RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
SPG11-203ENST00000535302 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
SPG11-203ENST00000535302 AKAP9Q99996 3911 aa5.38□□□□□ -1.55
SPG11-203ENST00000535302 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
SPG11-203ENST00000535302 DNAH9Q9NYC9 4486 aa5.32□□□□□ -1.56
SPG11-203ENST00000535302 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
SPG11-203ENST00000535302 DNAH1Q9P2D7 4330 aa5.25□□□□□ -1.57
SPG11-203ENST00000535302 DNAH5Q8TE73 4624 aa5.22□□□□□ -1.57
SPG11-203ENST00000535302 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
SPG11-203ENST00000535302 DNAH10Q8IVF4 4471 aa5.15□□□□□ -1.58
SPG11-203ENST00000535302 PLECQ15149 4684 aaKnown RBP5.14□□□□□ -1.59
SPG11-203ENST00000535302 MT1HP80294 61 aa5.1□□□□□ -1.59
SPG11-203ENST00000535302 DNAH11Q96DT5 4516 aa5.07□□□□□ -1.6
SPG11-203ENST00000535302 DNAH2Q9P225 4427 aa5.06□□□□□ -1.6
SPG11-203ENST00000535302 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
SPG11-203ENST00000535302 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
SPG11-203ENST00000535302 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
SPG11-203ENST00000535302 MT2AP02795 61 aa4.98□□□□□ -1.61
SPG11-203ENST00000535302 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
SPG11-203ENST00000535302 DNAH3Q8TD57 4116 aa4.96□□□□□ -1.62
SPG11-203ENST00000535302 ANK2Q01484 3957 aa4.95□□□□□ -1.62
SPG11-203ENST00000535302 VPS13DQ5THJ4 4388 aa4.94□□□□□ -1.62
SPG11-203ENST00000535302 STARD9Q9P2P6 4700 aa4.94□□□□□ -1.62
SPG11-203ENST00000535302 LRP1BQ9NZR2 4599 aa4.94□□□□□ -1.62
SPG11-203ENST00000535302 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
SPG11-203ENST00000535302 MT1FP04733 61 aa4.92□□□□□ -1.62
SPG11-203ENST00000535302 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
SPG11-203ENST00000535302 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
SPG11-203ENST00000535302 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
SPG11-203ENST00000535302 FAT2Q9NYQ8 4349 aa4.91□□□□□ -1.62
SPG11-203ENST00000535302 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
SPG11-203ENST00000535302 FAT1Q14517 4588 aa4.89□□□□□ -1.63
SPG11-203ENST00000535302 KMT2AQ03164 3969 aa4.85□□□□□ -1.63
SPG11-203ENST00000535302 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
SPG11-203ENST00000535302 VPS13BQ7Z7G8 4022 aa4.83□□□□□ -1.64
SPG11-203ENST00000535302 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
SPG11-203ENST00000535302 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
SPG11-203ENST00000535302 RYR1P21817 5038 aa4.8□□□□□ -1.64
SPG11-203ENST00000535302 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
SPG11-203ENST00000535302 SPRR2EP22531 72 aa4.74□□□□□ -1.65
SPG11-203ENST00000535302 SPRR2BP35325 72 aa4.74□□□□□ -1.65
SPG11-203ENST00000535302 SPRR2AP35326 72 aa4.74□□□□□ -1.65
SPG11-203ENST00000535302 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
SPG11-203ENST00000535302 PRKDCP78527 4128 aaKnown RBP4.74□□□□□ -1.65
SPG11-203ENST00000535302 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
SPG11-203ENST00000535302 LYSTQ99698 3801 aa4.73□□□□□ -1.65
SPG11-203ENST00000535302 KRTAP17-1Q9BYP8 105 aa4.69□□□□□ -1.66
SPG11-203ENST00000535302 CMYA5Q8N3K9 4069 aa4.69□□□□□ -1.66
SPG11-203ENST00000535302 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.67
SPG11-203ENST00000535302 MT1GP13640 62 aa4.61□□□□□ -1.67
SPG11-203ENST00000535302 RYR3Q15413 4870 aa4.59□□□□□ -1.67
SPG11-203ENST00000535302 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
SPG11-203ENST00000535302 SPRR2DP22532 72 aa4.55□□□□□ -1.68
SPG11-203ENST00000535302 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
SPG11-203ENST00000535302 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
SPG11-203ENST00000535302 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
SPG11-203ENST00000535302 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
SPG11-203ENST00000535302 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
SPG11-203ENST00000535302 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
SPG11-203ENST00000535302 HECTD4Q9Y4D8 3996 aa4.47□□□□□ -1.69
SPG11-203ENST00000535302 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
SPG11-203ENST00000535302 MT1XP80297 61 aa4.47□□□□□ -1.69
SPG11-203ENST00000535302 LCE2BO14633 110 aa4.46□□□□□ -1.7
SPG11-203ENST00000535302 LPAP08519 4548 aa4.42□□□□□ -1.7
SPG11-203ENST00000535302 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.7
SPG11-203ENST00000535302 MT1BP07438 61 aa4.39□□□□□ -1.71
SPG11-203ENST00000535302 HSPG2P98160 4391 aa4.36□□□□□ -1.71
SPG11-203ENST00000535302 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
SPG11-203ENST00000535302 HYDINQ4G0P3 5121 aa4.31□□□□□ -1.72
SPG11-203ENST00000535302 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
SPG11-203ENST00000535302 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
SPG11-203ENST00000535302 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
SPG11-203ENST00000535302 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
SPG11-203ENST00000535302 MT4P47944 62 aa4.25□□□□□ -1.73
SPG11-203ENST00000535302 RYR2Q92736 4967 aa4.25□□□□□ -1.73
SPG11-203ENST00000535302 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
SPG11-203ENST00000535302 PKD1P98161 4303 aa4.22□□□□□ -1.73
SPG11-203ENST00000535302 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
SPG11-203ENST00000535302 PKHD1P08F94 4074 aa4.2□□□□□ -1.74
SPG11-203ENST00000535302 LCE2DQ5TA82 110 aaPredicted RBP4.2□□□□□ -1.74
SPG11-203ENST00000535302 LRP2P98164 4655 aa4.19□□□□□ -1.74
SPG11-203ENST00000535302 HERC1Q15751 4861 aa4.16□□□□□ -1.74
SPG11-203ENST00000535302 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
SPG11-203ENST00000535302 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
SPG11-203ENST00000535302 HERC2O95714 4834 aa4.14□□□□□ -1.75
SPG11-203ENST00000535302 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
SPG11-203ENST00000535302 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
SPG11-203ENST00000535302 TNXBP22105 4242 aa4.11□□□□□ -1.75
SPG11-203ENST00000535302 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
SPG11-203ENST00000535302 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
SPG11-203ENST00000535302 PRM1P04553 51 aa4.06□□□□□ -1.76
SPG11-203ENST00000535302 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
SPG11-203ENST00000535302 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
SPG11-203ENST00000535302 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
SPG11-203ENST00000535302 MT1LQ93083 61 aa4.04□□□□□ -1.76
SPG11-203ENST00000535302 KMT2CQ8NEZ4 4911 aaKnown RBP4.03□□□□□ -1.77
SPG11-203ENST00000535302 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
SPG11-203ENST00000535302 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
SPG11-203ENST00000535302 MT1EP04732 61 aa4□□□□□ -1.77
SPG11-203ENST00000535302 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms