RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 A0A1W2PNM2 257 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 H0Y9P7 68 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 UQCR11O14957 56 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 HAMPP81172 84 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 KRTAP25-1Q3LHN0 102 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 C1orf137Q5JT78 98 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 Q9BRP9 147 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 HIGD2AQ9BW72 106 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 KLK12Q9UKR0 248 aa1.06□□□□□ -2.24
CBX3P4-201ENST00000538909 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 LPAP08519 4548 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 A0A1B0GU33 70 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 FAM168BA1KXE4 195 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 JMJD7-PLA2G4BH0Y9G9 81 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 COX6A2Q02221 97 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 C9orf163Q8N9P6 203 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 SPANXA2-OT1Q8N9U9 137 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 DEFB104AQ8WTQ1 72 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 ZNF625Q96I27 306 aaPredicted RBP1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 LINC01558Q9Y6Z2 57 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
CBX3P4-201ENST00000538909 M0R2N4 97 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 ANGP03950 147 aaKnown RBP1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 SPINK7P58062 85 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 CLPSL2Q6UWE3 100 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 UBE2DNLQ8IWF7 75 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 Q8IZM0 81 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 ST20-AS1Q8NBB2 130 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 SPACA4Q8TDM5 124 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 C6orf48Q9UBA6 75 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 CDKN2A-AS1Q9UH64 79 aa1.04□□□□□ -2.24
CBX3P4-201ENST00000538909 IGKV2D-24A0A075B6R9 120 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 A0A096LNI7 61 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 IGKV3OR2-268A0A0C4DH90 116 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 RPL37AP61513 92 aaKnown RBP1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 Q5W150 140 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 KRTAP13-1Q8IUC0 172 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 OBSCN-AS1Q96MR7 158 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 PLAC8Q9NZF1 115 aa1.03□□□□□ -2.24
CBX3P4-201ENST00000538909 A0A1B0GU69 56 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 A0A1W2PNN7 141 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 H0YGX0 51 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 NCR3O14931 201 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 NDUFA1O15239 70 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 ACYP2P14621 99 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 PDE6GP18545 87 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 SPRR1AP35321 89 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 COX17Q14061 63 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 COA5Q86WW8 74 aa1.02□□□□□ -2.25
CBX3P4-201ENST00000538909 MUC2Q02817 5179 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 IGKV2-28A0A075B6P5 120 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 ZNF861PO60384 105 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 IGKV2D-28P01615 120 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 MT1HL1P0DM35 61 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 Q5VSD8 79 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 SPATA8Q6RVD6 105 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 R4GN34 69 aa1.01□□□□□ -2.25
CBX3P4-201ENST00000538909 ETDCA0A1B0GVM5 59 aa1□□□□□ -2.25
CBX3P4-201ENST00000538909 IGKV4-1P06312 121 aa1□□□□□ -2.25
CBX3P4-201ENST00000538909 COX7BP24311 80 aa1□□□□□ -2.25
CBX3P4-201ENST00000538909 LINC00304Q8N9R0 145 aa1□□□□□ -2.25
CBX3P4-201ENST00000538909 ZCCHC13Q8WW36 166 aaKnown RBP1□□□□□ -2.25
CBX3P4-201ENST00000538909 SPRR4Q96PI1 79 aa1□□□□□ -2.25
CBX3P4-201ENST00000538909 KCNQ1DNQ9H478 68 aa1□□□□□ -2.25
CBX3P4-201ENST00000538909 FLGP20930 4061 aaPredicted RBP0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 LOC110117498A0A087WWA1 95 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 A0A0G2JQZ4 141 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 IGLV6-57P01721 117 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 Q6ZQY7 126 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 SSBP3-AS1Q7Z2R9 100 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 PSORS1C2Q9UIG4 136 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 FAT4Q6V0I7 4981 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 RNF213Q63HN8 5207 aa0.99□□□□□ -2.25
CBX3P4-201ENST00000538909 IGKV2-24A0A0C4DH68 120 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 HRES1P13985 223 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 SPRR1BP22528 89 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 KRTAP13-2Q52LG2 175 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 SPINK6Q6UWN8 80 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 Q8N9L7 120 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 LINC00308Q8TCZ7 52 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 Q96NJ1 140 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 TOMM7Q9P0U1 55 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 PRO2289Q9P1D8 64 aa0.98□□□□□ -2.25
CBX3P4-201ENST00000538909 IGLV5-48A0A075B6I7 105 aa0.97□□□□□ -2.25
CBX3P4-201ENST00000538909 SMR3BP02814 79 aaPredicted RBP0.97□□□□□ -2.25
CBX3P4-201ENST00000538909 Q6ZRX8 168 aa0.97□□□□□ -2.25
CBX3P4-201ENST00000538909 LINC00472Q9H8W2 130 aa0.97□□□□□ -2.25
CBX3P4-201ENST00000538909 LINC00158P58513 81 aa0.96□□□□□ -2.26
CBX3P4-201ENST00000538909 KRTAP12-4P60329 112 aa0.96□□□□□ -2.26
CBX3P4-201ENST00000538909 TPRXLQ17RH7 258 aa0.96□□□□□ -2.26
CBX3P4-201ENST00000538909 SMIM11BQ8TCY0 68 aa0.96□□□□□ -2.26
CBX3P4-201ENST00000538909 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
CBX3P4-201ENST00000538909 PRLHP81277 87 aa0.95□□□□□ -2.26
CBX3P4-201ENST00000538909 SPRR5A0A1B0GTR4 108 aa0.94□□□□□ -2.26
CBX3P4-201ENST00000538909 LINC00575Q6W349 94 aa0.94□□□□□ -2.26
CBX3P4-201ENST00000538909 KRTAP19-2Q3LHN2 52 aa0.93□□□□□ -2.26
CBX3P4-201ENST00000538909 CRIPTQ9P021 101 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms