RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KLKP1Q107X0 134 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 C9orf153Q5TBE3 101 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 COX7B2Q8TF08 81 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 LINC00208Q96KT6 92 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 DSCR8Q96T75 97 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 AMELXQ99217 191 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 C20orf78Q9BR46 151 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 SMIM2Q9BVW6 85 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 MANBALQ9NQG1 85 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 ETDCA0A1B0GVM5 59 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 IGIPA6NJ69 53 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 D6R8Y8 96 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 SMIM6P0DI80 62 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 MEIG1Q5JSS6 88 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 C2orf88Q9BSF0 95 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 SEC11CQ9BY50 192 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 KCNQ1DNQ9H478 68 aa0.93□□□□□ -2.26
SCFD1-210ENST00000553693 UMAD1C9J7I0 102 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 SPINK8P0C7L1 97 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 SPRR2EP22531 72 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 SPRR2BP35325 72 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 SPRR2AP35326 72 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 SEC11AP67812 179 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 S100A7L2Q5SY68 101 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 SPTSSBQ8NFR3 76 aa0.92□□□□□ -2.26
SCFD1-210ENST00000553693 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
SCFD1-210ENST00000553693 TRBV10-3A0A0K0K1G6 114 aa0.91□□□□□ -2.26
SCFD1-210ENST00000553693 PLAC4Q8WY50 150 aa0.91□□□□□ -2.26
SCFD1-210ENST00000553693 V9GYV3 84 aa0.91□□□□□ -2.26
SCFD1-210ENST00000553693 SMIM27A0A1W2PRY6 76 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 SPRR1BP22528 89 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 LINC00158P58513 81 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 COX17Q14061 63 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 MRPL54Q6P161 138 aaKnown RBP0.9□□□□□ -2.27
SCFD1-210ENST00000553693 ALKAL2Q6UX46 152 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 Q6ZRX8 168 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 C20orf197Q8N268 126 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 Q8N8P6 123 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 S100ZQ8WXG8 99 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 SPANXDQ9BXN6 97 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 PRO1933Q9H354 126 aa0.9□□□□□ -2.27
SCFD1-210ENST00000553693 KANTRA0A1W2PQU2 76 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 MT1BP07438 61 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 SMIM13P0DJ93 91 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 SPRR2DP22532 72 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 Q96NJ1 140 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 SERP1Q9Y6X1 66 aa0.89□□□□□ -2.27
SCFD1-210ENST00000553693 S100A8P05109 93 aa0.88□□□□□ -2.27
SCFD1-210ENST00000553693 IGLC3P0DOY3 106 aa0.88□□□□□ -2.27
SCFD1-210ENST00000553693 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
SCFD1-210ENST00000553693 NXT2Q9NPJ8 142 aaKnown RBP0.88□□□□□ -2.27
SCFD1-210ENST00000553693 A0A1B0GV90 55 aa0.87□□□□□ -2.27
SCFD1-210ENST00000553693 K7EMI3 77 aa0.87□□□□□ -2.27
SCFD1-210ENST00000553693 DLEU1O43261 78 aa0.87□□□□□ -2.27
SCFD1-210ENST00000553693 ELOF1P60002 83 aaKnown RBP0.87□□□□□ -2.27
SCFD1-210ENST00000553693 NPC2P61916 151 aa0.87□□□□□ -2.27
SCFD1-210ENST00000553693 ADIRFQ15847 76 aa0.87□□□□□ -2.27
SCFD1-210ENST00000553693 LINC01546A6NGU7 62 aa0.86□□□□□ -2.27
SCFD1-210ENST00000553693 S100A1P23297 94 aa0.86□□□□□ -2.27
SCFD1-210ENST00000553693 RBM3P98179 157 aaKnown RBP0.86□□□□□ -2.27
SCFD1-210ENST00000553693 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
SCFD1-210ENST00000553693 TMEM170BQ5T4T1 132 aa0.86□□□□□ -2.27
SCFD1-210ENST00000553693 Q5VV11 94 aa0.86□□□□□ -2.27
SCFD1-210ENST00000553693 SFTA2Q6UW10 78 aa0.86□□□□□ -2.27
SCFD1-210ENST00000553693 IGLV5-48A0A075B6I7 105 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 TRAV13-2A0A0B4J235 113 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 TRBV7-7A0A0K0K1E9 115 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 COX7BP24311 80 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 BAGE3Q86Y29 109 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 SVBPQ8N300 66 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 PRR15LQ9BU68 103 aa0.85□□□□□ -2.27
SCFD1-210ENST00000553693 LINC01549A6NIU2 74 aa0.84□□□□□ -2.27
SCFD1-210ENST00000553693 LINC00587B1AMM8 73 aa0.84□□□□□ -2.27
SCFD1-210ENST00000553693 PMCHL1Q16048 86 aa0.84□□□□□ -2.27
SCFD1-210ENST00000553693 GTF2H5Q6ZYL4 71 aa0.84□□□□□ -2.27
SCFD1-210ENST00000553693 KRTAP8-1Q8IUC2 63 aa0.84□□□□□ -2.27
SCFD1-210ENST00000553693 MYMXA0A1B0GTQ4 84 aa0.83□□□□□ -2.28
SCFD1-210ENST00000553693 HCG22E2RYF7 251 aa0.83□□□□□ -2.28
SCFD1-210ENST00000553693 ACYP2P14621 99 aa0.83□□□□□ -2.28
SCFD1-210ENST00000553693 SPINK7P58062 85 aa0.83□□□□□ -2.28
SCFD1-210ENST00000553693 SPRR2GQ9BYE4 73 aa0.83□□□□□ -2.28
SCFD1-210ENST00000553693 S100PP25815 95 aa0.82□□□□□ -2.28
SCFD1-210ENST00000553693 PEA15Q15121 130 aa0.82□□□□□ -2.28
SCFD1-210ENST00000553693 H1FX-AS1Q4G0G2 97 aa0.82□□□□□ -2.28
SCFD1-210ENST00000553693 WFDC13Q8IUB5 93 aa0.82□□□□□ -2.28
SCFD1-210ENST00000553693 SMIM11BQ8TCY0 68 aa0.82□□□□□ -2.28
SCFD1-210ENST00000553693 SMCO4Q9NRQ5 59 aa0.82□□□□□ -2.28
SCFD1-210ENST00000553693 F8WEM9 126 aa0.81□□□□□ -2.28
SCFD1-210ENST00000553693 H3BUT2 72 aa0.81□□□□□ -2.28
SCFD1-210ENST00000553693 Q6JHZ5 121 aa0.81□□□□□ -2.28
SCFD1-210ENST00000553693 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
SCFD1-210ENST00000553693 LINC00308Q8TCZ7 52 aa0.81□□□□□ -2.28
SCFD1-210ENST00000553693 MT1XP80297 61 aa0.8□□□□□ -2.28
SCFD1-210ENST00000553693 C18orf32Q8TCD1 76 aa0.8□□□□□ -2.28
SCFD1-210ENST00000553693 CYP4F30PQ9H0H9 118 aa0.8□□□□□ -2.28
SCFD1-210ENST00000553693 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
SCFD1-210ENST00000553693 ZNF815PA8K554 130 aa0.79□□□□□ -2.28
SCFD1-210ENST00000553693 MT4P47944 62 aa0.79□□□□□ -2.28
SCFD1-210ENST00000553693 ATP5EP56381 51 aaPredicted RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms