RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 ATRQ13535 2644 aa2.54□□□□□ -2
MDM2-226ENST00000540352 A0A096LNI7 61 aa2.54□□□□□ -2
MDM2-226ENST00000540352 HTN3P15516 51 aa2.54□□□□□ -2
MDM2-226ENST00000540352 TRRAPQ9Y4A5 3859 aa2.54□□□□□ -2
MDM2-226ENST00000540352 COL6A5A8TX70 2615 aa2.54□□□□□ -2
MDM2-226ENST00000540352 STAB1Q9NY15 2570 aa2.53□□□□□ -2
MDM2-226ENST00000540352 SPINK1P00995 79 aa2.53□□□□□ -2
MDM2-226ENST00000540352 DNAH3Q8TD57 4116 aa2.52□□□□□ -2.01
MDM2-226ENST00000540352 DEFB135Q30KP9 77 aa2.51□□□□□ -2.01
MDM2-226ENST00000540352 PLAC4Q8WY50 150 aa2.5□□□□□ -2.01
MDM2-226ENST00000540352 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
MDM2-226ENST00000540352 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
MDM2-226ENST00000540352 DEFB4AO15263 64 aa2.49□□□□□ -2.01
MDM2-226ENST00000540352 DNAH9Q9NYC9 4486 aa2.49□□□□□ -2.01
MDM2-226ENST00000540352 SPINK6Q6UWN8 80 aa2.48□□□□□ -2.01
MDM2-226ENST00000540352 NBEAL1Q6ZS30 2694 aa2.47□□□□□ -2.01
MDM2-226ENST00000540352 COL7A1Q02388 2944 aa2.45□□□□□ -2.02
MDM2-226ENST00000540352 HUWE1Q7Z6Z7 4374 aaKnown RBP2.44□□□□□ -2.02
MDM2-226ENST00000540352 FLG2Q5D862 2391 aaPredicted RBP2.44□□□□□ -2.02
MDM2-226ENST00000540352 NOTCH1P46531 2555 aa2.43□□□□□ -2.02
MDM2-226ENST00000540352 S4R3F8 94 aa2.43□□□□□ -2.02
MDM2-226ENST00000540352 PRKDCP78527 4128 aaKnown RBP2.43□□□□□ -2.02
MDM2-226ENST00000540352 MEGF8Q7Z7M0 2845 aa2.43□□□□□ -2.02
MDM2-226ENST00000540352 NBEAL2Q6ZNJ1 2754 aa2.43□□□□□ -2.02
MDM2-226ENST00000540352 Q6ZRN7 208 aaPredicted RBP2.42□□□□□ -2.02
MDM2-226ENST00000540352 KRTAP21-3Q3LHN1 58 aa2.42□□□□□ -2.02
MDM2-226ENST00000540352 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
MDM2-226ENST00000540352 MGAM2Q2M2H8 2515 aa2.41□□□□□ -2.02
MDM2-226ENST00000540352 TGP01266 2768 aa2.41□□□□□ -2.02
MDM2-226ENST00000540352 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
MDM2-226ENST00000540352 DYNC2H1Q8NCM8 4307 aaKnown RBP2.4□□□□□ -2.02
MDM2-226ENST00000540352 DNAH7Q8WXX0 4024 aa2.4□□□□□ -2.02
MDM2-226ENST00000540352 INE1O15225 51 aa2.4□□□□□ -2.03
MDM2-226ENST00000540352 APLNQ9ULZ1 77 aa2.4□□□□□ -2.03
MDM2-226ENST00000540352 UBE2DNLQ8IWF7 75 aa2.39□□□□□ -2.03
MDM2-226ENST00000540352 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
MDM2-226ENST00000540352 FBN3Q75N90 2809 aa2.37□□□□□ -2.03
MDM2-226ENST00000540352 A0A0D9SG42 100 aa2.37□□□□□ -2.03
MDM2-226ENST00000540352 VPS13DQ5THJ4 4388 aa2.37□□□□□ -2.03
MDM2-226ENST00000540352 TENM3Q9P273 2699 aa2.37□□□□□ -2.03
MDM2-226ENST00000540352 SACSQ9NZJ4 4579 aa2.36□□□□□ -2.03
MDM2-226ENST00000540352 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
MDM2-226ENST00000540352 R4GN34 69 aa2.36□□□□□ -2.03
MDM2-226ENST00000540352 DNAH1Q9P2D7 4330 aa2.36□□□□□ -2.03
MDM2-226ENST00000540352 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
MDM2-226ENST00000540352 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
MDM2-226ENST00000540352 KRTAP12-1P59990 96 aa2.34□□□□□ -2.04
MDM2-226ENST00000540352 PP632Q6XCG6 107 aa2.34□□□□□ -2.04
MDM2-226ENST00000540352 DNAH2Q9P225 4427 aa2.33□□□□□ -2.04
MDM2-226ENST00000540352 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
MDM2-226ENST00000540352 LYSTQ99698 3801 aa2.32□□□□□ -2.04
MDM2-226ENST00000540352 DNAH10Q8IVF4 4471 aa2.31□□□□□ -2.04
MDM2-226ENST00000540352 DNAH17Q9UFH2 4485 aa2.31□□□□□ -2.04
MDM2-226ENST00000540352 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
MDM2-226ENST00000540352 DNAH6Q9C0G6 4158 aa2.3□□□□□ -2.04
MDM2-226ENST00000540352 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
MDM2-226ENST00000540352 M0QZ58 72 aa2.29□□□□□ -2.04
MDM2-226ENST00000540352 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
MDM2-226ENST00000540352 KMT2CQ8NEZ4 4911 aaKnown RBP2.28□□□□□ -2.04
MDM2-226ENST00000540352 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
MDM2-226ENST00000540352 RYR3Q15413 4870 aa2.28□□□□□ -2.04
MDM2-226ENST00000540352 RPS29P62273 56 aaKnown RBP2.27□□□□□ -2.05
MDM2-226ENST00000540352 FRAS1Q86XX4 4008 aa2.27□□□□□ -2.05
MDM2-226ENST00000540352 KMT2AQ03164 3969 aa2.26□□□□□ -2.05
MDM2-226ENST00000540352 RYR2Q92736 4967 aa2.26□□□□□ -2.05
MDM2-226ENST00000540352 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
MDM2-226ENST00000540352 PKD1P98161 4303 aa2.25□□□□□ -2.05
MDM2-226ENST00000540352 KRTAP13-2Q52LG2 175 aa2.24□□□□□ -2.05
MDM2-226ENST00000540352 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
MDM2-226ENST00000540352 HECTD4Q9Y4D8 3996 aa2.24□□□□□ -2.05
MDM2-226ENST00000540352 DNAH5Q8TE73 4624 aa2.23□□□□□ -2.05
MDM2-226ENST00000540352 DYNC1H1Q14204 4646 aaKnown RBP2.23□□□□□ -2.05
MDM2-226ENST00000540352 SRRM2Q9UQ35 2752 aaKnown RBP2.23□□□□□ -2.05
MDM2-226ENST00000540352 DNAH8Q96JB1 4490 aa2.22□□□□□ -2.05
MDM2-226ENST00000540352 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
MDM2-226ENST00000540352 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
MDM2-226ENST00000540352 EPPK1P58107 5090 aaKnown RBP2.18□□□□□ -2.06
MDM2-226ENST00000540352 LRP1BQ9NZR2 4599 aa2.17□□□□□ -2.06
MDM2-226ENST00000540352 Q5VSD8 79 aa2.17□□□□□ -2.06
MDM2-226ENST00000540352 PKHD1P08F94 4074 aa2.17□□□□□ -2.06
MDM2-226ENST00000540352 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
MDM2-226ENST00000540352 FAT1Q14517 4588 aa2.14□□□□□ -2.07
MDM2-226ENST00000540352 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
MDM2-226ENST00000540352 RYR1P21817 5038 aa2.11□□□□□ -2.07
MDM2-226ENST00000540352 HSPG2P98160 4391 aa2.11□□□□□ -2.07
MDM2-226ENST00000540352 KRTAP10-1P60331 282 aa2.11□□□□□ -2.07
MDM2-226ENST00000540352 C9orf92A6NGG3 77 aa2.1□□□□□ -2.07
MDM2-226ENST00000540352 VPS13BQ7Z7G8 4022 aa2.09□□□□□ -2.07
MDM2-226ENST00000540352 PKHD1L1Q86WI1 4243 aa2.09□□□□□ -2.07
MDM2-226ENST00000540352 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
MDM2-226ENST00000540352 DMBT1Q9UGM3 2413 aaPredicted RBP2.08□□□□□ -2.08
MDM2-226ENST00000540352 HERC2O95714 4834 aa2.08□□□□□ -2.08
MDM2-226ENST00000540352 FAT3Q8TDW7 4589 aa2.07□□□□□ -2.08
MDM2-226ENST00000540352 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
MDM2-226ENST00000540352 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
MDM2-226ENST00000540352 TNP1P09430 55 aa2.04□□□□□ -2.08
MDM2-226ENST00000540352 KRTAP10-10P60014 251 aa2.04□□□□□ -2.08
MDM2-226ENST00000540352 ABCA13Q86UQ4 5058 aa2.04□□□□□ -2.08
MDM2-226ENST00000540352 LRP1Q07954 4544 aaKnown RBP2.03□□□□□ -2.08
MDM2-226ENST00000540352 MYCBP2O75592 4640 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms