RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	KRTAP2-3	P0C7H8	128 aa		0.91	□□□□□ -2.26
LMO7-223	ENST00000533299		Q8N8P6	123 aa		0.91	□□□□□ -2.26
LMO7-223	ENST00000533299	BRK1	Q8WUW1	75 aa		0.91	□□□□□ -2.26
LMO7-223	ENST00000533299	KRTAP2-4	Q9BYR9	128 aa		0.91	□□□□□ -2.26
LMO7-223	ENST00000533299	MRPL35	Q9NZE8	188 aa	Known RBP	0.91	□□□□□ -2.26
LMO7-223	ENST00000533299	TOMM7	Q9P0U1	55 aa		0.91	□□□□□ -2.26
LMO7-223	ENST00000533299	SNURF	Q9Y675	71 aa		0.91	□□□□□ -2.26
LMO7-223	ENST00000533299		A0A087WVE0	104 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299		A0A1B0GUT8	65 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	LINC01546	A6NGU7	62 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	DPM2	O94777	84 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	ROMO1	P60602	79 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	TMEM170B	Q5T4T1	132 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	CLEC2B	Q92478	149 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	TMEM167B	Q9NRX6	74 aa		0.9	□□□□□ -2.27
LMO7-223	ENST00000533299	ZNF815P	A8K554	130 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299		I3L3M4	83 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	ATOX1	O00244	68 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	RPL39	P62891	51 aa	Known RBP	0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	SPAG11A	Q6PDA7	123 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	SERP2	Q8N6R1	65 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	SPRR4	Q96PI1	79 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	SPANXC	Q9NY87	97 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	PRO1854	Q9UHT4	67 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	NDUFA12	Q9UI09	145 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	SERP1	Q9Y6X1	66 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	TRBV30	A0A0K0K1B3	111 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299		F8VRH5	84 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299		H7BZZ5	65 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	SPINK1	P00995	79 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	BAALC-AS2	P0C853	105 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	CKS2	P33552	79 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	NPC2	P61916	151 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	ATXN8	Q156A1	80 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	LINC00643	Q86TS7	51 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	AMELX	Q99217	191 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	LINC00846	Q9NV44	126 aa		0.89	□□□□□ -2.27
LMO7-223	ENST00000533299	TRAV12-1	A0A0B4J245	112 aa		0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	TRBV7-6	A0A0J9YX20	115 aa		0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	RBM3	P98179	157 aa	Known RBP	0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	S100A7L2	Q5SY68	101 aa		0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	PRR15	Q8IV56	129 aa		0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	MUSTN1	Q8IVN3	82 aa		0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	C20orf197	Q8N268	126 aa		0.88	□□□□□ -2.27
LMO7-223	ENST00000533299	DST	Q03001	7570 aa	Known RBP	0.87	□□□□□ -2.27
LMO7-223	ENST00000533299		F8WEM9	126 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	CCK	P06307	115 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	ACYP1	P07311	99 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	PLN	P26678	52 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	RPL37	P61927	97 aa	Known RBP	0.87	□□□□□ -2.27
LMO7-223	ENST00000533299		Q6JHZ5	121 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	SPANXD	Q9BXN6	97 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	KRTAP2-1	Q9BYU5	128 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	C14orf132	Q9NPU4	83 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	IGIP	A6NJ69	53 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	ERC2-IT1	O76042	136 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	SPRR2E	P22531	72 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	SPRR2B	P35325	72 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	SPRR2A	P35326	72 aa		0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	POLR2K	P53803	58 aa	Known RBP	0.87	□□□□□ -2.27
LMO7-223	ENST00000533299	TRAV23DV6	A0A075B6W5	121 aa		0.86	□□□□□ -2.27
LMO7-223	ENST00000533299	KLKP1	Q107X0	134 aa		0.86	□□□□□ -2.27
LMO7-223	ENST00000533299	TMEM254	Q8TBM7	123 aa		0.86	□□□□□ -2.27
LMO7-223	ENST00000533299	SMIM2	Q9BVW6	85 aa		0.86	□□□□□ -2.27
LMO7-223	ENST00000533299	CNFN	Q9BYD5	112 aa		0.86	□□□□□ -2.27
LMO7-223	ENST00000533299	TRAV13-2	A0A0B4J235	113 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	TRBV27	A0A0K0K1C4	114 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299		A6NN06	94 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	DNAL4	O96015	105 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	COX6C	P09669	75 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	MRPS36	P82909	103 aa	Known RBP	0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	CDC42SE1	Q9NRR8	79 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	CDKN2A-AS1	Q9UH64	79 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	TRBV7-4	A0A0J9YYF1	115 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	NCR3	O14931	201 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	SSBP3-AS1	Q7Z2R9	100 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	OBSCN-AS1	Q96MR7	158 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	SPRR2F	Q96RM1	72 aa		0.85	□□□□□ -2.27
LMO7-223	ENST00000533299	TRAV22	A0A0B4J277	110 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	hDV103S1	A0JD37	113 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	ATP5E	P56381	51 aa	Predicted RBP	0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	RPS29	P62273	56 aa	Known RBP	0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	ATP11AUN	Q6ZP68	121 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299		Q8IZM0	81 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	COX7B2	Q8TF08	81 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	COPS9	Q8WXC6	57 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	TMEM141	Q96I45	108 aa		0.84	□□□□□ -2.28
LMO7-223	ENST00000533299	ETDC	A0A1B0GVM5	59 aa		0.83	□□□□□ -2.28
LMO7-223	ENST00000533299	SPRR2D	P22532	72 aa		0.83	□□□□□ -2.28
LMO7-223	ENST00000533299		Q5VV11	94 aa		0.83	□□□□□ -2.28
LMO7-223	ENST00000533299	LINC00308	Q8TCZ7	52 aa		0.83	□□□□□ -2.28
LMO7-223	ENST00000533299	LAMTOR3	Q9UHA4	124 aa		0.83	□□□□□ -2.28
LMO7-223	ENST00000533299	TRBV10-3	A0A0K0K1G6	114 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	NREP	Q16612	68 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	ATP5EP2	Q5VTU8	51 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	SPTSSB	Q8NFR3	76 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	HCG22	E2RYF7	251 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	NDUFC1	O43677	76 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	DEFB105A	Q8NG35	78 aa		0.82	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms