RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 Q6ZRN7 208 aaPredicted RBP2.31□□□□□ -2.04
PTPRB-207ENST00000549400 Q6ZRX8 168 aa2.31□□□□□ -2.04
PTPRB-207ENST00000549400 PKHD1L1Q86WI1 4243 aa2.3□□□□□ -2.04
PTPRB-207ENST00000549400 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
PTPRB-207ENST00000549400 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
PTPRB-207ENST00000549400 FAT1Q14517 4588 aa2.3□□□□□ -2.04
PTPRB-207ENST00000549400 RYR2Q92736 4967 aa2.3□□□□□ -2.04
PTPRB-207ENST00000549400 PKHD1P08F94 4074 aa2.29□□□□□ -2.04
PTPRB-207ENST00000549400 SPRR1BP22528 89 aa2.29□□□□□ -2.04
PTPRB-207ENST00000549400 C14orf177Q52M58 125 aa2.29□□□□□ -2.04
PTPRB-207ENST00000549400 WFDC13Q8IUB5 93 aa2.29□□□□□ -2.04
PTPRB-207ENST00000549400 Q8N377 158 aa2.29□□□□□ -2.04
PTPRB-207ENST00000549400 VPS13BQ7Z7G8 4022 aa2.28□□□□□ -2.04
PTPRB-207ENST00000549400 A0A087WTM6 91 aa2.28□□□□□ -2.04
PTPRB-207ENST00000549400 NBDYA0A0U1RRE5 68 aa2.28□□□□□ -2.04
PTPRB-207ENST00000549400 FAM168BA1KXE4 195 aa2.28□□□□□ -2.04
PTPRB-207ENST00000549400 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
PTPRB-207ENST00000549400 A0A096LNI7 61 aa2.27□□□□□ -2.05
PTPRB-207ENST00000549400 IGKV2-30P06310 120 aa2.27□□□□□ -2.05
PTPRB-207ENST00000549400 PCOTHQ58A44 107 aa2.27□□□□□ -2.05
PTPRB-207ENST00000549400 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
PTPRB-207ENST00000549400 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
PTPRB-207ENST00000549400 DEFB116Q30KQ4 102 aa2.26□□□□□ -2.05
PTPRB-207ENST00000549400 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
PTPRB-207ENST00000549400 IGKV2-24A0A0C4DH68 120 aa2.25□□□□□ -2.05
PTPRB-207ENST00000549400 KRTAP11-1Q8IUC1 163 aa2.25□□□□□ -2.05
PTPRB-207ENST00000549400 SPACA4Q8TDM5 124 aa2.25□□□□□ -2.05
PTPRB-207ENST00000549400 Q96NJ1 140 aa2.25□□□□□ -2.05
PTPRB-207ENST00000549400 A0A1B0GU33 70 aa2.24□□□□□ -2.05
PTPRB-207ENST00000549400 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
PTPRB-207ENST00000549400 RPL37AP61513 92 aaKnown RBP2.24□□□□□ -2.05
PTPRB-207ENST00000549400 SSBP3-AS1Q7Z2R9 100 aa2.24□□□□□ -2.05
PTPRB-207ENST00000549400 HERC2O95714 4834 aa2.24□□□□□ -2.05
PTPRB-207ENST00000549400 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
PTPRB-207ENST00000549400 UBE2DNLQ8IWF7 75 aa2.23□□□□□ -2.05
PTPRB-207ENST00000549400 FAT3Q8TDW7 4589 aa2.22□□□□□ -2.05
PTPRB-207ENST00000549400 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
PTPRB-207ENST00000549400 DEFB105AQ8NG35 78 aa2.22□□□□□ -2.05
PTPRB-207ENST00000549400 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
PTPRB-207ENST00000549400 HSPG2P98160 4391 aa2.21□□□□□ -2.06
PTPRB-207ENST00000549400 LY6G6CO95867 125 aa2.21□□□□□ -2.06
PTPRB-207ENST00000549400 PRLHP81277 87 aa2.21□□□□□ -2.06
PTPRB-207ENST00000549400 Q6ZSA8 131 aa2.21□□□□□ -2.06
PTPRB-207ENST00000549400 ANAPC11Q9NYG5 84 aa2.21□□□□□ -2.06
PTPRB-207ENST00000549400 TNXBP22105 4242 aa2.19□□□□□ -2.06
PTPRB-207ENST00000549400 A0A0G2JQZ4 141 aa2.19□□□□□ -2.06
PTPRB-207ENST00000549400 MMP24-AS1A0A0U1RRL7 71 aa2.19□□□□□ -2.06
PTPRB-207ENST00000549400 PSORS1C2Q9UIG4 136 aa2.18□□□□□ -2.06
PTPRB-207ENST00000549400 MRPL34Q9BQ48 92 aaKnown RBP2.17□□□□□ -2.06
PTPRB-207ENST00000549400 CRIPTQ9P021 101 aa2.16□□□□□ -2.06
PTPRB-207ENST00000549400 ABCA13Q86UQ4 5058 aa2.14□□□□□ -2.07
PTPRB-207ENST00000549400 IGKV2D-30A0A075B6S6 120 aa2.14□□□□□ -2.07
PTPRB-207ENST00000549400 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
PTPRB-207ENST00000549400 HERC1Q15751 4861 aa2.13□□□□□ -2.07
PTPRB-207ENST00000549400 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
PTPRB-207ENST00000549400 TPRXLQ17RH7 258 aa2.13□□□□□ -2.07
PTPRB-207ENST00000549400 COX6B2Q6YFQ2 88 aa2.13□□□□□ -2.07
PTPRB-207ENST00000549400 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
PTPRB-207ENST00000549400 KRTAP1-4P0C5Y4 121 aa2.12□□□□□ -2.07
PTPRB-207ENST00000549400 KRTAP13-3Q3SY46 172 aa2.12□□□□□ -2.07
PTPRB-207ENST00000549400 H0YAA0 97 aa2.11□□□□□ -2.07
PTPRB-207ENST00000549400 MT3P25713 68 aa2.11□□□□□ -2.07
PTPRB-207ENST00000549400 KRTAP10-1P60331 282 aa2.11□□□□□ -2.07
PTPRB-207ENST00000549400 TYMSOSQ8TAI1 123 aa2.11□□□□□ -2.07
PTPRB-207ENST00000549400 A0A1B0GVY2 172 aa2.1□□□□□ -2.07
PTPRB-207ENST00000549400 RPS29P62273 56 aaKnown RBP2.1□□□□□ -2.07
PTPRB-207ENST00000549400 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
PTPRB-207ENST00000549400 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
PTPRB-207ENST00000549400 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
PTPRB-207ENST00000549400 KRTAP10-4P60372 401 aaPredicted RBP2.09□□□□□ -2.07
PTPRB-207ENST00000549400 R4GN34 69 aa2.08□□□□□ -2.08
PTPRB-207ENST00000549400 SPINK6Q6UWN8 80 aa2.07□□□□□ -2.08
PTPRB-207ENST00000549400 SPINK1P00995 79 aa2.06□□□□□ -2.08
PTPRB-207ENST00000549400 KRTAP10-5P60370 271 aa2.06□□□□□ -2.08
PTPRB-207ENST00000549400 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
PTPRB-207ENST00000549400 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
PTPRB-207ENST00000549400 INE1O15225 51 aa2.05□□□□□ -2.08
PTPRB-207ENST00000549400 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
PTPRB-207ENST00000549400 KRTAP10-8P60410 259 aa2.02□□□□□ -2.09
PTPRB-207ENST00000549400 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
PTPRB-207ENST00000549400 FLG2Q5D862 2391 aaPredicted RBP2.01□□□□□ -2.09
PTPRB-207ENST00000549400 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
PTPRB-207ENST00000549400 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
PTPRB-207ENST00000549400 LRP2P98164 4655 aa2□□□□□ -2.09
PTPRB-207ENST00000549400 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
PTPRB-207ENST00000549400 LPAP08519 4548 aa1.99□□□□□ -2.09
PTPRB-207ENST00000549400 DMBT1Q9UGM3 2413 aaPredicted RBP1.98□□□□□ -2.09
PTPRB-207ENST00000549400 FSIP2Q5CZC0 6907 aa1.98□□□□□ -2.09
PTPRB-207ENST00000549400 HMCN2Q8NDA2 5059 aa1.96□□□□□ -2.1
PTPRB-207ENST00000549400 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
PTPRB-207ENST00000549400 SMR3BP02814 79 aaPredicted RBP1.95□□□□□ -2.1
PTPRB-207ENST00000549400 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
PTPRB-207ENST00000549400 MT1HL1P0DM35 61 aa1.93□□□□□ -2.1
PTPRB-207ENST00000549400 Q5VSD8 79 aa1.93□□□□□ -2.1
PTPRB-207ENST00000549400 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
PTPRB-207ENST00000549400 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
PTPRB-207ENST00000549400 S4R3F8 94 aa1.91□□□□□ -2.1
PTPRB-207ENST00000549400 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
PTPRB-207ENST00000549400 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
PTPRB-207ENST00000549400 C9orf92A6NGG3 77 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms