RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 DEFB108AA8MXU0 73 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 UMAD1C9J7I0 102 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 DEFB108BQ8NET1 73 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 DEFB104AQ8WTQ1 72 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 NMES1Q9C002 83 aa1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
HERPUD1-211ENST00000566550 LRP1Q07954 4544 aaKnown RBP1.13□□□□□ -2.23
HERPUD1-211ENST00000566550 IAPPP10997 89 aa1.13□□□□□ -2.23
HERPUD1-211ENST00000566550 WFDC9Q8NEX5 89 aa1.13□□□□□ -2.23
HERPUD1-211ENST00000566550 DNAH17Q9UFH2 4485 aa1.13□□□□□ -2.23
HERPUD1-211ENST00000566550 H3BVH4 76 aa1.12□□□□□ -2.23
HERPUD1-211ENST00000566550 GAFA1Q96PS6 74 aa1.12□□□□□ -2.23
HERPUD1-211ENST00000566550 GNG13Q9P2W3 67 aa1.12□□□□□ -2.23
HERPUD1-211ENST00000566550 TRAV21A0A0B4J279 112 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 A0A0D9SG42 100 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 LINC00959A0A1B0GUT2 108 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 SFTA3P0C7M3 94 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 SERF2P84101 59 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 RPL39P5Q59GN2 51 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 HEPN1Q6WQI6 88 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 LEAP2Q969E1 77 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 TMEM167BQ9NRX6 74 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 HILPDAQ9Y5L2 63 aa1.11□□□□□ -2.23
HERPUD1-211ENST00000566550 TRBV7-4A0A0J9YYF1 115 aa1.1□□□□□ -2.23
HERPUD1-211ENST00000566550 M0R1W7 72 aa1.1□□□□□ -2.23
HERPUD1-211ENST00000566550 IFI27P40305 119 aaPredicted RBP1.1□□□□□ -2.23
HERPUD1-211ENST00000566550 PRCDQ00LT1 54 aa1.1□□□□□ -2.23
HERPUD1-211ENST00000566550 MINOS1Q5TGZ0 78 aa1.1□□□□□ -2.23
HERPUD1-211ENST00000566550 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 LYNX1G3V0Z9 82 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 APELAP0DMC3 54 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 COX6A2Q02221 97 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 ATP5EP2Q5VTU8 51 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 TMEM167AQ8TBQ9 72 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 C10orf95Q9H7T3 257 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 KAAG1Q9UBP8 84 aa1.09□□□□□ -2.23
HERPUD1-211ENST00000566550 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.24
HERPUD1-211ENST00000566550 TNXBP22105 4242 aa1.08□□□□□ -2.24
HERPUD1-211ENST00000566550 H3BUX3 64 aa1.08□□□□□ -2.24
HERPUD1-211ENST00000566550 NDUFB1O75438 58 aa1.08□□□□□ -2.24
HERPUD1-211ENST00000566550 FAM103A1Q9BTL3 118 aaKnown RBP1.08□□□□□ -2.24
HERPUD1-211ENST00000566550 TIMM8BQ9Y5J9 83 aaPredicted RBP1.08□□□□□ -2.24
HERPUD1-211ENST00000566550 A0A087WWC5 75 aa1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 H3BUA1 57 aa1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 PRB3Q04118 309 aaPredicted RBP1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 USMG5Q96IX5 58 aa1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 CRIPTQ9P021 101 aa1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 PRO0255Q9UI72 69 aa1.07□□□□□ -2.24
HERPUD1-211ENST00000566550 NDUFA4O00483 81 aa1.06□□□□□ -2.24
HERPUD1-211ENST00000566550 SPINK4O60575 86 aa1.06□□□□□ -2.24
HERPUD1-211ENST00000566550 NDUFA3O95167 84 aa1.06□□□□□ -2.24
HERPUD1-211ENST00000566550 WT1-ASQ06250 92 aa1.06□□□□□ -2.24
HERPUD1-211ENST00000566550 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
HERPUD1-211ENST00000566550 I3L2K1 104 aa1.05□□□□□ -2.24
HERPUD1-211ENST00000566550 HTN1P15515 57 aa1.05□□□□□ -2.24
HERPUD1-211ENST00000566550 COX7BP24311 80 aa1.05□□□□□ -2.24
HERPUD1-211ENST00000566550 FCER1GP30273 86 aa1.05□□□□□ -2.24
HERPUD1-211ENST00000566550 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
HERPUD1-211ENST00000566550 LINC01549A6NIU2 74 aa1.04□□□□□ -2.24
HERPUD1-211ENST00000566550 K7EIM0 57 aa1.04□□□□□ -2.24
HERPUD1-211ENST00000566550 SMR3BP02814 79 aaPredicted RBP1.04□□□□□ -2.24
HERPUD1-211ENST00000566550 NREPQ16612 68 aa1.04□□□□□ -2.24
HERPUD1-211ENST00000566550 RHPN1-AS1Q9BWJ2 59 aa1.04□□□□□ -2.24
HERPUD1-211ENST00000566550 CNFNQ9BYD5 112 aa1.04□□□□□ -2.24
HERPUD1-211ENST00000566550 SMIM27A0A1W2PRY6 76 aa1.03□□□□□ -2.24
HERPUD1-211ENST00000566550 PLNP26678 52 aa1.03□□□□□ -2.24
HERPUD1-211ENST00000566550 DEFB136Q30KP8 78 aa1.03□□□□□ -2.24
HERPUD1-211ENST00000566550 TNCP24821 2201 aa1.03□□□□□ -2.25
HERPUD1-211ENST00000566550 I3L3M4 83 aa1.02□□□□□ -2.25
HERPUD1-211ENST00000566550 K7EMI3 77 aa1.02□□□□□ -2.25
HERPUD1-211ENST00000566550 COX8AP10176 69 aa1.02□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB131AP59861 70 aa1.02□□□□□ -2.25
HERPUD1-211ENST00000566550 Q8IZM0 81 aa1.02□□□□□ -2.25
HERPUD1-211ENST00000566550 LPAP08519 4548 aa1.01□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB130BP0DP73 79 aa1.01□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB130AP0DP74 79 aa1.01□□□□□ -2.25
HERPUD1-211ENST00000566550 HTN3P15516 51 aa1.01□□□□□ -2.25
HERPUD1-211ENST00000566550 SMIM2Q9BVW6 85 aa1.01□□□□□ -2.25
HERPUD1-211ENST00000566550 KRTAP4-1Q9BYQ7 146 aa1.01□□□□□ -2.25
HERPUD1-211ENST00000566550 C3orf79P0CE67 100 aa1□□□□□ -2.25
HERPUD1-211ENST00000566550 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
HERPUD1-211ENST00000566550 ATXN8Q156A1 80 aa1□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB114Q30KQ6 69 aa1□□□□□ -2.25
HERPUD1-211ENST00000566550 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
HERPUD1-211ENST00000566550 K7EQZ3 153 aa0.99□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB1P60022 68 aa0.99□□□□□ -2.25
HERPUD1-211ENST00000566550 KLK9Q2XQG4 91 aa0.99□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB135Q30KP9 77 aa0.99□□□□□ -2.25
HERPUD1-211ENST00000566550 RPL39LQ96EH5 51 aaKnown RBP0.99□□□□□ -2.25
HERPUD1-211ENST00000566550 TOMM7Q9P0U1 55 aa0.99□□□□□ -2.25
HERPUD1-211ENST00000566550 CRIP1P50238 77 aa0.98□□□□□ -2.25
HERPUD1-211ENST00000566550 CLPSL2Q6UWE3 100 aa0.98□□□□□ -2.25
HERPUD1-211ENST00000566550 A0A096LPF7 62 aa0.97□□□□□ -2.25
HERPUD1-211ENST00000566550 M0QY20 66 aa0.97□□□□□ -2.25
HERPUD1-211ENST00000566550 DEFB4AO15263 64 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms