RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 ITPR2Q14571 2701 aa2.57□□□□□ -2
GMDS-207ENST00000530459 FLG2Q5D862 2391 aaPredicted RBP2.57□□□□□ -2
GMDS-207ENST00000530459 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
GMDS-207ENST00000530459 CMYA5Q8N3K9 4069 aa2.56□□□□□ -2
GMDS-207ENST00000530459 KRTAP10-1P60331 282 aa2.55□□□□□ -2
GMDS-207ENST00000530459 KRTAP9-3Q9BYQ3 159 aa2.55□□□□□ -2
GMDS-207ENST00000530459 KRTAP12-1P59990 96 aa2.54□□□□□ -2
GMDS-207ENST00000530459 FRAS1Q86XX4 4008 aa2.53□□□□□ -2
GMDS-207ENST00000530459 A0A0D9SG42 100 aa2.53□□□□□ -2
GMDS-207ENST00000530459 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
GMDS-207ENST00000530459 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2.01
GMDS-207ENST00000530459 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
GMDS-207ENST00000530459 C9orf92A6NGG3 77 aa2.52□□□□□ -2.01
GMDS-207ENST00000530459 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
GMDS-207ENST00000530459 TGP01266 2768 aa2.52□□□□□ -2.01
GMDS-207ENST00000530459 M0QZ58 72 aa2.51□□□□□ -2.01
GMDS-207ENST00000530459 DNAH7Q8WXX0 4024 aa2.51□□□□□ -2.01
GMDS-207ENST00000530459 STAB2Q8WWQ8 2551 aa2.51□□□□□ -2.01
GMDS-207ENST00000530459 HECTD4Q9Y4D8 3996 aa2.5□□□□□ -2.01
GMDS-207ENST00000530459 CSMD3Q7Z407 3707 aa2.5□□□□□ -2.01
GMDS-207ENST00000530459 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
GMDS-207ENST00000530459 NBEAL1Q6ZS30 2694 aa2.49□□□□□ -2.01
GMDS-207ENST00000530459 NOTCH1P46531 2555 aa2.49□□□□□ -2.01
GMDS-207ENST00000530459 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
GMDS-207ENST00000530459 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
GMDS-207ENST00000530459 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
GMDS-207ENST00000530459 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
GMDS-207ENST00000530459 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
GMDS-207ENST00000530459 STAB1Q9NY15 2570 aa2.46□□□□□ -2.02
GMDS-207ENST00000530459 COL6A5A8TX70 2615 aa2.45□□□□□ -2.02
GMDS-207ENST00000530459 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
GMDS-207ENST00000530459 DNAH6Q9C0G6 4158 aa2.45□□□□□ -2.02
GMDS-207ENST00000530459 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
GMDS-207ENST00000530459 MGAM2Q2M2H8 2515 aa2.43□□□□□ -2.02
GMDS-207ENST00000530459 KRTAP10-8P60410 259 aa2.42□□□□□ -2.02
GMDS-207ENST00000530459 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
GMDS-207ENST00000530459 FBN3Q75N90 2809 aa2.42□□□□□ -2.02
GMDS-207ENST00000530459 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
GMDS-207ENST00000530459 STARD9Q9P2P6 4700 aa2.39□□□□□ -2.03
GMDS-207ENST00000530459 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
GMDS-207ENST00000530459 LRP1BQ9NZR2 4599 aa2.38□□□□□ -2.03
GMDS-207ENST00000530459 PKHD1L1Q86WI1 4243 aa2.37□□□□□ -2.03
GMDS-207ENST00000530459 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
GMDS-207ENST00000530459 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
GMDS-207ENST00000530459 DMBT1Q9UGM3 2413 aaPredicted RBP2.34□□□□□ -2.03
GMDS-207ENST00000530459 A0A1B0GVY2 172 aa2.33□□□□□ -2.04
GMDS-207ENST00000530459 SMR3BP02814 79 aaPredicted RBP2.33□□□□□ -2.04
GMDS-207ENST00000530459 VPS13BQ7Z7G8 4022 aa2.33□□□□□ -2.04
GMDS-207ENST00000530459 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
GMDS-207ENST00000530459 PKD1P98161 4303 aa2.32□□□□□ -2.04
GMDS-207ENST00000530459 R4GN34 69 aa2.32□□□□□ -2.04
GMDS-207ENST00000530459 MT3P25713 68 aa2.3□□□□□ -2.04
GMDS-207ENST00000530459 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
GMDS-207ENST00000530459 LCE1AQ5T7P2 110 aa2.28□□□□□ -2.04
GMDS-207ENST00000530459 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
GMDS-207ENST00000530459 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
GMDS-207ENST00000530459 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
GMDS-207ENST00000530459 TNXBP22105 4242 aa2.25□□□□□ -2.05
GMDS-207ENST00000530459 INE1O15225 51 aa2.24□□□□□ -2.05
GMDS-207ENST00000530459 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
GMDS-207ENST00000530459 TNP1P09430 55 aa2.22□□□□□ -2.05
GMDS-207ENST00000530459 FAT1Q14517 4588 aa2.21□□□□□ -2.06
GMDS-207ENST00000530459 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
GMDS-207ENST00000530459 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
GMDS-207ENST00000530459 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
GMDS-207ENST00000530459 HSPG2P98160 4391 aa2.2□□□□□ -2.06
GMDS-207ENST00000530459 Q5VSD8 79 aa2.18□□□□□ -2.06
GMDS-207ENST00000530459 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
GMDS-207ENST00000530459 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
GMDS-207ENST00000530459 DNHD1Q96M86 4753 aa2.11□□□□□ -2.07
GMDS-207ENST00000530459 KRTAP21-3Q3LHN1 58 aa2.09□□□□□ -2.07
GMDS-207ENST00000530459 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
GMDS-207ENST00000530459 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
GMDS-207ENST00000530459 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
GMDS-207ENST00000530459 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
GMDS-207ENST00000530459 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
GMDS-207ENST00000530459 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
GMDS-207ENST00000530459 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
GMDS-207ENST00000530459 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
GMDS-207ENST00000530459 LRP2P98164 4655 aa1.99□□□□□ -2.09
GMDS-207ENST00000530459 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
GMDS-207ENST00000530459 MUC17Q685J3 4493 aa1.99□□□□□ -2.09
GMDS-207ENST00000530459 HERC1Q15751 4861 aa1.98□□□□□ -2.09
GMDS-207ENST00000530459 RYR2Q92736 4967 aa1.98□□□□□ -2.09
GMDS-207ENST00000530459 LPAP08519 4548 aa1.98□□□□□ -2.09
GMDS-207ENST00000530459 RYR1P21817 5038 aa1.96□□□□□ -2.1
GMDS-207ENST00000530459 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
GMDS-207ENST00000530459 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
GMDS-207ENST00000530459 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
GMDS-207ENST00000530459 KMT2CQ8NEZ4 4911 aaKnown RBP1.94□□□□□ -2.1
GMDS-207ENST00000530459 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
GMDS-207ENST00000530459 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
GMDS-207ENST00000530459 KRTAP5-9P26371 169 aa1.9□□□□□ -2.11
GMDS-207ENST00000530459 MT1XP80297 61 aa1.88□□□□□ -2.11
GMDS-207ENST00000530459 KRTAP2-3P0C7H8 128 aa1.87□□□□□ -2.11
GMDS-207ENST00000530459 KRTAP2-4Q9BYR9 128 aa1.87□□□□□ -2.11
GMDS-207ENST00000530459 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
GMDS-207ENST00000530459 MT1BP07438 61 aa1.86□□□□□ -2.11
GMDS-207ENST00000530459 MT2AP02795 61 aa1.84□□□□□ -2.11
GMDS-207ENST00000530459 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms