RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 DEFB4AO15263 64 aa2.83□□□□□ -1.96
LINC01538-201ENST00000588074 NOTCH1P46531 2555 aa2.83□□□□□ -1.96
LINC01538-201ENST00000588074 DEFB135Q30KP9 77 aa2.82□□□□□ -1.96
LINC01538-201ENST00000588074 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
LINC01538-201ENST00000588074 KRTAP21-3Q3LHN1 58 aa2.82□□□□□ -1.96
LINC01538-201ENST00000588074 APLNQ9ULZ1 77 aa2.82□□□□□ -1.96
LINC01538-201ENST00000588074 CMYA5Q8N3K9 4069 aa2.8□□□□□ -1.96
LINC01538-201ENST00000588074 A0A0D9SG42 100 aa2.79□□□□□ -1.96
LINC01538-201ENST00000588074 MEGF8Q7Z7M0 2845 aa2.79□□□□□ -1.96
LINC01538-201ENST00000588074 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
LINC01538-201ENST00000588074 KRTAP10-6P60371 365 aaPredicted RBP2.78□□□□□ -1.97
LINC01538-201ENST00000588074 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
LINC01538-201ENST00000588074 NBEAL2Q6ZNJ1 2754 aa2.77□□□□□ -1.97
LINC01538-201ENST00000588074 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
LINC01538-201ENST00000588074 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
LINC01538-201ENST00000588074 FBN3Q75N90 2809 aa2.76□□□□□ -1.97
LINC01538-201ENST00000588074 PRKDCP78527 4128 aaKnown RBP2.75□□□□□ -1.97
LINC01538-201ENST00000588074 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
LINC01538-201ENST00000588074 KRTAP1-5Q9BYS1 174 aa2.75□□□□□ -1.97
LINC01538-201ENST00000588074 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
LINC01538-201ENST00000588074 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
LINC01538-201ENST00000588074 TENM3Q9P273 2699 aa2.72□□□□□ -1.97
LINC01538-201ENST00000588074 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
LINC01538-201ENST00000588074 DNAH3Q8TD57 4116 aa2.72□□□□□ -1.97
LINC01538-201ENST00000588074 TGP01266 2768 aa2.71□□□□□ -1.98
LINC01538-201ENST00000588074 HUWE1Q7Z6Z7 4374 aaKnown RBP2.71□□□□□ -1.98
LINC01538-201ENST00000588074 COL7A1Q02388 2944 aa2.71□□□□□ -1.98
LINC01538-201ENST00000588074 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
LINC01538-201ENST00000588074 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
LINC01538-201ENST00000588074 DNAH1Q9P2D7 4330 aa2.7□□□□□ -1.98
LINC01538-201ENST00000588074 DNAH9Q9NYC9 4486 aa2.69□□□□□ -1.98
LINC01538-201ENST00000588074 STAB2Q8WWQ8 2551 aa2.69□□□□□ -1.98
LINC01538-201ENST00000588074 LYSTQ99698 3801 aa2.68□□□□□ -1.98
LINC01538-201ENST00000588074 VPS13DQ5THJ4 4388 aa2.68□□□□□ -1.98
LINC01538-201ENST00000588074 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
LINC01538-201ENST00000588074 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
LINC01538-201ENST00000588074 STARD9Q9P2P6 4700 aa2.65□□□□□ -1.99
LINC01538-201ENST00000588074 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
LINC01538-201ENST00000588074 M0QZ58 72 aa2.64□□□□□ -1.99
LINC01538-201ENST00000588074 DNAH7Q8WXX0 4024 aa2.62□□□□□ -1.99
LINC01538-201ENST00000588074 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
LINC01538-201ENST00000588074 PLECQ15149 4684 aaKnown RBP2.61□□□□□ -1.99
LINC01538-201ENST00000588074 FRAS1Q86XX4 4008 aa2.61□□□□□ -1.99
LINC01538-201ENST00000588074 HYDINQ4G0P3 5121 aa2.61□□□□□ -1.99
LINC01538-201ENST00000588074 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
LINC01538-201ENST00000588074 KMT2AQ03164 3969 aa2.59□□□□□ -1.99
LINC01538-201ENST00000588074 RYR3Q15413 4870 aa2.56□□□□□ -2
LINC01538-201ENST00000588074 DNAH11Q96DT5 4516 aa2.55□□□□□ -2
LINC01538-201ENST00000588074 Q5VSD8 79 aa2.55□□□□□ -2
LINC01538-201ENST00000588074 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
LINC01538-201ENST00000588074 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
LINC01538-201ENST00000588074 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
LINC01538-201ENST00000588074 DNAH10Q8IVF4 4471 aa2.54□□□□□ -2
LINC01538-201ENST00000588074 DMBT1Q9UGM3 2413 aaPredicted RBP2.54□□□□□ -2
LINC01538-201ENST00000588074 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
LINC01538-201ENST00000588074 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
LINC01538-201ENST00000588074 RYR2Q92736 4967 aa2.53□□□□□ -2.01
LINC01538-201ENST00000588074 A0A1B0GVY2 172 aa2.52□□□□□ -2.01
LINC01538-201ENST00000588074 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
LINC01538-201ENST00000588074 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
LINC01538-201ENST00000588074 EPPK1P58107 5090 aaKnown RBP2.49□□□□□ -2.01
LINC01538-201ENST00000588074 DNAH17Q9UFH2 4485 aa2.48□□□□□ -2.01
LINC01538-201ENST00000588074 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
LINC01538-201ENST00000588074 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
LINC01538-201ENST00000588074 DNAH6Q9C0G6 4158 aa2.46□□□□□ -2.02
LINC01538-201ENST00000588074 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
LINC01538-201ENST00000588074 SMR3BP02814 79 aaPredicted RBP2.44□□□□□ -2.02
LINC01538-201ENST00000588074 PKD1P98161 4303 aa2.43□□□□□ -2.02
LINC01538-201ENST00000588074 HECTD4Q9Y4D8 3996 aa2.43□□□□□ -2.02
LINC01538-201ENST00000588074 DNAH5Q8TE73 4624 aa2.42□□□□□ -2.02
LINC01538-201ENST00000588074 KIAA1109Q2LD37 5005 aa2.42□□□□□ -2.02
LINC01538-201ENST00000588074 LRP1BQ9NZR2 4599 aa2.41□□□□□ -2.02
LINC01538-201ENST00000588074 C9orf92A6NGG3 77 aa2.41□□□□□ -2.02
LINC01538-201ENST00000588074 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
LINC01538-201ENST00000588074 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
LINC01538-201ENST00000588074 FAT1Q14517 4588 aa2.37□□□□□ -2.03
LINC01538-201ENST00000588074 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
LINC01538-201ENST00000588074 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
LINC01538-201ENST00000588074 TNP1P09430 55 aa2.36□□□□□ -2.03
LINC01538-201ENST00000588074 HSPG2P98160 4391 aa2.35□□□□□ -2.03
LINC01538-201ENST00000588074 BIRC6Q9NR09 4857 aa2.35□□□□□ -2.03
LINC01538-201ENST00000588074 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
LINC01538-201ENST00000588074 RYR1P21817 5038 aa2.34□□□□□ -2.03
LINC01538-201ENST00000588074 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
LINC01538-201ENST00000588074 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
LINC01538-201ENST00000588074 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
LINC01538-201ENST00000588074 PCLOQ9Y6V0 5065 aa2.32□□□□□ -2.04
LINC01538-201ENST00000588074 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
LINC01538-201ENST00000588074 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
LINC01538-201ENST00000588074 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
LINC01538-201ENST00000588074 KRTAP10-4P60372 401 aaPredicted RBP2.3□□□□□ -2.04
LINC01538-201ENST00000588074 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
LINC01538-201ENST00000588074 HERC2O95714 4834 aa2.29□□□□□ -2.04
LINC01538-201ENST00000588074 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
LINC01538-201ENST00000588074 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
LINC01538-201ENST00000588074 KRTAP10-7P60409 375 aaPredicted RBP2.25□□□□□ -2.05
LINC01538-201ENST00000588074 PKHD1L1Q86WI1 4243 aa2.23□□□□□ -2.05
LINC01538-201ENST00000588074 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
LINC01538-201ENST00000588074 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
LINC01538-201ENST00000588074 HERC1Q15751 4861 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms