RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 APLNQ9ULZ1 77 aa3.8□□□□□ -1.8
CTNNA1-225ENST00000520865 RYR1P21817 5038 aa3.79□□□□□ -1.8
CTNNA1-225ENST00000520865 PRLHP81277 87 aa3.79□□□□□ -1.8
CTNNA1-225ENST00000520865 LINC00304Q8N9R0 145 aa3.79□□□□□ -1.8
CTNNA1-225ENST00000520865 P0C880 135 aa3.78□□□□□ -1.8
CTNNA1-225ENST00000520865 DNAH6Q9C0G6 4158 aa3.77□□□□□ -1.81
CTNNA1-225ENST00000520865 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
CTNNA1-225ENST00000520865 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
CTNNA1-225ENST00000520865 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
CTNNA1-225ENST00000520865 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
CTNNA1-225ENST00000520865 Q5W150 140 aa3.76□□□□□ -1.81
CTNNA1-225ENST00000520865 UBE2DNLQ8IWF7 75 aa3.76□□□□□ -1.81
CTNNA1-225ENST00000520865 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
CTNNA1-225ENST00000520865 DNAH11Q96DT5 4516 aa3.76□□□□□ -1.81
CTNNA1-225ENST00000520865 DYNC1H1Q14204 4646 aaKnown RBP3.75□□□□□ -1.81
CTNNA1-225ENST00000520865 PANO1I0J062 215 aa3.75□□□□□ -1.81
CTNNA1-225ENST00000520865 CHTF8P0CG12 524 aa3.75□□□□□ -1.81
CTNNA1-225ENST00000520865 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
CTNNA1-225ENST00000520865 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
CTNNA1-225ENST00000520865 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
CTNNA1-225ENST00000520865 DNAH17Q9UFH2 4485 aa3.74□□□□□ -1.81
CTNNA1-225ENST00000520865 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
CTNNA1-225ENST00000520865 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
CTNNA1-225ENST00000520865 PKD1P98161 4303 aa3.71□□□□□ -1.82
CTNNA1-225ENST00000520865 A0A096LNI7 61 aa3.7□□□□□ -1.82
CTNNA1-225ENST00000520865 A0A1B0GU33 70 aa3.7□□□□□ -1.82
CTNNA1-225ENST00000520865 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
CTNNA1-225ENST00000520865 HSPG2P98160 4391 aa3.7□□□□□ -1.82
CTNNA1-225ENST00000520865 A0A087WTM6 91 aa3.69□□□□□ -1.82
CTNNA1-225ENST00000520865 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
CTNNA1-225ENST00000520865 Q6ZSA8 131 aa3.69□□□□□ -1.82
CTNNA1-225ENST00000520865 H0YAA0 97 aa3.68□□□□□ -1.82
CTNNA1-225ENST00000520865 NBDYA0A0U1RRE5 68 aa3.67□□□□□ -1.82
CTNNA1-225ENST00000520865 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
CTNNA1-225ENST00000520865 LRP1BQ9NZR2 4599 aa3.67□□□□□ -1.82
CTNNA1-225ENST00000520865 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
CTNNA1-225ENST00000520865 SSBP3-AS1Q7Z2R9 100 aa3.66□□□□□ -1.82
CTNNA1-225ENST00000520865 PSORS1C2Q9UIG4 136 aa3.64□□□□□ -1.83
CTNNA1-225ENST00000520865 DNAH5Q8TE73 4624 aa3.64□□□□□ -1.83
CTNNA1-225ENST00000520865 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
CTNNA1-225ENST00000520865 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
CTNNA1-225ENST00000520865 HERC1Q15751 4861 aa3.62□□□□□ -1.83
CTNNA1-225ENST00000520865 DMBT1Q9UGM3 2413 aaPredicted RBP3.6□□□□□ -1.83
CTNNA1-225ENST00000520865 SMR3BP02814 79 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-225ENST00000520865 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
CTNNA1-225ENST00000520865 Q5VSD8 79 aa3.59□□□□□ -1.83
CTNNA1-225ENST00000520865 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-225ENST00000520865 SPINK6Q6UWN8 80 aa3.58□□□□□ -1.84
CTNNA1-225ENST00000520865 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
CTNNA1-225ENST00000520865 FAT1Q14517 4588 aa3.57□□□□□ -1.84
CTNNA1-225ENST00000520865 Q6ZRN7 208 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-225ENST00000520865 KRTAP10-1P60331 282 aa3.56□□□□□ -1.84
CTNNA1-225ENST00000520865 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
CTNNA1-225ENST00000520865 SPINK1P00995 79 aa3.54□□□□□ -1.84
CTNNA1-225ENST00000520865 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
CTNNA1-225ENST00000520865 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
CTNNA1-225ENST00000520865 SPACA4Q8TDM5 124 aa3.53□□□□□ -1.84
CTNNA1-225ENST00000520865 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-225ENST00000520865 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
CTNNA1-225ENST00000520865 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-225ENST00000520865 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
CTNNA1-225ENST00000520865 CIRBP-AS1Q8TBR5 109 aa3.49□□□□□ -1.85
CTNNA1-225ENST00000520865 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CTNNA1-225ENST00000520865 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
CTNNA1-225ENST00000520865 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
CTNNA1-225ENST00000520865 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
CTNNA1-225ENST00000520865 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-225ENST00000520865 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
CTNNA1-225ENST00000520865 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-225ENST00000520865 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-225ENST00000520865 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-225ENST00000520865 FAT3Q8TDW7 4589 aa3.4□□□□□ -1.87
CTNNA1-225ENST00000520865 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CTNNA1-225ENST00000520865 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
CTNNA1-225ENST00000520865 S4R3F8 94 aa3.38□□□□□ -1.87
CTNNA1-225ENST00000520865 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
CTNNA1-225ENST00000520865 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
CTNNA1-225ENST00000520865 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
CTNNA1-225ENST00000520865 KRTAP13-2Q52LG2 175 aa3.33□□□□□ -1.88
CTNNA1-225ENST00000520865 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
CTNNA1-225ENST00000520865 M0QZ58 72 aa3.31□□□□□ -1.88
CTNNA1-225ENST00000520865 LRP2P98164 4655 aa3.31□□□□□ -1.88
CTNNA1-225ENST00000520865 A0A0D9SG42 100 aa3.29□□□□□ -1.88
CTNNA1-225ENST00000520865 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
CTNNA1-225ENST00000520865 TNXBP22105 4242 aa3.29□□□□□ -1.88
CTNNA1-225ENST00000520865 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
CTNNA1-225ENST00000520865 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
CTNNA1-225ENST00000520865 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
CTNNA1-225ENST00000520865 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
CTNNA1-225ENST00000520865 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
CTNNA1-225ENST00000520865 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
CTNNA1-225ENST00000520865 LPAP08519 4548 aa3.21□□□□□ -1.9
CTNNA1-225ENST00000520865 INE1O15225 51 aa3.2□□□□□ -1.9
CTNNA1-225ENST00000520865 MUC2Q02817 5179 aa3.15□□□□□ -1.91
CTNNA1-225ENST00000520865 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
CTNNA1-225ENST00000520865 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
CTNNA1-225ENST00000520865 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
CTNNA1-225ENST00000520865 MUC17Q685J3 4493 aa3.03□□□□□ -1.93
CTNNA1-225ENST00000520865 R4GN34 69 aa3.02□□□□□ -1.93
CTNNA1-225ENST00000520865 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms