RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 MT1HP80294 61 aa-0.76□□□□□ -2.53
SCFD1-216ENST00000555550 DEFA5Q01523 94 aa-0.76□□□□□ -2.53
SCFD1-216ENST00000555550 CDC42BPGQ6DT37 1551 aa-0.76□□□□□ -2.53
SCFD1-216ENST00000555550 THOC2Q8NI27 1593 aaKnown RBP-0.76□□□□□ -2.53
SCFD1-216ENST00000555550 DNAH17Q9UFH2 4485 aa-0.77□□□□□ -2.53
SCFD1-216ENST00000555550 LRRIQ1Q96JM4 1722 aa-0.77□□□□□ -2.53
SCFD1-216ENST00000555550 RPS27P42677 84 aaKnown RBP-0.77□□□□□ -2.53
SCFD1-216ENST00000555550 ADIRFQ15847 76 aa-0.77□□□□□ -2.53
SCFD1-216ENST00000555550 RPS27LQ71UM5 84 aaKnown RBP-0.77□□□□□ -2.53
SCFD1-216ENST00000555550 DNAH10Q8IVF4 4471 aa-0.77□□□□□ -2.53
SCFD1-216ENST00000555550 IQGAP3Q86VI3 1631 aa-0.78□□□□□ -2.53
SCFD1-216ENST00000555550 LMTK2Q8IWU2 1503 aa-0.78□□□□□ -2.53
SCFD1-216ENST00000555550 ASXL1Q8IXJ9 1541 aa-0.78□□□□□ -2.53
SCFD1-216ENST00000555550 S100A13Q99584 98 aa-0.79□□□□□ -2.54
SCFD1-216ENST00000555550 TOGARAM1Q9Y4F4 1720 aa-0.79□□□□□ -2.54
SCFD1-216ENST00000555550 KIAA0586Q9BVV6 1533 aa-0.79□□□□□ -2.54
SCFD1-216ENST00000555550 ANKARQ7Z5J8 1434 aa-0.8□□□□□ -2.54
SCFD1-216ENST00000555550 MYO5CQ9NQX4 1742 aa-0.8□□□□□ -2.54
SCFD1-216ENST00000555550 KIF1AQ12756 1690 aa-0.8□□□□□ -2.54
SCFD1-216ENST00000555550 RALGAPBQ86X10 1494 aa-0.8□□□□□ -2.54
SCFD1-216ENST00000555550 ANKRD36CQ5JPF3 1778 aa-0.81□□□□□ -2.54
SCFD1-216ENST00000555550 C3P01024 1663 aa-0.81□□□□□ -2.54
SCFD1-216ENST00000555550 SCRIBQ14160 1630 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 WT1-ASQ06250 92 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 NCBP2-AS2Q69YL0 99 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 ENHOQ6UWT2 76 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 KRTAP8-1Q8IUC2 63 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 DEFB106AQ8N104 65 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 ABCA9Q8IUA7 1624 aa-0.82□□□□□ -2.54
SCFD1-216ENST00000555550 A0A087WXM4 84 aa-0.83□□□□□ -2.54
SCFD1-216ENST00000555550 HFM1A2PYH4 1435 aa-0.83□□□□□ -2.54
SCFD1-216ENST00000555550 CLASP1Q7Z460 1538 aa-0.84□□□□□ -2.54
SCFD1-216ENST00000555550 MT1BP07438 61 aa-0.84□□□□□ -2.54
SCFD1-216ENST00000555550 IGLV5-48A0A075B6I7 105 aa-0.85□□□□□ -2.55
SCFD1-216ENST00000555550 ETDCA0A1B0GVM5 59 aa-0.85□□□□□ -2.55
SCFD1-216ENST00000555550 DEFB114Q30KQ6 69 aa-0.85□□□□□ -2.55
SCFD1-216ENST00000555550 UBL5Q9BZL1 73 aa-0.86□□□□□ -2.55
SCFD1-216ENST00000555550 UGGT2Q9NYU1 1516 aa-0.86□□□□□ -2.55
SCFD1-216ENST00000555550 DMDP11532 3685 aa-0.86□□□□□ -2.55
SCFD1-216ENST00000555550 ABCC6O95255 1503 aa-0.87□□□□□ -2.55
SCFD1-216ENST00000555550 DEFB110Q30KQ9 67 aa-0.87□□□□□ -2.55
SCFD1-216ENST00000555550 LY75O60449 1722 aa-0.88□□□□□ -2.55
SCFD1-216ENST00000555550 MRPL33O75394 65 aaKnown RBP-0.88□□□□□ -2.55
SCFD1-216ENST00000555550 MT1XP80297 61 aa-0.89□□□□□ -2.55
SCFD1-216ENST00000555550 MAST1Q9Y2H9 1570 aa-0.89□□□□□ -2.55
SCFD1-216ENST00000555550 HILPDAQ9Y5L2 63 aa-0.9□□□□□ -2.55
SCFD1-216ENST00000555550 CDC42BPAQ5VT25 1732 aa-0.9□□□□□ -2.55
SCFD1-216ENST00000555550 MADDQ8WXG6 1647 aa-0.9□□□□□ -2.55
SCFD1-216ENST00000555550 GLI2P10070 1586 aa-0.91□□□□□ -2.55
SCFD1-216ENST00000555550 MT1EP04732 61 aa-0.91□□□□□ -2.56
SCFD1-216ENST00000555550 TIAM1Q13009 1591 aa-0.91□□□□□ -2.56
SCFD1-216ENST00000555550 DNMBPQ6XZF7 1577 aa-0.91□□□□□ -2.56
SCFD1-216ENST00000555550 DUOX2Q9NRD8 1548 aa-0.92□□□□□ -2.56
SCFD1-216ENST00000555550 H3BVH4 76 aa-0.92□□□□□ -2.56
SCFD1-216ENST00000555550 MINOS1Q5TGZ0 78 aa-0.92□□□□□ -2.56
SCFD1-216ENST00000555550 CROCC2H7BZ55 1655 aa-0.92□□□□□ -2.56
SCFD1-216ENST00000555550 MMP24-AS1A0A0U1RRL7 71 aa-0.93□□□□□ -2.56
SCFD1-216ENST00000555550 MT1HL1P0DM35 61 aa-0.93□□□□□ -2.56
SCFD1-216ENST00000555550 DEFB1P60022 68 aa-0.93□□□□□ -2.56
SCFD1-216ENST00000555550 MROH1Q8NDA8 1641 aa-0.93□□□□□ -2.56
SCFD1-216ENST00000555550 ATXN8Q156A1 80 aa-0.94□□□□□ -2.56
SCFD1-216ENST00000555550 C6orf48Q9UBA6 75 aa-0.94□□□□□ -2.56
SCFD1-216ENST00000555550 ABCA6Q8N139 1617 aa-0.94□□□□□ -2.56
SCFD1-216ENST00000555550 TNP1P09430 55 aa-0.95□□□□□ -2.56
SCFD1-216ENST00000555550 SFTA3P0C7M3 94 aa-0.96□□□□□ -2.56
SCFD1-216ENST00000555550 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.96□□□□□ -2.56
SCFD1-216ENST00000555550 MT1LQ93083 61 aa-0.97□□□□□ -2.56
SCFD1-216ENST00000555550 SMCO4Q9NRQ5 59 aa-0.98□□□□□ -2.57
SCFD1-216ENST00000555550 LINC01549A6NIU2 74 aa-0.99□□□□□ -2.57
SCFD1-216ENST00000555550 IGIPA6NJ69 53 aa-0.99□□□□□ -2.57
SCFD1-216ENST00000555550 EFCAB5A4FU69 1503 aa-0.99□□□□□ -2.57
SCFD1-216ENST00000555550 H3BUA1 57 aa-1□□□□□ -2.57
SCFD1-216ENST00000555550 PDCD5O14737 125 aa-1□□□□□ -2.57
SCFD1-216ENST00000555550 FCER1GP30273 86 aa-1□□□□□ -2.57
SCFD1-216ENST00000555550 CLPSL2Q6UWE3 100 aa-1.01□□□□□ -2.57
SCFD1-216ENST00000555550 A0A1B0GUL6 1792 aa-1.02□□□□□ -2.57
SCFD1-216ENST00000555550 ALS2Q96Q42 1657 aa-1.02□□□□□ -2.57
SCFD1-216ENST00000555550 K7EMI3 77 aa-1.03□□□□□ -2.57
SCFD1-216ENST00000555550 MT1FP04733 61 aa-1.03□□□□□ -2.57
SCFD1-216ENST00000555550 NOP10Q9NPE3 64 aaKnown RBP-1.03□□□□□ -2.57
SCFD1-216ENST00000555550 M0R1W7 72 aa-1.04□□□□□ -2.58
SCFD1-216ENST00000555550 KIF21BO75037 1637 aa-1.04□□□□□ -2.58
SCFD1-216ENST00000555550 M0QZ58 72 aa-1.05□□□□□ -2.58
SCFD1-216ENST00000555550 FAM208AQ9UK61 1670 aaKnown RBP-1.05□□□□□ -2.58
SCFD1-216ENST00000555550 CCDC180Q9P1Z9 1646 aa-1.06□□□□□ -2.58
SCFD1-216ENST00000555550 EEA1Q15075 1411 aa-1.06□□□□□ -2.58
SCFD1-216ENST00000555550 M0QY20 66 aa-1.07□□□□□ -2.58
SCFD1-216ENST00000555550 MT1GP13640 62 aa-1.07□□□□□ -2.58
SCFD1-216ENST00000555550 AGLP35573 1532 aa-1.07□□□□□ -2.58
SCFD1-216ENST00000555550 A8MTW9 85 aa-1.08□□□□□ -2.58
SCFD1-216ENST00000555550 LINC00308Q8TCZ7 52 aa-1.08□□□□□ -2.58
SCFD1-216ENST00000555550 GNG13Q9P2W3 67 aa-1.08□□□□□ -2.58
SCFD1-216ENST00000555550 A0A087WWC5 75 aa-1.09□□□□□ -2.58
SCFD1-216ENST00000555550 MT1MQ8N339 61 aa-1.09□□□□□ -2.58
SCFD1-216ENST00000555550 LMO7Q8WWI1 1683 aa-1.1□□□□□ -2.58
SCFD1-216ENST00000555550 ABCA10Q8WWZ4 1543 aa-1.1□□□□□ -2.59
SCFD1-216ENST00000555550 UGGT1Q9NYU2 1555 aa-1.11□□□□□ -2.59
SCFD1-216ENST00000555550 MT2AP02795 61 aa-1.11□□□□□ -2.59
SCFD1-216ENST00000555550 KAAG1Q9UBP8 84 aa-1.11□□□□□ -2.59
SCFD1-216ENST00000555550 EFCAB6Q5THR3 1501 aa-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms