RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 AKAP9Q99996 3911 aa5.84□□□□□ -1.47
CSNK1D-217ENST00000581241 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
CSNK1D-217ENST00000581241 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
CSNK1D-217ENST00000581241 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
CSNK1D-217ENST00000581241 DNAH9Q9NYC9 4486 aa5.72□□□□□ -1.49
CSNK1D-217ENST00000581241 DNAH10Q8IVF4 4471 aa5.69□□□□□ -1.5
CSNK1D-217ENST00000581241 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
CSNK1D-217ENST00000581241 DNAH3Q8TD57 4116 aa5.67□□□□□ -1.5
CSNK1D-217ENST00000581241 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
CSNK1D-217ENST00000581241 MT1HP80294 61 aa5.65□□□□□ -1.51
CSNK1D-217ENST00000581241 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.51
CSNK1D-217ENST00000581241 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
CSNK1D-217ENST00000581241 VPS13CQ709C8 3753 aa5.62□□□□□ -1.51
CSNK1D-217ENST00000581241 DNAH17Q9UFH2 4485 aa5.61□□□□□ -1.51
CSNK1D-217ENST00000581241 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
CSNK1D-217ENST00000581241 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
CSNK1D-217ENST00000581241 MT2AP02795 61 aa5.57□□□□□ -1.52
CSNK1D-217ENST00000581241 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
CSNK1D-217ENST00000581241 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
CSNK1D-217ENST00000581241 VPS13DQ5THJ4 4388 aa5.49□□□□□ -1.53
CSNK1D-217ENST00000581241 COL7A1Q02388 2944 aa5.49□□□□□ -1.53
CSNK1D-217ENST00000581241 CMYA5Q8N3K9 4069 aa5.48□□□□□ -1.53
CSNK1D-217ENST00000581241 MT1FP04733 61 aa5.45□□□□□ -1.54
CSNK1D-217ENST00000581241 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
CSNK1D-217ENST00000581241 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
CSNK1D-217ENST00000581241 PLECQ15149 4684 aaKnown RBP5.42□□□□□ -1.54
CSNK1D-217ENST00000581241 DYNC2H1Q8NCM8 4307 aaKnown RBP5.4□□□□□ -1.54
CSNK1D-217ENST00000581241 ZNF469Q96JG9 3925 aaPredicted RBP5.39□□□□□ -1.55
CSNK1D-217ENST00000581241 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
CSNK1D-217ENST00000581241 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
CSNK1D-217ENST00000581241 DNAH6Q9C0G6 4158 aa5.36□□□□□ -1.55
CSNK1D-217ENST00000581241 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
CSNK1D-217ENST00000581241 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
CSNK1D-217ENST00000581241 DYNC1H1Q14204 4646 aaKnown RBP5.31□□□□□ -1.56
CSNK1D-217ENST00000581241 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
CSNK1D-217ENST00000581241 ANK2Q01484 3957 aa5.27□□□□□ -1.57
CSNK1D-217ENST00000581241 LRP1BQ9NZR2 4599 aa5.22□□□□□ -1.57
CSNK1D-217ENST00000581241 PRKDCP78527 4128 aaKnown RBP5.22□□□□□ -1.57
CSNK1D-217ENST00000581241 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
CSNK1D-217ENST00000581241 STARD9Q9P2P6 4700 aa5.15□□□□□ -1.58
CSNK1D-217ENST00000581241 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
CSNK1D-217ENST00000581241 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
CSNK1D-217ENST00000581241 VPS13BQ7Z7G8 4022 aa5.1□□□□□ -1.59
CSNK1D-217ENST00000581241 MT1XP80297 61 aa5.1□□□□□ -1.59
CSNK1D-217ENST00000581241 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
CSNK1D-217ENST00000581241 FAT1Q14517 4588 aa5.1□□□□□ -1.59
CSNK1D-217ENST00000581241 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.6
CSNK1D-217ENST00000581241 KRTAP12-4P60329 112 aa5.09□□□□□ -1.6
CSNK1D-217ENST00000581241 MT1GP13640 62 aa5.04□□□□□ -1.6
CSNK1D-217ENST00000581241 SPRR2EP22531 72 aa5.04□□□□□ -1.6
CSNK1D-217ENST00000581241 SPRR2BP35325 72 aa5.04□□□□□ -1.6
CSNK1D-217ENST00000581241 SPRR2AP35326 72 aa5.04□□□□□ -1.6
CSNK1D-217ENST00000581241 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
CSNK1D-217ENST00000581241 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
CSNK1D-217ENST00000581241 MT1BP07438 61 aa4.96□□□□□ -1.61
CSNK1D-217ENST00000581241 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.62
CSNK1D-217ENST00000581241 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
CSNK1D-217ENST00000581241 HSPG2P98160 4391 aa4.94□□□□□ -1.62
CSNK1D-217ENST00000581241 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
CSNK1D-217ENST00000581241 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.63
CSNK1D-217ENST00000581241 HERC1Q15751 4861 aa4.89□□□□□ -1.63
CSNK1D-217ENST00000581241 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
CSNK1D-217ENST00000581241 SPRR2DP22532 72 aa4.88□□□□□ -1.63
CSNK1D-217ENST00000581241 LCE2BO14633 110 aa4.86□□□□□ -1.63
CSNK1D-217ENST00000581241 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
CSNK1D-217ENST00000581241 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
CSNK1D-217ENST00000581241 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
CSNK1D-217ENST00000581241 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
CSNK1D-217ENST00000581241 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
CSNK1D-217ENST00000581241 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
CSNK1D-217ENST00000581241 RYR1P21817 5038 aa4.75□□□□□ -1.65
CSNK1D-217ENST00000581241 PKD1P98161 4303 aa4.75□□□□□ -1.65
CSNK1D-217ENST00000581241 LYSTQ99698 3801 aa4.74□□□□□ -1.65
CSNK1D-217ENST00000581241 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
CSNK1D-217ENST00000581241 RYR3Q15413 4870 aa4.7□□□□□ -1.66
CSNK1D-217ENST00000581241 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
CSNK1D-217ENST00000581241 PKHD1L1Q86WI1 4243 aa4.67□□□□□ -1.66
CSNK1D-217ENST00000581241 MT1LQ93083 61 aa4.66□□□□□ -1.66
CSNK1D-217ENST00000581241 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
CSNK1D-217ENST00000581241 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
CSNK1D-217ENST00000581241 MT1EP04732 61 aa4.6□□□□□ -1.67
CSNK1D-217ENST00000581241 RYR2Q92736 4967 aa4.58□□□□□ -1.68
CSNK1D-217ENST00000581241 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
CSNK1D-217ENST00000581241 PRM1P04553 51 aa4.55□□□□□ -1.68
CSNK1D-217ENST00000581241 TNXBP22105 4242 aa4.51□□□□□ -1.69
CSNK1D-217ENST00000581241 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
CSNK1D-217ENST00000581241 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
CSNK1D-217ENST00000581241 MT1MQ8N339 61 aa4.46□□□□□ -1.7
CSNK1D-217ENST00000581241 MT3P25713 68 aa4.45□□□□□ -1.7
CSNK1D-217ENST00000581241 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
CSNK1D-217ENST00000581241 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
CSNK1D-217ENST00000581241 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
CSNK1D-217ENST00000581241 HYDINQ4G0P3 5121 aa4.41□□□□□ -1.7
CSNK1D-217ENST00000581241 LPAP08519 4548 aa4.41□□□□□ -1.7
CSNK1D-217ENST00000581241 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.72
CSNK1D-217ENST00000581241 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
CSNK1D-217ENST00000581241 HERC2O95714 4834 aa4.29□□□□□ -1.72
CSNK1D-217ENST00000581241 LRP2P98164 4655 aa4.29□□□□□ -1.72
CSNK1D-217ENST00000581241 MT4P47944 62 aa4.28□□□□□ -1.73
CSNK1D-217ENST00000581241 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms