RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 FAM208AQ9UK61 1670 aaKnown RBP0.49□□□□□ -2.33
SPG11-218ENST00000559754 ANK2Q01484 3957 aa0.48□□□□□ -2.33
SPG11-218ENST00000559754 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
SPG11-218ENST00000559754 NFAT5O94916 1531 aa0.48□□□□□ -2.33
SPG11-218ENST00000559754 ETDCA0A1B0GVM5 59 aa0.47□□□□□ -2.33
SPG11-218ENST00000559754 H0YAA0 97 aa0.47□□□□□ -2.33
SPG11-218ENST00000559754 SRRM2Q9UQ35 2752 aaKnown RBP0.47□□□□□ -2.33
SPG11-218ENST00000559754 LINC01549A6NIU2 74 aa0.46□□□□□ -2.34
SPG11-218ENST00000559754 LYNX1G3V0Z9 82 aa0.46□□□□□ -2.34
SPG11-218ENST00000559754 GCC2Q8IWJ2 1684 aa0.46□□□□□ -2.34
SPG11-218ENST00000559754 AKAP9Q99996 3911 aa0.45□□□□□ -2.34
SPG11-218ENST00000559754 TOGARAM1Q9Y4F4 1720 aa0.45□□□□□ -2.34
SPG11-218ENST00000559754 SFTA3P0C7M3 94 aa0.45□□□□□ -2.34
SPG11-218ENST00000559754 TRRAPQ9Y4A5 3859 aa0.45□□□□□ -2.34
SPG11-218ENST00000559754 DEFB124Q8NES8 71 aa0.44□□□□□ -2.34
SPG11-218ENST00000559754 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
SPG11-218ENST00000559754 DNAH1Q9P2D7 4330 aa0.43□□□□□ -2.34
SPG11-218ENST00000559754 PRKDCP78527 4128 aaKnown RBP0.43□□□□□ -2.34
SPG11-218ENST00000559754 CRIP1P50238 77 aa0.43□□□□□ -2.34
SPG11-218ENST00000559754 SMIM5Q71RC9 77 aa0.43□□□□□ -2.34
SPG11-218ENST00000559754 DDX60Q8IY21 1712 aaKnown RBP0.43□□□□□ -2.34
SPG11-218ENST00000559754 FAT3Q8TDW7 4589 aa0.42□□□□□ -2.34
SPG11-218ENST00000559754 M0R2T5 61 aa0.42□□□□□ -2.34
SPG11-218ENST00000559754 A0A1B0GUL6 1792 aa0.42□□□□□ -2.34
SPG11-218ENST00000559754 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
SPG11-218ENST00000559754 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
SPG11-218ENST00000559754 PRM1P04553 51 aa0.41□□□□□ -2.34
SPG11-218ENST00000559754 ANKRD36CQ5JPF3 1778 aa0.41□□□□□ -2.34
SPG11-218ENST00000559754 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
SPG11-218ENST00000559754 LYSTQ99698 3801 aa0.4□□□□□ -2.35
SPG11-218ENST00000559754 HUWE1Q7Z6Z7 4374 aaKnown RBP0.4□□□□□ -2.35
SPG11-218ENST00000559754 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
SPG11-218ENST00000559754 DNAH10Q8IVF4 4471 aa0.39□□□□□ -2.35
SPG11-218ENST00000559754 DNAH9Q9NYC9 4486 aa0.39□□□□□ -2.35
SPG11-218ENST00000559754 K7EMI3 77 aa0.39□□□□□ -2.35
SPG11-218ENST00000559754 TNXBP22105 4242 aa0.39□□□□□ -2.35
SPG11-218ENST00000559754 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 DNAH11Q96DT5 4516 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
SPG11-218ENST00000559754 HSPG2P98160 4391 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 IAPPP10997 89 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 CD52P31358 61 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 TFF3Q07654 80 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 DEFB135Q30KP9 77 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 DEFB104AQ8WTQ1 72 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 LRP2P98164 4655 aa0.38□□□□□ -2.35
SPG11-218ENST00000559754 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
SPG11-218ENST00000559754 DYNC1H1Q14204 4646 aaKnown RBP0.37□□□□□ -2.35
SPG11-218ENST00000559754 DNAH5Q8TE73 4624 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 DEFB130BP0DP73 79 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 DEFB130AP0DP74 79 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 SPRR2DP22532 72 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 HECTD4Q9Y4D8 3996 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 HRNRQ86YZ3 2850 aaPredicted RBP0.37□□□□□ -2.35
SPG11-218ENST00000559754 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
SPG11-218ENST00000559754 PLECQ15149 4684 aaKnown RBP0.36□□□□□ -2.35
SPG11-218ENST00000559754 FAT1Q14517 4588 aa0.36□□□□□ -2.35
SPG11-218ENST00000559754 VPS13DQ5THJ4 4388 aa0.36□□□□□ -2.35
SPG11-218ENST00000559754 LRP1Q07954 4544 aaKnown RBP0.36□□□□□ -2.35
SPG11-218ENST00000559754 SERF2P84101 59 aa0.36□□□□□ -2.35
SPG11-218ENST00000559754 COX14Q96I36 57 aa0.36□□□□□ -2.35
SPG11-218ENST00000559754 LRP1BQ9NZR2 4599 aa0.36□□□□□ -2.35
SPG11-218ENST00000559754 APOBP04114 4563 aaKnown RBP0.35□□□□□ -2.35
SPG11-218ENST00000559754 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
SPG11-218ENST00000559754 DNAH7Q8WXX0 4024 aa0.35□□□□□ -2.35
SPG11-218ENST00000559754 STATHP02808 62 aa0.35□□□□□ -2.35
SPG11-218ENST00000559754 NCBP2-AS2Q69YL0 99 aa0.35□□□□□ -2.35
SPG11-218ENST00000559754 DNAH6Q9C0G6 4158 aa0.35□□□□□ -2.35
SPG11-218ENST00000559754 DNAH2Q9P225 4427 aa0.35□□□□□ -2.35
SPG11-218ENST00000559754 DNAH17Q9UFH2 4485 aa0.34□□□□□ -2.35
SPG11-218ENST00000559754 DEFB133Q30KQ1 61 aa0.34□□□□□ -2.36
SPG11-218ENST00000559754 STARD9Q9P2P6 4700 aa0.34□□□□□ -2.36
SPG11-218ENST00000559754 ALMS1Q8TCU4 4167 aa0.34□□□□□ -2.36
SPG11-218ENST00000559754 DNAH8Q96JB1 4490 aa0.34□□□□□ -2.36
SPG11-218ENST00000559754 VPS13BQ7Z7G8 4022 aa0.33□□□□□ -2.36
SPG11-218ENST00000559754 DEFB108AA8MXU0 73 aa0.33□□□□□ -2.36
SPG11-218ENST00000559754 NMES1Q9C002 83 aa0.33□□□□□ -2.36
SPG11-218ENST00000559754 H0YGG7 62 aa0.32□□□□□ -2.36
SPG11-218ENST00000559754 M0R1W7 72 aa0.32□□□□□ -2.36
SPG11-218ENST00000559754 MINOS1Q5TGZ0 78 aa0.32□□□□□ -2.36
SPG11-218ENST00000559754 PKHD1L1Q86WI1 4243 aa0.32□□□□□ -2.36
SPG11-218ENST00000559754 PKD1P98161 4303 aa0.32□□□□□ -2.36
SPG11-218ENST00000559754 FCER1GP30273 86 aa0.31□□□□□ -2.36
SPG11-218ENST00000559754 H3BNG1 76 aa0.3□□□□□ -2.36
SPG11-218ENST00000559754 IGIPA6NJ69 53 aa0.29□□□□□ -2.36
SPG11-218ENST00000559754 SPRR2BP35325 72 aa0.29□□□□□ -2.36
SPG11-218ENST00000559754 DEFB108BQ8NET1 73 aa0.29□□□□□ -2.36
SPG11-218ENST00000559754 KAAG1Q9UBP8 84 aa0.29□□□□□ -2.36
SPG11-218ENST00000559754 MUC17Q685J3 4493 aa0.28□□□□□ -2.36
SPG11-218ENST00000559754 H3BUA1 57 aa0.28□□□□□ -2.36
SPG11-218ENST00000559754 C6orf48Q9UBA6 75 aa0.28□□□□□ -2.36
SPG11-218ENST00000559754 LPAP08519 4548 aa0.28□□□□□ -2.37
SPG11-218ENST00000559754 SPART-AS1P0CW21 52 aa0.27□□□□□ -2.37
SPG11-218ENST00000559754 RPS27P42677 84 aaKnown RBP0.27□□□□□ -2.37
SPG11-218ENST00000559754 PRLHP81277 87 aa0.27□□□□□ -2.37
SPG11-218ENST00000559754 KRTAP19-6Q3LI70 58 aa0.27□□□□□ -2.37
SPG11-218ENST00000559754 RPS27LQ71UM5 84 aaKnown RBP0.27□□□□□ -2.37
SPG11-218ENST00000559754 H3BUX3 64 aa0.26□□□□□ -2.37
SPG11-218ENST00000559754 MT1HL1P0DM35 61 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms