RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 WT1-ASQ06250 92 aa1.03□□□□□ -2.24
HIF1A-210ENST00000557206 NOTCH1P46531 2555 aa1.03□□□□□ -2.24
HIF1A-210ENST00000557206 NBEAL1Q6ZS30 2694 aa1.02□□□□□ -2.25
HIF1A-210ENST00000557206 DEFB136Q30KP8 78 aa1.02□□□□□ -2.25
HIF1A-210ENST00000557206 LELP1Q5T871 98 aa1.02□□□□□ -2.25
HIF1A-210ENST00000557206 SMR3AQ99954 134 aa1.02□□□□□ -2.25
HIF1A-210ENST00000557206 RHPN1-AS1Q9BWJ2 59 aa1.02□□□□□ -2.25
HIF1A-210ENST00000557206 NBPF19A0A087WUL8 3843 aa1.01□□□□□ -2.25
HIF1A-210ENST00000557206 K7EIM0 57 aa1.01□□□□□ -2.25
HIF1A-210ENST00000557206 DEFB130BP0DP73 79 aa1.01□□□□□ -2.25
HIF1A-210ENST00000557206 DEFB130AP0DP74 79 aa1.01□□□□□ -2.25
HIF1A-210ENST00000557206 HTN1P15515 57 aa1.01□□□□□ -2.25
HIF1A-210ENST00000557206 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
HIF1A-210ENST00000557206 DEFB131AP59861 70 aa1□□□□□ -2.25
HIF1A-210ENST00000557206 VPS13CQ709C8 3753 aa1□□□□□ -2.25
HIF1A-210ENST00000557206 PKD1L1Q8TDX9 2849 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 STAB2Q8WWQ8 2551 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 SPART-AS1P0CW21 52 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 KLK9Q2XQG4 91 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 DEFB135Q30KP9 77 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 WFDC10BQ8IUB3 73 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 VWFP04275 2813 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 SVEP1Q4LDE5 3571 aa0.99□□□□□ -2.25
HIF1A-210ENST00000557206 HTN3P15516 51 aa0.98□□□□□ -2.25
HIF1A-210ENST00000557206 NBEAL2Q6ZNJ1 2754 aa0.97□□□□□ -2.25
HIF1A-210ENST00000557206 NOP10Q9NPE3 64 aaKnown RBP0.97□□□□□ -2.25
HIF1A-210ENST00000557206 ZNF469Q96JG9 3925 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-210ENST00000557206 TENM3Q9P273 2699 aa0.96□□□□□ -2.26
HIF1A-210ENST00000557206 AKAP9Q99996 3911 aa0.96□□□□□ -2.26
HIF1A-210ENST00000557206 MEGF8Q7Z7M0 2845 aa0.96□□□□□ -2.26
HIF1A-210ENST00000557206 TGP01266 2768 aa0.96□□□□□ -2.26
HIF1A-210ENST00000557206 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
HIF1A-210ENST00000557206 A8MTW9 85 aa0.95□□□□□ -2.26
HIF1A-210ENST00000557206 H3BNG1 76 aa0.95□□□□□ -2.26
HIF1A-210ENST00000557206 DEFB4AO15263 64 aa0.95□□□□□ -2.26
HIF1A-210ENST00000557206 DEFB1P60022 68 aa0.95□□□□□ -2.26
HIF1A-210ENST00000557206 CUBNO60494 3623 aa0.95□□□□□ -2.26
HIF1A-210ENST00000557206 IGLV5-48A0A075B6I7 105 aa0.94□□□□□ -2.26
HIF1A-210ENST00000557206 A0A096LPF7 62 aa0.94□□□□□ -2.26
HIF1A-210ENST00000557206 RPL39LQ96EH5 51 aaKnown RBP0.94□□□□□ -2.26
HIF1A-210ENST00000557206 TENM2Q9NT68 2774 aa0.94□□□□□ -2.26
HIF1A-210ENST00000557206 ANK2Q01484 3957 aa0.93□□□□□ -2.26
HIF1A-210ENST00000557206 M0QY20 66 aa0.93□□□□□ -2.26
HIF1A-210ENST00000557206 PRLHP81277 87 aa0.93□□□□□ -2.26
HIF1A-210ENST00000557206 LINC01556Q5JQF7 62 aa0.93□□□□□ -2.26
HIF1A-210ENST00000557206 CLPSL2Q6UWE3 100 aa0.93□□□□□ -2.26
HIF1A-210ENST00000557206 TOMM7Q9P0U1 55 aa0.93□□□□□ -2.26
HIF1A-210ENST00000557206 COL7A1Q02388 2944 aa0.92□□□□□ -2.26
HIF1A-210ENST00000557206 ANK3Q12955 4377 aaKnown RBP0.92□□□□□ -2.26
HIF1A-210ENST00000557206 RPL39P62891 51 aaKnown RBP0.92□□□□□ -2.26
HIF1A-210ENST00000557206 S4R3F8 94 aa0.92□□□□□ -2.26
HIF1A-210ENST00000557206 TRRAPQ9Y4A5 3859 aa0.91□□□□□ -2.26
HIF1A-210ENST00000557206 POLR2KP53803 58 aaKnown RBP0.91□□□□□ -2.26
HIF1A-210ENST00000557206 DEFB104AQ8WTQ1 72 aa0.91□□□□□ -2.26
HIF1A-210ENST00000557206 MMP24-AS1A0A0U1RRL7 71 aa0.89□□□□□ -2.27
HIF1A-210ENST00000557206 DNHD1Q96M86 4753 aa0.88□□□□□ -2.27
HIF1A-210ENST00000557206 PRKDCP78527 4128 aaKnown RBP0.87□□□□□ -2.27
HIF1A-210ENST00000557206 A0A096LNI7 61 aa0.86□□□□□ -2.27
HIF1A-210ENST00000557206 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
HIF1A-210ENST00000557206 DMBT1Q9UGM3 2413 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-210ENST00000557206 CSMD3Q7Z407 3707 aa0.84□□□□□ -2.27
HIF1A-210ENST00000557206 DNAH9Q9NYC9 4486 aa0.84□□□□□ -2.27
HIF1A-210ENST00000557206 SPINK1P00995 79 aa0.84□□□□□ -2.27
HIF1A-210ENST00000557206 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.28
HIF1A-210ENST00000557206 DNAH3Q8TD57 4116 aa0.84□□□□□ -2.28
HIF1A-210ENST00000557206 ALMS1Q8TCU4 4167 aa0.83□□□□□ -2.28
HIF1A-210ENST00000557206 LYSTQ99698 3801 aa0.83□□□□□ -2.28
HIF1A-210ENST00000557206 STARD9Q9P2P6 4700 aa0.83□□□□□ -2.28
HIF1A-210ENST00000557206 CMYA5Q8N3K9 4069 aa0.83□□□□□ -2.28
HIF1A-210ENST00000557206 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
HIF1A-210ENST00000557206 PLECQ15149 4684 aaKnown RBP0.82□□□□□ -2.28
HIF1A-210ENST00000557206 DNAH7Q8WXX0 4024 aa0.82□□□□□ -2.28
HIF1A-210ENST00000557206 SMR3BP02814 79 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-210ENST00000557206 M0R2T5 61 aa0.8□□□□□ -2.28
HIF1A-210ENST00000557206 RPS29P62273 56 aaKnown RBP0.8□□□□□ -2.28
HIF1A-210ENST00000557206 KMT2CQ8NEZ4 4911 aaKnown RBP0.8□□□□□ -2.28
HIF1A-210ENST00000557206 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
HIF1A-210ENST00000557206 DNAH1Q9P2D7 4330 aa0.8□□□□□ -2.28
HIF1A-210ENST00000557206 VPS13DQ5THJ4 4388 aa0.8□□□□□ -2.28
HIF1A-210ENST00000557206 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
HIF1A-210ENST00000557206 PKHD1P08F94 4074 aa0.79□□□□□ -2.28
HIF1A-210ENST00000557206 DYNC2H1Q8NCM8 4307 aaKnown RBP0.79□□□□□ -2.28
HIF1A-210ENST00000557206 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
HIF1A-210ENST00000557206 DNAH2Q9P225 4427 aa0.78□□□□□ -2.28
HIF1A-210ENST00000557206 SACSQ9NZJ4 4579 aa0.78□□□□□ -2.28
HIF1A-210ENST00000557206 KMT2AQ03164 3969 aa0.78□□□□□ -2.28
HIF1A-210ENST00000557206 RYR2Q92736 4967 aa0.78□□□□□ -2.29
HIF1A-210ENST00000557206 FRAS1Q86XX4 4008 aa0.78□□□□□ -2.29
HIF1A-210ENST00000557206 DNAH6Q9C0G6 4158 aa0.78□□□□□ -2.29
HIF1A-210ENST00000557206 DNAH17Q9UFH2 4485 aa0.77□□□□□ -2.29
HIF1A-210ENST00000557206 DNAH11Q96DT5 4516 aa0.77□□□□□ -2.29
HIF1A-210ENST00000557206 PKD1P98161 4303 aa0.77□□□□□ -2.29
HIF1A-210ENST00000557206 RYR3Q15413 4870 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 DNAH5Q8TE73 4624 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 FAT2Q9NYQ8 4349 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 C9orf92A6NGG3 77 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 M0QZ58 72 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 HYDINQ4G0P3 5121 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 KIAA1109Q2LD37 5005 aa0.76□□□□□ -2.29
HIF1A-210ENST00000557206 LRP1BQ9NZR2 4599 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms