RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DMAC1Q96GE9 116 aa1.61□□□□□ -2.15
PRPF39-206ENST00000554429 ANGP03950 147 aaKnown RBP1.61□□□□□ -2.15
PRPF39-206ENST00000554429 C14orf177Q52M58 125 aa1.61□□□□□ -2.15
PRPF39-206ENST00000554429 WFDC10BQ8IUB3 73 aa1.61□□□□□ -2.15
PRPF39-206ENST00000554429 Q9BRP9 147 aa1.61□□□□□ -2.15
PRPF39-206ENST00000554429 A0A1B0GU33 70 aa1.6□□□□□ -2.15
PRPF39-206ENST00000554429 CNBPP62633 177 aaKnown RBP1.6□□□□□ -2.15
PRPF39-206ENST00000554429 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
PRPF39-206ENST00000554429 Q6ZQY7 126 aa1.6□□□□□ -2.15
PRPF39-206ENST00000554429 FAM168BA1KXE4 195 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 H0Y9P7 68 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 SMR3BP02814 79 aaPredicted RBP1.59□□□□□ -2.15
PRPF39-206ENST00000554429 KRTAP4-3Q9BYR4 195 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 PLAC8Q9NZF1 115 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 ZNF861PO60384 105 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 Q5W150 140 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 OBSCN-AS1Q96MR7 158 aa1.59□□□□□ -2.15
PRPF39-206ENST00000554429 A0A096LNI7 61 aa1.59□□□□□ -2.16
PRPF39-206ENST00000554429 LINC00959A0A1B0GUT2 108 aa1.59□□□□□ -2.16
PRPF39-206ENST00000554429 NDUFB1O75438 58 aa1.58□□□□□ -2.16
PRPF39-206ENST00000554429 RPL37AP61513 92 aaKnown RBP1.58□□□□□ -2.16
PRPF39-206ENST00000554429 A0A1B0GUV1 79 aa1.58□□□□□ -2.16
PRPF39-206ENST00000554429 KRTAP10-8P60410 259 aa1.58□□□□□ -2.16
PRPF39-206ENST00000554429 LRP1Q07954 4544 aaKnown RBP1.57□□□□□ -2.16
PRPF39-206ENST00000554429 ZCCHC13Q8WW36 166 aaKnown RBP1.57□□□□□ -2.16
PRPF39-206ENST00000554429 LINC00304Q8N9R0 145 aa1.57□□□□□ -2.16
PRPF39-206ENST00000554429 KRTAP2-2Q9BYT5 123 aa1.57□□□□□ -2.16
PRPF39-206ENST00000554429 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-206ENST00000554429 UQCR11O14957 56 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 SPACA4Q8TDM5 124 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 R4GN34 69 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 COA5Q86WW8 74 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 ST20-AS1Q8NBB2 130 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 SPRR4Q96PI1 79 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 H0YGX0 51 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 PDE6GP18545 87 aa1.56□□□□□ -2.16
PRPF39-206ENST00000554429 JMJD7-PLA2G4BH0Y9G9 81 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 LINC00575Q6W349 94 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 WFDC13Q8IUB5 93 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 IGKV4-1P06312 121 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
PRPF39-206ENST00000554429 IGKV2D-24A0A075B6R9 120 aa1.54□□□□□ -2.16
PRPF39-206ENST00000554429 IGKV2-24A0A0C4DH68 120 aa1.54□□□□□ -2.16
PRPF39-206ENST00000554429 MUC17Q685J3 4493 aa1.54□□□□□ -2.16
PRPF39-206ENST00000554429 Q96NJ1 140 aa1.54□□□□□ -2.16
PRPF39-206ENST00000554429 C6orf48Q9UBA6 75 aa1.54□□□□□ -2.16
PRPF39-206ENST00000554429 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
PRPF39-206ENST00000554429 GVQW2A0A096LPI5 108 aaPredicted RBP1.53□□□□□ -2.16
PRPF39-206ENST00000554429 A0A1B0GU69 56 aa1.53□□□□□ -2.16
PRPF39-206ENST00000554429 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
PRPF39-206ENST00000554429 COX7BP24311 80 aa1.53□□□□□ -2.17
PRPF39-206ENST00000554429 Q8IZM0 81 aa1.53□□□□□ -2.17
PRPF39-206ENST00000554429 K7EQZ3 153 aa1.52□□□□□ -2.17
PRPF39-206ENST00000554429 PRLHP81277 87 aa1.52□□□□□ -2.17
PRPF39-206ENST00000554429 PRO2289Q9P1D8 64 aa1.52□□□□□ -2.17
PRPF39-206ENST00000554429 PSORS1C2Q9UIG4 136 aa1.52□□□□□ -2.17
PRPF39-206ENST00000554429 ETDCA0A1B0GVM5 59 aa1.51□□□□□ -2.17
PRPF39-206ENST00000554429 TPRXLQ17RH7 258 aa1.51□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
PRPF39-206ENST00000554429 PCOTHQ58A44 107 aa1.51□□□□□ -2.17
PRPF39-206ENST00000554429 HRES1P13985 223 aa1.51□□□□□ -2.17
PRPF39-206ENST00000554429 SSBP3-AS1Q7Z2R9 100 aa1.51□□□□□ -2.17
PRPF39-206ENST00000554429 IGLV6-57P01721 117 aa1.5□□□□□ -2.17
PRPF39-206ENST00000554429 ACYP2P14621 99 aa1.5□□□□□ -2.17
PRPF39-206ENST00000554429 ANAPC11Q9NYG5 84 aa1.5□□□□□ -2.17
PRPF39-206ENST00000554429 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
PRPF39-206ENST00000554429 LRP2P98164 4655 aa1.5□□□□□ -2.17
PRPF39-206ENST00000554429 LOC110117498A0A087WWA1 95 aa1.49□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP1-4P0C5Y4 121 aa1.49□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
PRPF39-206ENST00000554429 KCNQ1DNQ9H478 68 aa1.48□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
PRPF39-206ENST00000554429 DSCR10P59022 87 aa1.48□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP9-6A8MVA2 160 aa1.47□□□□□ -2.17
PRPF39-206ENST00000554429 COX17Q14061 63 aa1.47□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP11-1Q8IUC1 163 aa1.47□□□□□ -2.17
PRPF39-206ENST00000554429 KRTAP7-1Q8IUC3 87 aa1.47□□□□□ -2.17
PRPF39-206ENST00000554429 IGKV2-30P06310 120 aa1.47□□□□□ -2.17
PRPF39-206ENST00000554429 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
PRPF39-206ENST00000554429 IGFL1Q6UW32 110 aa1.46□□□□□ -2.18
PRPF39-206ENST00000554429 Q6ZRX8 168 aa1.46□□□□□ -2.18
PRPF39-206ENST00000554429 LPAP08519 4548 aa1.45□□□□□ -2.18
PRPF39-206ENST00000554429 KRTAP13-1Q8IUC0 172 aa1.44□□□□□ -2.18
PRPF39-206ENST00000554429 SPRR5A0A1B0GTR4 108 aa1.44□□□□□ -2.18
PRPF39-206ENST00000554429 SPINK1P00995 79 aa1.44□□□□□ -2.18
PRPF39-206ENST00000554429 IGLV5-48A0A075B6I7 105 aa1.43□□□□□ -2.18
PRPF39-206ENST00000554429 IGKV2D-30A0A075B6S6 120 aa1.43□□□□□ -2.18
PRPF39-206ENST00000554429 RPS29P62273 56 aaKnown RBP1.43□□□□□ -2.18
PRPF39-206ENST00000554429 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
PRPF39-206ENST00000554429 KRTAP10-5P60370 271 aa1.41□□□□□ -2.18
PRPF39-206ENST00000554429 KRTAP13-2Q52LG2 175 aa1.41□□□□□ -2.18
PRPF39-206ENST00000554429 KRTAP19-2Q3LHN2 52 aa1.41□□□□□ -2.18
PRPF39-206ENST00000554429 KRTAP13-3Q3SY46 172 aa1.41□□□□□ -2.18
PRPF39-206ENST00000554429 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
PRPF39-206ENST00000554429 SPRR1AP35321 89 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms