88
NPC1-213ENST00000591955 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
NPC1-213ENST00000591955 PKHD1P08F94 4074 aa3.31□□□□□ -1.88
NPC1-213ENST00000591955 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
NPC1-213ENST00000591955 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
NPC1-213ENST00000591955 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
NPC1-213ENST00000591955 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
NPC1-213ENST00000591955 HERC1Q15751 4861 aa3.3□□□□□ -1.88
NPC1-213ENST00000591955 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
NPC1-213ENST00000591955 CIRBP-AS1Q8TBR5 109 aa3.29□□□□□ -1.88
NPC1-213ENST00000591955 PSORS1C2Q9UIG4 136 aa3.29□□□□□ -1.88
NPC1-213ENST00000591955 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
NPC1-213ENST00000591955 DNAH6Q9C0G6 4158 aa3.29□□□□□ -1.88
NPC1-213ENST00000591955 HSPG2P98160 4391 aa3.28□□□□□ -1.88
NPC1-213ENST00000591955 A0A1B0GVY2 172 aa3.28□□□□□ -1.88
NPC1-213ENST00000591955 RPS29P62273 56 aaKnown RBP3.28□□□□□ -1.88
NPC1-213ENST00000591955 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
NPC1-213ENST00000591955 VPS13DQ5THJ4 4388 aa3.28□□□□□ -1.89
NPC1-213ENST00000591955 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
NPC1-213ENST00000591955 P0C880 135 aa3.27□□□□□ -1.89
NPC1-213ENST00000591955 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
NPC1-213ENST00000591955 CRIPTQ9P021 101 aa3.26□□□□□ -1.89
NPC1-213ENST00000591955 A0A087WTM6 91 aa3.25□□□□□ -1.89
NPC1-213ENST00000591955 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
NPC1-213ENST00000591955 SPINK1P00995 79 aa3.24□□□□□ -1.89
NPC1-213ENST00000591955 APLNQ9ULZ1 77 aa3.24□□□□□ -1.89
NPC1-213ENST00000591955 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
NPC1-213ENST00000591955 PKD1P98161 4303 aa3.23□□□□□ -1.89
NPC1-213ENST00000591955 Q6ZRN7 208 aaPredicted RBP3.23□□□□□ -1.89
NPC1-213ENST00000591955 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
NPC1-213ENST00000591955 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
NPC1-213ENST00000591955 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
NPC1-213ENST00000591955 APOBP04114 4563 aaKnown RBP3.2□□□□□ -1.9
NPC1-213ENST00000591955 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
NPC1-213ENST00000591955 TYMSOSQ8TAI1 123 aa3.19□□□□□ -1.9
NPC1-213ENST00000591955 LRP1BQ9NZR2 4599 aa3.17□□□□□ -1.9
NPC1-213ENST00000591955 MYCBP2O75592 4640 aa3.17□□□□□ -1.9
NPC1-213ENST00000591955 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
NPC1-213ENST00000591955 SEC61BP60468 96 aaKnown RBP3.15□□□□□ -1.91
NPC1-213ENST00000591955 FLG2Q5D862 2391 aaPredicted RBP3.14□□□□□ -1.91
NPC1-213ENST00000591955 DNAH5Q8TE73 4624 aa3.12□□□□□ -1.91
NPC1-213ENST00000591955 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
NPC1-213ENST00000591955 TPRXLQ17RH7 258 aa3.11□□□□□ -1.91
NPC1-213ENST00000591955 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
NPC1-213ENST00000591955 VPS13BQ7Z7G8 4022 aa3.1□□□□□ -1.91
NPC1-213ENST00000591955 Q5VSD8 79 aa3.08□□□□□ -1.92
NPC1-213ENST00000591955 FAT1Q14517 4588 aa3.07□□□□□ -1.92
NPC1-213ENST00000591955 M0QZ58 72 aa3.07□□□□□ -1.92
NPC1-213ENST00000591955 S4R3F8 94 aa3.07□□□□□ -1.92
NPC1-213ENST00000591955 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
NPC1-213ENST00000591955 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
NPC1-213ENST00000591955 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
NPC1-213ENST00000591955 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
NPC1-213ENST00000591955 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
NPC1-213ENST00000591955 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
NPC1-213ENST00000591955 SRRM2Q9UQ35 2752 aaKnown RBP3.02□□□□□ -1.93
NPC1-213ENST00000591955 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
NPC1-213ENST00000591955 A0A0D9SG42 100 aa3□□□□□ -1.93
NPC1-213ENST00000591955 KRTAP10-1P60331 282 aa3□□□□□ -1.93
NPC1-213ENST00000591955 LRP1Q07954 4544 aaKnown RBP2.99□□□□□ -1.93
NPC1-213ENST00000591955 DNAH8Q96JB1 4490 aa2.99□□□□□ -1.93
NPC1-213ENST00000591955 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
NPC1-213ENST00000591955 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
NPC1-213ENST00000591955 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
NPC1-213ENST00000591955 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
NPC1-213ENST00000591955 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
NPC1-213ENST00000591955 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
NPC1-213ENST00000591955 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
NPC1-213ENST00000591955 LRP2P98164 4655 aa2.94□□□□□ -1.94
NPC1-213ENST00000591955 C9orf92A6NGG3 77 aa2.92□□□□□ -1.94
NPC1-213ENST00000591955 TNXBP22105 4242 aa2.9□□□□□ -1.95
NPC1-213ENST00000591955 KRTAP10-4P60372 401 aaPredicted RBP2.9□□□□□ -1.95
NPC1-213ENST00000591955 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
NPC1-213ENST00000591955 FAT4Q6V0I7 4981 aa2.89□□□□□ -1.95
NPC1-213ENST00000591955 KRTAP10-8P60410 259 aa2.86□□□□□ -1.95
NPC1-213ENST00000591955 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms