RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	MT1B	P07438	61 aa		0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	TOMM5	Q8N4H5	51 aa		0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	FAM213B	Q8TBF2	198 aa		0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	IFI27L1	Q96BM0	104 aa		0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	ZNF625	Q96I27	306 aa	Predicted RBP	0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	OBSCN-AS1	Q96MR7	158 aa		0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	PMCHL2	Q9BQD1	86 aa		0.98	□□□□□ -2.25
VAPA-208	ENST00000584796	TRAV23DV6	A0A075B6W5	121 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	IGKV3D-7	A0A0C4DH55	119 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796		H7BZZ5	65 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	SPINK1	P00995	79 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	POLR2K	P53803	58 aa	Known RBP	0.97	□□□□□ -2.25
VAPA-208	ENST00000584796		Q5BKY6	102 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796		Q5VV11	94 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	SPAG11A	Q6PDA7	123 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	SERP2	Q8N6R1	65 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	SPTSSB	Q8NFR3	76 aa		0.97	□□□□□ -2.25
VAPA-208	ENST00000584796	DST	Q03001	7570 aa	Known RBP	0.96	□□□□□ -2.26
VAPA-208	ENST00000584796		A0A087WXM4	84 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	TRBV30	A0A0K0K1B3	111 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	TEX49	A0A1B0GTD5	131 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	C7orf77	A4D0Y5	90 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	NAP1L6	A6NFF2	107 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796		I3L3M4	83 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	SPRR2D	P22532	72 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	FAU	P35544	74 aa	Known RBP	0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	KRTDAP	P60985	99 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	SEC11A	P67812	179 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	PEA15	Q15121	130 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	BAGE2	Q86Y30	109 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	PPP1R1C	Q8WVI7	109 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	SPRR2F	Q96RM1	72 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	TOMM7	Q9P0U1	55 aa		0.96	□□□□□ -2.26
VAPA-208	ENST00000584796	TRAV22	A0A0B4J277	110 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	SYS1-DBNDD2	H3BUS1	97 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	NDUFC1	O43677	76 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	KRTAP5-10	Q6L8G5	202 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	ALKAL2	Q6UX46	152 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	CNFN	Q9BYD5	112 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	TMEM167B	Q9NRX6	74 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	UQCR10	Q9UDW1	63 aa		0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.95	□□□□□ -2.26
VAPA-208	ENST00000584796	CTXND1	A0A1B0GTU2	59 aa		0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	LOC101927531	A0A1B0GV80	90 aa		0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	RPS29	P62273	56 aa	Known RBP	0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	KLKP1	Q107X0	134 aa		0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	ST20	Q9HBF5	79 aa		0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	LINC00846	Q9NV44	126 aa		0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	HIGD1B	Q9P298	99 aa		0.94	□□□□□ -2.26
VAPA-208	ENST00000584796	APOC3	P02656	99 aa		0.93	□□□□□ -2.26
VAPA-208	ENST00000584796	ETDB	Q3ZM63	59 aa		0.93	□□□□□ -2.26
VAPA-208	ENST00000584796	C20orf197	Q8N268	126 aa		0.93	□□□□□ -2.26
VAPA-208	ENST00000584796	CDKN2A-AS1	Q9UH64	79 aa		0.93	□□□□□ -2.26
VAPA-208	ENST00000584796		A0A1W2PPM0	123 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796		F2Z2F3	143 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796		F8VRH5	84 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	NCR3	O14931	201 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	IGLC3	P0DOY3	106 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	FCER1G	P30273	86 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	SPRR1A	P35321	89 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	KRTAP12-1	P59990	96 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	ELOF1	P60002	83 aa	Known RBP	0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	BVES-AS1	Q5T3Y7	98 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796		Q6ZQY7	126 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	SSBP3-AS1	Q7Z2R9	100 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796		Q8IZM0	81 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	COX7B2	Q8TF08	81 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	PRO1854	Q9UHT4	67 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	SPCS1	Q9Y6A9	102 aa		0.92	□□□□□ -2.26
VAPA-208	ENST00000584796	SERF2	P84101	59 aa		0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	AMELX	Q99217	191 aa		0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	SMIM2	Q9BVW6	85 aa		0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	NXT2	Q9NPJ8	142 aa	Known RBP	0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	MANBAL	Q9NQG1	85 aa		0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	SMCO4	Q9NRQ5	59 aa		0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	MUC5AC	P98088	5654 aa		0.91	□□□□□ -2.26
VAPA-208	ENST00000584796	IGIP	A6NJ69	53 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796	CHKB-CPT1B	H3BT56	60 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796	COX6C	P09669	75 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796	ADIRF	Q15847	76 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796	KRTAP19-8	Q3LI54	63 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796	LINC00208	Q96KT6	92 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796	GNG13	Q9P2W3	67 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796		V9GYV3	84 aa		0.9	□□□□□ -2.27
VAPA-208	ENST00000584796		D6R8Y8	96 aa		0.89	□□□□□ -2.27
VAPA-208	ENST00000584796	LINC00575	Q6W349	94 aa		0.89	□□□□□ -2.27
VAPA-208	ENST00000584796	KCNQ1DN	Q9H478	68 aa		0.89	□□□□□ -2.27
VAPA-208	ENST00000584796	FXYD6-FXYD2	A0A087WZ82	144 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796		A0A1B0GUT8	65 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796	ETDC	A0A1B0GVM5	59 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796	PPP1R17	O96001	155 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796	MT4	P47944	62 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796	LINC00643	Q86TS7	51 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796	C18orf32	Q8TCD1	76 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796		Q96NJ1	140 aa		0.88	□□□□□ -2.27
VAPA-208	ENST00000584796		H3BUT2	72 aa		0.87	□□□□□ -2.27
VAPA-208	ENST00000584796	ACYP1	P07311	99 aa		0.87	□□□□□ -2.27
VAPA-208	ENST00000584796	SMIM13	P0DJ93	91 aa		0.87	□□□□□ -2.27
VAPA-208	ENST00000584796	SPRR1B	P22528	89 aa		0.87	□□□□□ -2.27
VAPA-208	ENST00000584796	IFI27	P40305	119 aa	Predicted RBP	0.87	□□□□□ -2.27

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