RNA–Protein interactions for RNA: ENST00000531556.1

AP004247.1-201, humanhuman

BASIC

Gene AP004247.1, Length 1,289 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.1-201ENST00000531556 HECTD1Q9ULT8 2610 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 CHD8Q9HCK8 2581 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 LRRK2Q5S007 2527 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 TLN2Q9Y4G6 2542 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 DEFB131BA0A096LNP1 70 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 LINC01556Q5JQF7 62 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 SPATA8Q6RVD6 105 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 STAB1Q9NY15 2570 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 DNAH3Q8TD57 4116 aa0.7□□□□□ -2.3
AP004247.1-201ENST00000531556 FLNAP21333 2647 aaKnown RBP0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 VPS13DQ5THJ4 4388 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 HUWE1Q7Z6Z7 4374 aaKnown RBP0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 DNAH17Q9UFH2 4485 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 PIEZO1Q92508 2521 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 MEGF8Q7Z7M0 2845 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 A0A1B0GU69 56 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 SPRR1BP22528 89 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 MIR22HGQ0VDD5 57 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 C1orf134Q5TEV5 83 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 DMAC1Q96GE9 116 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 MRPL34Q9BQ48 92 aaKnown RBP0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 USP9YO00507 2555 aaPredicted RBP0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 ZFYVE26Q68DK2 2539 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 CCDC168Q8NDH2 2452 aa0.69□□□□□ -2.3
AP004247.1-201ENST00000531556 ABCA12Q86UK0 2595 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 ZNF462Q96JM2 2506 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 H0YAA0 97 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 H3BNG1 76 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 SPINK1P00995 79 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 ACYP2P14621 99 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 TTC28Q96AY4 2481 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 TP53AIP1Q9HCN2 124 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 HECTD4Q9Y4D8 3996 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 SONP18583 2426 aaKnown RBP0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 TGP01266 2768 aa0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 TEP1Q99973 2627 aaKnown RBP0.68□□□□□ -2.3
AP004247.1-201ENST00000531556 DOPEY1Q5JWR5 2465 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 RIF1Q5UIP0 2472 aaKnown RBP0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 PRKDCP78527 4128 aaKnown RBP0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 NBEAL1Q6ZS30 2694 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 DNAH6Q9C0G6 4158 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 MAST4O15021 2626 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 UQCR11O14957 56 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 ROMO1P60602 79 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 ITPR2Q14571 2701 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 MYO9AB2RTY4 2548 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 F8P00451 2351 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 DNAH2Q9P225 4427 aa0.67□□□□□ -2.3
AP004247.1-201ENST00000531556 DYNC2H1Q8NCM8 4307 aaKnown RBP0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 ACANP16112 2415 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 PKHD1P08F94 4074 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 UBE2DNLQ8IWF7 75 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 APLNQ9ULZ1 77 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 NSD1Q96L73 2696 aaPredicted RBP0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 FAT2Q9NYQ8 4349 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 CREBBPQ92793 2442 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 MTORP42345 2549 aa0.66□□□□□ -2.3
AP004247.1-201ENST00000531556 PKD1P98161 4303 aa0.65□□□□□ -2.3
AP004247.1-201ENST00000531556 MYO18BQ8IUG5 2567 aa0.65□□□□□ -2.3
AP004247.1-201ENST00000531556 A0A087WTM6 91 aa0.65□□□□□ -2.31
AP004247.1-201ENST00000531556 A0A0D9SG42 100 aa0.65□□□□□ -2.31
AP004247.1-201ENST00000531556 SSBP3-AS1Q7Z2R9 100 aa0.65□□□□□ -2.31
AP004247.1-201ENST00000531556 STARD9Q9P2P6 4700 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 KIAA1109Q2LD37 5005 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 ACACBO00763 2458 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 PLECQ15149 4684 aaKnown RBP0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 MUC2Q02817 5179 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 NBDYA0A0U1RRE5 68 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 C9orf92A6NGG3 77 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 LY6G6CO95867 125 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 H1FX-AS1Q4G0G2 97 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 VPS13BQ7Z7G8 4022 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 ATRQ13535 2644 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 FAM208BQ5VWN6 2430 aa0.64□□□□□ -2.31
AP004247.1-201ENST00000531556 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
AP004247.1-201ENST00000531556 INE1O15225 51 aa0.63□□□□□ -2.31
AP004247.1-201ENST00000531556 COX6B2Q6YFQ2 88 aa0.63□□□□□ -2.31
AP004247.1-201ENST00000531556 DNAH11Q96DT5 4516 aa0.63□□□□□ -2.31
AP004247.1-201ENST00000531556 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
AP004247.1-201ENST00000531556 DNAH5Q8TE73 4624 aa0.62□□□□□ -2.31
AP004247.1-201ENST00000531556 COL6A5A8TX70 2615 aa0.62□□□□□ -2.31
AP004247.1-201ENST00000531556 NUPR2A6NF83 97 aa0.62□□□□□ -2.31
AP004247.1-201ENST00000531556 LRP1BQ9NZR2 4599 aa0.62□□□□□ -2.31
AP004247.1-201ENST00000531556 LPAP08519 4548 aa0.61□□□□□ -2.31
AP004247.1-201ENST00000531556 PKHD1L1Q86WI1 4243 aa0.61□□□□□ -2.31
AP004247.1-201ENST00000531556 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
AP004247.1-201ENST00000531556 SMR3BP02814 79 aaPredicted RBP0.61□□□□□ -2.31
AP004247.1-201ENST00000531556 S4R3F8 94 aa0.61□□□□□ -2.31
AP004247.1-201ENST00000531556 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
AP004247.1-201ENST00000531556 TNXBP22105 4242 aa0.6□□□□□ -2.31
AP004247.1-201ENST00000531556 RPL37P61927 97 aaKnown RBP0.6□□□□□ -2.31
AP004247.1-201ENST00000531556 HSPG2P98160 4391 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms