RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.94
CCNT1-204ENST00000551989 K7ERS5 55 aa2.96□□□□□ -1.94
CCNT1-204ENST00000551989 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
CCNT1-204ENST00000551989 DNAH2Q9P225 4427 aa2.93□□□□□ -1.94
CCNT1-204ENST00000551989 SRRM2Q9UQ35 2752 aaKnown RBP2.92□□□□□ -1.94
CCNT1-204ENST00000551989 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
CCNT1-204ENST00000551989 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.95
CCNT1-204ENST00000551989 KMT2AQ03164 3969 aa2.9□□□□□ -1.95
CCNT1-204ENST00000551989 FRAS1Q86XX4 4008 aa2.9□□□□□ -1.95
CCNT1-204ENST00000551989 A0A1B0GU33 70 aa2.89□□□□□ -1.95
CCNT1-204ENST00000551989 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
CCNT1-204ENST00000551989 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
CCNT1-204ENST00000551989 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
CCNT1-204ENST00000551989 DNAH11Q96DT5 4516 aa2.89□□□□□ -1.95
CCNT1-204ENST00000551989 KRTAP10-4P60372 401 aaPredicted RBP2.88□□□□□ -1.95
CCNT1-204ENST00000551989 H1FX-AS1Q4G0G2 97 aa2.88□□□□□ -1.95
CCNT1-204ENST00000551989 MEGF8Q7Z7M0 2845 aa2.87□□□□□ -1.95
CCNT1-204ENST00000551989 FBN3Q75N90 2809 aa2.87□□□□□ -1.95
CCNT1-204ENST00000551989 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
CCNT1-204ENST00000551989 SACSQ9NZJ4 4579 aa2.86□□□□□ -1.95
CCNT1-204ENST00000551989 C9orf92A6NGG3 77 aa2.85□□□□□ -1.95
CCNT1-204ENST00000551989 H0YAA0 97 aa2.85□□□□□ -1.95
CCNT1-204ENST00000551989 RPL37P61927 97 aaKnown RBP2.83□□□□□ -1.96
CCNT1-204ENST00000551989 PKD1P98161 4303 aa2.83□□□□□ -1.96
CCNT1-204ENST00000551989 SMR3BP02814 79 aaPredicted RBP2.82□□□□□ -1.96
CCNT1-204ENST00000551989 CSAG1Q6PB30 78 aa2.82□□□□□ -1.96
CCNT1-204ENST00000551989 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
CCNT1-204ENST00000551989 TGP01266 2768 aa2.81□□□□□ -1.96
CCNT1-204ENST00000551989 KRTAP10-8P60410 259 aa2.81□□□□□ -1.96
CCNT1-204ENST00000551989 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
CCNT1-204ENST00000551989 ROMO1P60602 79 aa2.79□□□□□ -1.96
CCNT1-204ENST00000551989 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
CCNT1-204ENST00000551989 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
CCNT1-204ENST00000551989 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
CCNT1-204ENST00000551989 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
CCNT1-204ENST00000551989 S4R3F8 94 aa2.78□□□□□ -1.96
CCNT1-204ENST00000551989 PKHD1L1Q86WI1 4243 aa2.77□□□□□ -1.97
CCNT1-204ENST00000551989 LRP1BQ9NZR2 4599 aa2.77□□□□□ -1.97
CCNT1-204ENST00000551989 Q5VSD8 79 aa2.75□□□□□ -1.97
CCNT1-204ENST00000551989 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
CCNT1-204ENST00000551989 PKHD1P08F94 4074 aa2.74□□□□□ -1.97
CCNT1-204ENST00000551989 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
CCNT1-204ENST00000551989 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
CCNT1-204ENST00000551989 HYDINQ4G0P3 5121 aa2.72□□□□□ -1.97
CCNT1-204ENST00000551989 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
CCNT1-204ENST00000551989 M0QZ58 72 aa2.71□□□□□ -1.98
CCNT1-204ENST00000551989 DYNC1H1Q14204 4646 aaKnown RBP2.69□□□□□ -1.98
CCNT1-204ENST00000551989 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
CCNT1-204ENST00000551989 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
CCNT1-204ENST00000551989 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
CCNT1-204ENST00000551989 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
CCNT1-204ENST00000551989 TNXBP22105 4242 aa2.65□□□□□ -1.98
CCNT1-204ENST00000551989 A0A0D9SG42 100 aa2.64□□□□□ -1.99
CCNT1-204ENST00000551989 P0C880 135 aa2.64□□□□□ -1.99
CCNT1-204ENST00000551989 FAT1Q14517 4588 aa2.63□□□□□ -1.99
CCNT1-204ENST00000551989 KRTAP12-1P59990 96 aa2.63□□□□□ -1.99
CCNT1-204ENST00000551989 DMBT1Q9UGM3 2413 aaPredicted RBP2.62□□□□□ -1.99
CCNT1-204ENST00000551989 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
CCNT1-204ENST00000551989 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
CCNT1-204ENST00000551989 DNHD1Q96M86 4753 aa2.61□□□□□ -1.99
CCNT1-204ENST00000551989 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
CCNT1-204ENST00000551989 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CCNT1-204ENST00000551989 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
CCNT1-204ENST00000551989 HSPG2P98160 4391 aa2.59□□□□□ -1.99
CCNT1-204ENST00000551989 LRP1Q07954 4544 aaKnown RBP2.59□□□□□ -1.99
CCNT1-204ENST00000551989 R4GN34 69 aa2.57□□□□□ -2
CCNT1-204ENST00000551989 RYR2Q92736 4967 aa2.56□□□□□ -2
CCNT1-204ENST00000551989 PP632Q6XCG6 107 aa2.54□□□□□ -2
CCNT1-204ENST00000551989 C10orf95Q9H7T3 257 aa2.53□□□□□ -2
CCNT1-204ENST00000551989 RYR1P21817 5038 aa2.5□□□□□ -2.01
CCNT1-204ENST00000551989 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
CCNT1-204ENST00000551989 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
CCNT1-204ENST00000551989 MYCBP2O75592 4640 aa2.47□□□□□ -2.01
CCNT1-204ENST00000551989 KRTAP19-2Q3LHN2 52 aa2.44□□□□□ -2.02
CCNT1-204ENST00000551989 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
CCNT1-204ENST00000551989 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
CCNT1-204ENST00000551989 PLAC4Q8WY50 150 aa2.43□□□□□ -2.02
CCNT1-204ENST00000551989 KRTAP4-1Q9BYQ7 146 aa2.41□□□□□ -2.02
CCNT1-204ENST00000551989 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
CCNT1-204ENST00000551989 MUC17Q685J3 4493 aa2.4□□□□□ -2.02
CCNT1-204ENST00000551989 KMT2CQ8NEZ4 4911 aaKnown RBP2.4□□□□□ -2.02
CCNT1-204ENST00000551989 TNP1P09430 55 aa2.4□□□□□ -2.03
CCNT1-204ENST00000551989 LRP2P98164 4655 aa2.38□□□□□ -2.03
CCNT1-204ENST00000551989 RYR3Q15413 4870 aa2.37□□□□□ -2.03
CCNT1-204ENST00000551989 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
CCNT1-204ENST00000551989 MT3P25713 68 aa2.33□□□□□ -2.04
CCNT1-204ENST00000551989 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
CCNT1-204ENST00000551989 LPAP08519 4548 aa2.33□□□□□ -2.04
CCNT1-204ENST00000551989 INE1O15225 51 aa2.32□□□□□ -2.04
CCNT1-204ENST00000551989 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
CCNT1-204ENST00000551989 KRTAP10-5P60370 271 aa2.31□□□□□ -2.04
CCNT1-204ENST00000551989 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
CCNT1-204ENST00000551989 KRTAP9-6A8MVA2 160 aa2.26□□□□□ -2.05
CCNT1-204ENST00000551989 HERC1Q15751 4861 aa2.24□□□□□ -2.05
CCNT1-204ENST00000551989 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
CCNT1-204ENST00000551989 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
CCNT1-204ENST00000551989 KRTAP19-8Q3LI54 63 aa2.24□□□□□ -2.05
CCNT1-204ENST00000551989 M0R2T5 61 aa2.23□□□□□ -2.05
CCNT1-204ENST00000551989 MT1HP80294 61 aa2.22□□□□□ -2.05
CCNT1-204ENST00000551989 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms