RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 F5P12259 2224 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 LRP1Q07954 4544 aaKnown RBP0.79□□□□□ -2.28
USP8-216ENST00000561206 CR1P17927 2039 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 IGKV3OR2-268A0A0C4DH90 116 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 H0Y9P7 68 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 IGLV1-51P01701 117 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 HTN1P15515 57 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 DEFB1P60022 68 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 COX17Q14061 63 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 SPINK13Q1W4C9 94 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 KLK9Q2XQG4 91 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 DEFB112Q30KQ8 113 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 SPAG11AQ6PDA7 123 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 Q6ZQY7 126 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 RHPN1-AS1Q9BWJ2 59 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 KCNQ1DNQ9H478 68 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 ALMS1Q8TCU4 4167 aa0.79□□□□□ -2.28
USP8-216ENST00000561206 KNL1Q8NG31 2342 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 A0A096LNT2 108 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 TRGV1A0A0A0MS02 117 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 A0A0G2JQZ4 141 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 B4DSR2 109 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 G3V318 75 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 H3BUA1 57 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 SPINK7P58062 85 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 C1orf134Q5TEV5 83 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 WFDC13Q8IUB5 93 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 Q8IZM0 81 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 USMG5Q96IX5 58 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 PLAC8Q9NZF1 115 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 PSORS1C2Q9UIG4 136 aa0.78□□□□□ -2.28
USP8-216ENST00000561206 LINC00959A0A1B0GUT2 108 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 A8MTW9 85 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 K7EQZ3 153 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 CNBPP62633 177 aaKnown RBP0.77□□□□□ -2.29
USP8-216ENST00000561206 C1orf137Q5JT78 98 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 CSAG1Q6PB30 78 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 WFDC10BQ8IUB3 73 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 C9orf163Q8N9P6 203 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 U3KQA8 63 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 DNAH10Q8IVF4 4471 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 WNK2Q9Y3S1 2297 aa0.77□□□□□ -2.29
USP8-216ENST00000561206 IGLV5-48A0A075B6I7 105 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 DEFB131BA0A096LNP1 70 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 A0A1B0GU69 56 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 LYNX1G3V0Z9 82 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 UQCR11O14957 56 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 LYNX1P0DP58 116 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 DEFB131AP59861 70 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 ROMO1P60602 79 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 MIR22HGQ0VDD5 57 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 C5orf56Q8N8D9 126 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 DEFB105AQ8NG35 78 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 SPRR4Q96PI1 79 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 STARD9Q9P2P6 4700 aa0.76□□□□□ -2.29
USP8-216ENST00000561206 GVQW2A0A096LPI5 108 aaPredicted RBP0.75□□□□□ -2.29
USP8-216ENST00000561206 ACYP2P14621 99 aa0.75□□□□□ -2.29
USP8-216ENST00000561206 CLPSL2Q6UWE3 100 aa0.75□□□□□ -2.29
USP8-216ENST00000561206 UNQ6190/PRO20217Q6UXQ8 127 aa0.75□□□□□ -2.29
USP8-216ENST00000561206 Q6ZSA8 131 aa0.75□□□□□ -2.29
USP8-216ENST00000561206 TP53AIP1Q9HCN2 124 aa0.75□□□□□ -2.29
USP8-216ENST00000561206 NOP10Q9NPE3 64 aaKnown RBP0.75□□□□□ -2.29
USP8-216ENST00000561206 PRO2289Q9P1D8 64 aa0.75□□□□□ -2.29
USP8-216ENST00000561206 APOBP04114 4563 aaKnown RBP0.75□□□□□ -2.29
USP8-216ENST00000561206 A0A087WSZ3 146 aa0.74□□□□□ -2.29
USP8-216ENST00000561206 ANGP03950 147 aaKnown RBP0.74□□□□□ -2.29
USP8-216ENST00000561206 RPL37AP61513 92 aaKnown RBP0.74□□□□□ -2.29
USP8-216ENST00000561206 DEFB113Q30KQ7 82 aa0.74□□□□□ -2.29
USP8-216ENST00000561206 DMAC1Q96GE9 116 aa0.74□□□□□ -2.29
USP8-216ENST00000561206 C6orf48Q9UBA6 75 aa0.74□□□□□ -2.29
USP8-216ENST00000561206 AKAP6Q13023 2319 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 MMP24-AS1A0A0U1RRL7 71 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 NUPR2A6NF83 97 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 H3BUX3 64 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 DEFB130BP0DP73 79 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 DEFB130AP0DP74 79 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 DEFB136Q30KP8 78 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 DEFB109BQ30KR1 87 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 Q6ZRX8 168 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 DNAH11Q96DT5 4516 aa0.73□□□□□ -2.29
USP8-216ENST00000561206 DNAH5Q8TE73 4624 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 A0A096LPF7 62 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 TPRXLQ17RH7 258 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 C4orf3Q8WVX3 66 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 CCL19Q99731 98 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 MRPL34Q9BQ48 92 aaKnown RBP0.72□□□□□ -2.29
USP8-216ENST00000561206 LINC00472Q9H8W2 130 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 PRO0255Q9UI72 69 aa0.72□□□□□ -2.29
USP8-216ENST00000561206 LY6G6CO95867 125 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 SPRR1AP35321 89 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 KRTAP26-1Q6PEX3 210 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 C10orf99Q6UWK7 81 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 SSBP3-AS1Q7Z2R9 100 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 PKHD1L1Q86WI1 4243 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 VPS13DQ5THJ4 4388 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 ROS1P08922 2347 aa0.71□□□□□ -2.3
USP8-216ENST00000561206 SPACA4Q8TDM5 124 aa0.7□□□□□ -2.3
USP8-216ENST00000561206 A0A087WTM6 91 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms