RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
SFSWAP-211ENST00000542813 Q8IZM0 81 aa1.91□□□□□ -2.1
SFSWAP-211ENST00000542813 SORL1Q92673 2214 aa1.9□□□□□ -2.1
SFSWAP-211ENST00000542813 A0A087WSZ3 146 aa1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 MIR22HGQ0VDD5 57 aa1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 COX17Q14061 63 aa1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 CLPSL2Q6UWE3 100 aa1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 DYNC1H1Q14204 4646 aaKnown RBP1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 SRRM2Q9UQ35 2752 aaKnown RBP1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.11
SFSWAP-211ENST00000542813 LY6G6CO95867 125 aa1.89□□□□□ -2.11
SFSWAP-211ENST00000542813 HSPG2P98160 4391 aa1.89□□□□□ -2.11
SFSWAP-211ENST00000542813 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
SFSWAP-211ENST00000542813 DEFB136Q30KP8 78 aa1.88□□□□□ -2.11
SFSWAP-211ENST00000542813 UNQ6190/PRO20217Q6UXQ8 127 aa1.88□□□□□ -2.11
SFSWAP-211ENST00000542813 SPRR4Q96PI1 79 aa1.88□□□□□ -2.11
SFSWAP-211ENST00000542813 NOP10Q9NPE3 64 aaKnown RBP1.88□□□□□ -2.11
SFSWAP-211ENST00000542813 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
SFSWAP-211ENST00000542813 IGLV5-48A0A075B6I7 105 aa1.87□□□□□ -2.11
SFSWAP-211ENST00000542813 UQCR11O14957 56 aa1.87□□□□□ -2.11
SFSWAP-211ENST00000542813 FAT2Q9NYQ8 4349 aa1.87□□□□□ -2.11
SFSWAP-211ENST00000542813 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
SFSWAP-211ENST00000542813 K7EQZ3 153 aa1.86□□□□□ -2.11
SFSWAP-211ENST00000542813 C6orf48Q9UBA6 75 aa1.86□□□□□ -2.11
SFSWAP-211ENST00000542813 DNAH2Q9P225 4427 aa1.86□□□□□ -2.11
SFSWAP-211ENST00000542813 APOBP04114 4563 aaKnown RBP1.85□□□□□ -2.11
SFSWAP-211ENST00000542813 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
SFSWAP-211ENST00000542813 C1orf137Q5JT78 98 aa1.85□□□□□ -2.11
SFSWAP-211ENST00000542813 DMAC1Q96GE9 116 aa1.85□□□□□ -2.11
SFSWAP-211ENST00000542813 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
SFSWAP-211ENST00000542813 DNAH6Q9C0G6 4158 aa1.85□□□□□ -2.11
SFSWAP-211ENST00000542813 A0A096LPF7 62 aa1.84□□□□□ -2.11
SFSWAP-211ENST00000542813 GVQW2A0A096LPI5 108 aaPredicted RBP1.84□□□□□ -2.11
SFSWAP-211ENST00000542813 NUPR2A6NF83 97 aa1.84□□□□□ -2.11
SFSWAP-211ENST00000542813 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
SFSWAP-211ENST00000542813 VPS13DQ5THJ4 4388 aa1.84□□□□□ -2.12
SFSWAP-211ENST00000542813 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 Q6ZRN7 208 aaPredicted RBP1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 WFDC13Q8IUB5 93 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 DEFB105AQ8NG35 78 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 C4orf3Q8WVX3 66 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 TP53AIP1Q9HCN2 124 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 LRP1BQ9NZR2 4599 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
SFSWAP-211ENST00000542813 MUC2Q02817 5179 aa1.82□□□□□ -2.12
SFSWAP-211ENST00000542813 ANGP03950 147 aaKnown RBP1.82□□□□□ -2.12
SFSWAP-211ENST00000542813 RPL37AP61513 92 aaKnown RBP1.82□□□□□ -2.12
SFSWAP-211ENST00000542813 KRTAP26-1Q6PEX3 210 aa1.82□□□□□ -2.12
SFSWAP-211ENST00000542813 FAT4Q6V0I7 4981 aa1.81□□□□□ -2.12
SFSWAP-211ENST00000542813 A0A1B0GU69 56 aa1.81□□□□□ -2.12
SFSWAP-211ENST00000542813 DEFB130BP0DP73 79 aa1.81□□□□□ -2.12
SFSWAP-211ENST00000542813 DEFB130AP0DP74 79 aa1.81□□□□□ -2.12
SFSWAP-211ENST00000542813 PKD1P98161 4303 aa1.8□□□□□ -2.12
SFSWAP-211ENST00000542813 WFDC10BQ8IUB3 73 aa1.8□□□□□ -2.12
SFSWAP-211ENST00000542813 LINC00472Q9H8W2 130 aa1.8□□□□□ -2.12
SFSWAP-211ENST00000542813 ACYP2P14621 99 aa1.79□□□□□ -2.12
SFSWAP-211ENST00000542813 SPRR1AP35321 89 aa1.79□□□□□ -2.12
SFSWAP-211ENST00000542813 PCOTHQ58A44 107 aa1.79□□□□□ -2.12
SFSWAP-211ENST00000542813 PRO0255Q9UI72 69 aa1.79□□□□□ -2.12
SFSWAP-211ENST00000542813 FLG2Q5D862 2391 aaPredicted RBP1.79□□□□□ -2.12
SFSWAP-211ENST00000542813 MMP24-AS1A0A0U1RRL7 71 aa1.78□□□□□ -2.12
SFSWAP-211ENST00000542813 DEFB4AO15263 64 aa1.78□□□□□ -2.12
SFSWAP-211ENST00000542813 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
SFSWAP-211ENST00000542813 LELP1Q5T871 98 aa1.78□□□□□ -2.12
SFSWAP-211ENST00000542813 Q6ZRX8 168 aa1.78□□□□□ -2.12
SFSWAP-211ENST00000542813 FAT1Q14517 4588 aa1.78□□□□□ -2.12
SFSWAP-211ENST00000542813 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
SFSWAP-211ENST00000542813 A0A087WTM6 91 aa1.77□□□□□ -2.13
SFSWAP-211ENST00000542813 LRP2P98164 4655 aa1.75□□□□□ -2.13
SFSWAP-211ENST00000542813 Q5VSD8 79 aa1.75□□□□□ -2.13
SFSWAP-211ENST00000542813 HTN3P15516 51 aa1.74□□□□□ -2.13
SFSWAP-211ENST00000542813 Q96NJ1 140 aa1.74□□□□□ -2.13
SFSWAP-211ENST00000542813 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
SFSWAP-211ENST00000542813 PRLHP81277 87 aa1.73□□□□□ -2.13
SFSWAP-211ENST00000542813 DEFB135Q30KP9 77 aa1.73□□□□□ -2.13
SFSWAP-211ENST00000542813 SPRR1BP22528 89 aa1.72□□□□□ -2.13
SFSWAP-211ENST00000542813 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
SFSWAP-211ENST00000542813 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
SFSWAP-211ENST00000542813 PP632Q6XCG6 107 aa1.71□□□□□ -2.14
SFSWAP-211ENST00000542813 APLNQ9ULZ1 77 aa1.71□□□□□ -2.14
SFSWAP-211ENST00000542813 NBDYA0A0U1RRE5 68 aa1.7□□□□□ -2.14
SFSWAP-211ENST00000542813 SPART-AS1P0CW21 52 aa1.7□□□□□ -2.14
SFSWAP-211ENST00000542813 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
SFSWAP-211ENST00000542813 UBE2DNLQ8IWF7 75 aa1.7□□□□□ -2.14
SFSWAP-211ENST00000542813 MRPL34Q9BQ48 92 aaKnown RBP1.7□□□□□ -2.14
SFSWAP-211ENST00000542813 A0A096LNI7 61 aa1.69□□□□□ -2.14
SFSWAP-211ENST00000542813 INE1O15225 51 aa1.69□□□□□ -2.14
SFSWAP-211ENST00000542813 LINC01556Q5JQF7 62 aa1.69□□□□□ -2.14
SFSWAP-211ENST00000542813 SSBP3-AS1Q7Z2R9 100 aa1.69□□□□□ -2.14
SFSWAP-211ENST00000542813 LRP1Q07954 4544 aaKnown RBP1.69□□□□□ -2.14
SFSWAP-211ENST00000542813 H0YAA0 97 aa1.68□□□□□ -2.14
SFSWAP-211ENST00000542813 FAT3Q8TDW7 4589 aa1.68□□□□□ -2.14
SFSWAP-211ENST00000542813 H3BNG1 76 aa1.67□□□□□ -2.14
SFSWAP-211ENST00000542813 Q6ZSA8 131 aa1.67□□□□□ -2.14
SFSWAP-211ENST00000542813 KRTAP13-1Q8IUC0 172 aa1.67□□□□□ -2.14
SFSWAP-211ENST00000542813 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SFSWAP-211ENST00000542813 SMR3BP02814 79 aaPredicted RBP1.66□□□□□ -2.14
SFSWAP-211ENST00000542813 COX6B2Q6YFQ2 88 aa1.66□□□□□ -2.14
SFSWAP-211ENST00000542813 TNXBP22105 4242 aa1.65□□□□□ -2.15
SFSWAP-211ENST00000542813 H1FX-AS1Q4G0G2 97 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms