RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 NOTCH1P46531 2555 aa2.46□□□□□ -2.02
USP25-210ENST00000549362 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
USP25-210ENST00000549362 SPINK1P00995 79 aa2.44□□□□□ -2.02
USP25-210ENST00000549362 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
USP25-210ENST00000549362 SPATA8Q6RVD6 105 aa2.44□□□□□ -2.02
USP25-210ENST00000549362 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
USP25-210ENST00000549362 HECTD4Q9Y4D8 3996 aa2.43□□□□□ -2.02
USP25-210ENST00000549362 STARD9Q9P2P6 4700 aa2.43□□□□□ -2.02
USP25-210ENST00000549362 DNAH6Q9C0G6 4158 aa2.43□□□□□ -2.02
USP25-210ENST00000549362 RPS29P62273 56 aaKnown RBP2.43□□□□□ -2.02
USP25-210ENST00000549362 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
USP25-210ENST00000549362 COL6A5A8TX70 2615 aa2.42□□□□□ -2.02
USP25-210ENST00000549362 LYSTQ99698 3801 aa2.42□□□□□ -2.02
USP25-210ENST00000549362 LY6G6CO95867 125 aa2.42□□□□□ -2.02
USP25-210ENST00000549362 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
USP25-210ENST00000549362 DNAH7Q8WXX0 4024 aa2.41□□□□□ -2.02
USP25-210ENST00000549362 STAB2Q8WWQ8 2551 aa2.41□□□□□ -2.02
USP25-210ENST00000549362 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
USP25-210ENST00000549362 Q6ZSA8 131 aa2.41□□□□□ -2.02
USP25-210ENST00000549362 RETNLBQ9BQ08 111 aa2.41□□□□□ -2.02
USP25-210ENST00000549362 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
USP25-210ENST00000549362 MGAM2Q2M2H8 2515 aa2.4□□□□□ -2.02
USP25-210ENST00000549362 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
USP25-210ENST00000549362 DNAH5Q8TE73 4624 aa2.4□□□□□ -2.03
USP25-210ENST00000549362 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
USP25-210ENST00000549362 K7ERS5 55 aa2.37□□□□□ -2.03
USP25-210ENST00000549362 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
USP25-210ENST00000549362 KRTAP10-8P60410 259 aa2.36□□□□□ -2.03
USP25-210ENST00000549362 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
USP25-210ENST00000549362 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
USP25-210ENST00000549362 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
USP25-210ENST00000549362 SACSQ9NZJ4 4579 aa2.35□□□□□ -2.03
USP25-210ENST00000549362 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
USP25-210ENST00000549362 A8MUU9 505 aa2.33□□□□□ -2.04
USP25-210ENST00000549362 C20orf166-AS1Q96NR2 134 aa2.33□□□□□ -2.04
USP25-210ENST00000549362 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
USP25-210ENST00000549362 A0A1B0GU33 70 aa2.32□□□□□ -2.04
USP25-210ENST00000549362 MEGF8Q7Z7M0 2845 aa2.32□□□□□ -2.04
USP25-210ENST00000549362 H1FX-AS1Q4G0G2 97 aa2.31□□□□□ -2.04
USP25-210ENST00000549362 TGP01266 2768 aa2.31□□□□□ -2.04
USP25-210ENST00000549362 CSAG1Q6PB30 78 aa2.3□□□□□ -2.04
USP25-210ENST00000549362 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
USP25-210ENST00000549362 COX6B2Q6YFQ2 88 aa2.29□□□□□ -2.04
USP25-210ENST00000549362 PKD1P98161 4303 aa2.28□□□□□ -2.04
USP25-210ENST00000549362 FBN3Q75N90 2809 aa2.28□□□□□ -2.04
USP25-210ENST00000549362 DNHD1Q96M86 4753 aa2.28□□□□□ -2.04
USP25-210ENST00000549362 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
USP25-210ENST00000549362 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.04
USP25-210ENST00000549362 DYNC1H1Q14204 4646 aaKnown RBP2.28□□□□□ -2.04
USP25-210ENST00000549362 C9orf92A6NGG3 77 aa2.27□□□□□ -2.05
USP25-210ENST00000549362 H0YAA0 97 aa2.27□□□□□ -2.05
USP25-210ENST00000549362 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
USP25-210ENST00000549362 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
USP25-210ENST00000549362 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
USP25-210ENST00000549362 HYDINQ4G0P3 5121 aa2.27□□□□□ -2.05
USP25-210ENST00000549362 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
USP25-210ENST00000549362 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
USP25-210ENST00000549362 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
USP25-210ENST00000549362 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
USP25-210ENST00000549362 KRTAP21-3Q3LHN1 58 aa2.25□□□□□ -2.05
USP25-210ENST00000549362 ROMO1P60602 79 aa2.24□□□□□ -2.05
USP25-210ENST00000549362 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
USP25-210ENST00000549362 PKHD1L1Q86WI1 4243 aa2.24□□□□□ -2.05
USP25-210ENST00000549362 SMR3BP02814 79 aaPredicted RBP2.22□□□□□ -2.05
USP25-210ENST00000549362 S4R3F8 94 aa2.22□□□□□ -2.05
USP25-210ENST00000549362 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
USP25-210ENST00000549362 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
USP25-210ENST00000549362 FAT1Q14517 4588 aa2.2□□□□□ -2.06
USP25-210ENST00000549362 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
USP25-210ENST00000549362 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
USP25-210ENST00000549362 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
USP25-210ENST00000549362 RYR2Q92736 4967 aa2.17□□□□□ -2.06
USP25-210ENST00000549362 TNXBP22105 4242 aa2.16□□□□□ -2.06
USP25-210ENST00000549362 HSPG2P98160 4391 aa2.16□□□□□ -2.06
USP25-210ENST00000549362 M0QZ58 72 aa2.15□□□□□ -2.07
USP25-210ENST00000549362 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
USP25-210ENST00000549362 A0A0D9SG42 100 aa2.14□□□□□ -2.07
USP25-210ENST00000549362 Q5VSD8 79 aa2.14□□□□□ -2.07
USP25-210ENST00000549362 FLG2Q5D862 2391 aaPredicted RBP2.14□□□□□ -2.07
USP25-210ENST00000549362 RYR1P21817 5038 aa2.13□□□□□ -2.07
USP25-210ENST00000549362 DMBT1Q9UGM3 2413 aaPredicted RBP2.11□□□□□ -2.07
USP25-210ENST00000549362 MYCBP2O75592 4640 aa2.11□□□□□ -2.07
USP25-210ENST00000549362 TPRXLQ17RH7 258 aa2.1□□□□□ -2.07
USP25-210ENST00000549362 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
USP25-210ENST00000549362 P0C880 135 aa2.09□□□□□ -2.07
USP25-210ENST00000549362 R4GN34 69 aa2.09□□□□□ -2.07
USP25-210ENST00000549362 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
USP25-210ENST00000549362 RYR3Q15413 4870 aa2.07□□□□□ -2.08
USP25-210ENST00000549362 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
USP25-210ENST00000549362 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
USP25-210ENST00000549362 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
USP25-210ENST00000549362 MT1HL1P0DM35 61 aa2.03□□□□□ -2.08
USP25-210ENST00000549362 PP632Q6XCG6 107 aa2.03□□□□□ -2.08
USP25-210ENST00000549362 LRP2P98164 4655 aa1.99□□□□□ -2.09
USP25-210ENST00000549362 KIAA1109Q2LD37 5005 aa1.99□□□□□ -2.09
USP25-210ENST00000549362 PLAC4Q8WY50 150 aa1.98□□□□□ -2.09
USP25-210ENST00000549362 HERC1Q15751 4861 aa1.98□□□□□ -2.09
USP25-210ENST00000549362 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
USP25-210ENST00000549362 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
USP25-210ENST00000549362 LPAP08519 4548 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms