RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 KLKP1Q107X0 134 aa4.54□□□□□ -1.68
VPS29-208ENST00000550267 hDV103S1A0JD37 113 aa4.53□□□□□ -1.68
VPS29-208ENST00000550267 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
VPS29-208ENST00000550267 S4R3F8 94 aa4.52□□□□□ -1.69
VPS29-208ENST00000550267 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
VPS29-208ENST00000550267 S100A6P06703 90 aa4.5□□□□□ -1.69
VPS29-208ENST00000550267 LCA10Q71F78 164 aa4.5□□□□□ -1.69
VPS29-208ENST00000550267 SPRR2DP22532 72 aa4.49□□□□□ -1.69
VPS29-208ENST00000550267 VAMP8Q9BV40 100 aa4.49□□□□□ -1.69
VPS29-208ENST00000550267 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
VPS29-208ENST00000550267 A0A1B0GW54 56 aa4.48□□□□□ -1.69
VPS29-208ENST00000550267 K7EQZ3 153 aa4.48□□□□□ -1.69
VPS29-208ENST00000550267 SCGB1C2P0DMR2 95 aa4.47□□□□□ -1.69
VPS29-208ENST00000550267 NREPQ16612 68 aa4.47□□□□□ -1.69
VPS29-208ENST00000550267 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
VPS29-208ENST00000550267 LOC110117498A0A087WWA1 95 aa4.46□□□□□ -1.7
VPS29-208ENST00000550267 HSD52Q0P140 79 aa4.46□□□□□ -1.7
VPS29-208ENST00000550267 JMJD7-PLA2G4BH0Y9G9 81 aa4.45□□□□□ -1.7
VPS29-208ENST00000550267 S100A1P23297 94 aa4.43□□□□□ -1.7
VPS29-208ENST00000550267 C1orf64Q8NEQ6 169 aa4.43□□□□□ -1.7
VPS29-208ENST00000550267 C14orf132Q9NPU4 83 aa4.43□□□□□ -1.7
VPS29-208ENST00000550267 HCG22E2RYF7 251 aa4.42□□□□□ -1.7
VPS29-208ENST00000550267 PDE6GP18545 87 aa4.42□□□□□ -1.7
VPS29-208ENST00000550267 CRIPTQ9P021 101 aa4.42□□□□□ -1.7
VPS29-208ENST00000550267 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
VPS29-208ENST00000550267 MT1XP80297 61 aa4.39□□□□□ -1.71
VPS29-208ENST00000550267 CASC2Q6XLA1 102 aa4.39□□□□□ -1.71
VPS29-208ENST00000550267 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
VPS29-208ENST00000550267 CXCL6P80162 114 aa4.37□□□□□ -1.71
VPS29-208ENST00000550267 ATXN8Q156A1 80 aa4.37□□□□□ -1.71
VPS29-208ENST00000550267 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
VPS29-208ENST00000550267 Q8N9L7 120 aa4.36□□□□□ -1.71
VPS29-208ENST00000550267 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
VPS29-208ENST00000550267 BPY2O14599 106 aa4.35□□□□□ -1.71
VPS29-208ENST00000550267 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
VPS29-208ENST00000550267 NAA38Q9BRA0 125 aaKnown RBP4.32□□□□□ -1.72
VPS29-208ENST00000550267 A0A087WVE0 104 aa4.31□□□□□ -1.72
VPS29-208ENST00000550267 A8MUN3 132 aa4.28□□□□□ -1.72
VPS29-208ENST00000550267 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
VPS29-208ENST00000550267 PYY3Q5JQD4 70 aa4.27□□□□□ -1.73
VPS29-208ENST00000550267 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
VPS29-208ENST00000550267 H0YAA0 97 aa4.24□□□□□ -1.73
VPS29-208ENST00000550267 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
VPS29-208ENST00000550267 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
VPS29-208ENST00000550267 NDUFC1O43677 76 aa4.18□□□□□ -1.74
VPS29-208ENST00000550267 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
VPS29-208ENST00000550267 TP53AIP1Q9HCN2 124 aa4.17□□□□□ -1.74
VPS29-208ENST00000550267 TSTD3H0UI37 97 aa4.16□□□□□ -1.74
VPS29-208ENST00000550267 H3BT86 120 aa4.16□□□□□ -1.74
VPS29-208ENST00000550267 K7EP34 96 aa4.15□□□□□ -1.75
VPS29-208ENST00000550267 M0R143 59 aa4.15□□□□□ -1.75
VPS29-208ENST00000550267 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
VPS29-208ENST00000550267 R4GN34 69 aa4.13□□□□□ -1.75
VPS29-208ENST00000550267 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
VPS29-208ENST00000550267 UBL5Q9BZL1 73 aa4.1□□□□□ -1.75
VPS29-208ENST00000550267 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
VPS29-208ENST00000550267 M0QZ58 72 aa4.08□□□□□ -1.76
VPS29-208ENST00000550267 P0C880 135 aa4.08□□□□□ -1.76
VPS29-208ENST00000550267 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
VPS29-208ENST00000550267 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
VPS29-208ENST00000550267 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
VPS29-208ENST00000550267 TRAV22A0A0B4J277 110 aa4.05□□□□□ -1.76
VPS29-208ENST00000550267 ACYP1P07311 99 aa4.04□□□□□ -1.76
VPS29-208ENST00000550267 A0A1W2PPM0 123 aa4.02□□□□□ -1.77
VPS29-208ENST00000550267 BATFQ16520 125 aa4.02□□□□□ -1.77
VPS29-208ENST00000550267 C20orf197Q8N268 126 aa4.01□□□□□ -1.77
VPS29-208ENST00000550267 SPCS1Q9Y6A9 102 aa4.01□□□□□ -1.77
VPS29-208ENST00000550267 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
VPS29-208ENST00000550267 TAX1BP3O14907 124 aa3.97□□□□□ -1.77
VPS29-208ENST00000550267 MT4P47944 62 aa3.97□□□□□ -1.77
VPS29-208ENST00000550267 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
VPS29-208ENST00000550267 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
VPS29-208ENST00000550267 H0Y9P7 68 aa3.95□□□□□ -1.78
VPS29-208ENST00000550267 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
VPS29-208ENST00000550267 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
VPS29-208ENST00000550267 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
VPS29-208ENST00000550267 ATOX1O00244 68 aa3.92□□□□□ -1.78
VPS29-208ENST00000550267 MT1EP04732 61 aa3.92□□□□□ -1.78
VPS29-208ENST00000550267 UQCRQO14949 82 aa3.91□□□□□ -1.78
VPS29-208ENST00000550267 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.79
VPS29-208ENST00000550267 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
VPS29-208ENST00000550267 MT-ATP8P03928 68 aa3.88□□□□□ -1.79
VPS29-208ENST00000550267 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
VPS29-208ENST00000550267 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
VPS29-208ENST00000550267 SMIM6P0DI80 62 aa3.81□□□□□ -1.8
VPS29-208ENST00000550267 MT1GP13640 62 aa3.81□□□□□ -1.8
VPS29-208ENST00000550267 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
VPS29-208ENST00000550267 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
VPS29-208ENST00000550267 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
VPS29-208ENST00000550267 DMAC1Q96GE9 116 aa3.77□□□□□ -1.81
VPS29-208ENST00000550267 MT1MQ8N339 61 aa3.76□□□□□ -1.81
VPS29-208ENST00000550267 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
VPS29-208ENST00000550267 MP68P56378 58 aa3.74□□□□□ -1.81
VPS29-208ENST00000550267 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
VPS29-208ENST00000550267 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
VPS29-208ENST00000550267 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
VPS29-208ENST00000550267 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
VPS29-208ENST00000550267 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
VPS29-208ENST00000550267 A0A0D9SG42 100 aa3.68□□□□□ -1.82
VPS29-208ENST00000550267 F8W1H4 67 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms