RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KRTAP25-1Q3LHN0 102 aa1.54□□□□□ -2.16
HMGB1P41-201ENST00000520234 C1orf134Q5TEV5 83 aa1.54□□□□□ -2.16
HMGB1P41-201ENST00000520234 NBEAL1Q6ZS30 2694 aa1.53□□□□□ -2.16
HMGB1P41-201ENST00000520234 PRLHP81277 87 aa1.53□□□□□ -2.16
HMGB1P41-201ENST00000520234 PCOTHQ58A44 107 aa1.53□□□□□ -2.16
HMGB1P41-201ENST00000520234 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
HMGB1P41-201ENST00000520234 ZNF706Q9Y5V0 76 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P41-201ENST00000520234 DYNC2H1Q8NCM8 4307 aaKnown RBP1.53□□□□□ -2.16
HMGB1P41-201ENST00000520234 CMYA5Q8N3K9 4069 aa1.53□□□□□ -2.17
HMGB1P41-201ENST00000520234 ANK2Q01484 3957 aa1.53□□□□□ -2.17
HMGB1P41-201ENST00000520234 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
HMGB1P41-201ENST00000520234 FLG2Q5D862 2391 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P41-201ENST00000520234 FLNBO75369 2602 aaKnown RBP1.52□□□□□ -2.17
HMGB1P41-201ENST00000520234 NUPR2A6NF83 97 aa1.52□□□□□ -2.17
HMGB1P41-201ENST00000520234 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
HMGB1P41-201ENST00000520234 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
HMGB1P41-201ENST00000520234 NOTCH1P46531 2555 aa1.52□□□□□ -2.17
HMGB1P41-201ENST00000520234 A0A087WTM6 91 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 UQCR11O14957 56 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 ACYP2P14621 99 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 SSBP3-AS1Q7Z2R9 100 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 DNAH10Q8IVF4 4471 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 HUWE1Q7Z6Z7 4374 aaKnown RBP1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 LYSTQ99698 3801 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 STAB1Q9NY15 2570 aa1.51□□□□□ -2.17
HMGB1P41-201ENST00000520234 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
HMGB1P41-201ENST00000520234 CSMD3Q7Z407 3707 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 COL6A5A8TX70 2615 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 DNAH6Q9C0G6 4158 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 DNAH9Q9NYC9 4486 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 A0A1B0GU69 56 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 H0YAA0 97 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 PSORS1C2Q9UIG4 136 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 DNAH17Q9UFH2 4485 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
HMGB1P41-201ENST00000520234 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
HMGB1P41-201ENST00000520234 Q6ZSA8 131 aa1.48□□□□□ -2.17
HMGB1P41-201ENST00000520234 STAB2Q8WWQ8 2551 aa1.47□□□□□ -2.17
HMGB1P41-201ENST00000520234 LY6G6CO95867 125 aa1.47□□□□□ -2.17
HMGB1P41-201ENST00000520234 R4GN34 69 aa1.47□□□□□ -2.17
HMGB1P41-201ENST00000520234 FRAS1Q86XX4 4008 aa1.47□□□□□ -2.17
HMGB1P41-201ENST00000520234 PLECQ15149 4684 aaKnown RBP1.46□□□□□ -2.18
HMGB1P41-201ENST00000520234 C20orf166-AS1Q96NR2 134 aa1.46□□□□□ -2.18
HMGB1P41-201ENST00000520234 MGAM2Q2M2H8 2515 aa1.46□□□□□ -2.18
HMGB1P41-201ENST00000520234 PRKDCP78527 4128 aaKnown RBP1.46□□□□□ -2.18
HMGB1P41-201ENST00000520234 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
HMGB1P41-201ENST00000520234 TPRXLQ17RH7 258 aa1.45□□□□□ -2.18
HMGB1P41-201ENST00000520234 HECTD4Q9Y4D8 3996 aa1.45□□□□□ -2.18
HMGB1P41-201ENST00000520234 DNAH2Q9P225 4427 aa1.45□□□□□ -2.18
HMGB1P41-201ENST00000520234 DNAH7Q8WXX0 4024 aa1.44□□□□□ -2.18
HMGB1P41-201ENST00000520234 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
HMGB1P41-201ENST00000520234 KRTAP6-3Q3LI67 103 aa1.44□□□□□ -2.18
HMGB1P41-201ENST00000520234 TGP01266 2768 aa1.44□□□□□ -2.18
HMGB1P41-201ENST00000520234 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
HMGB1P41-201ENST00000520234 SPINK1P00995 79 aa1.43□□□□□ -2.18
HMGB1P41-201ENST00000520234 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
HMGB1P41-201ENST00000520234 KRTAP21-3Q3LHN1 58 aa1.42□□□□□ -2.18
HMGB1P41-201ENST00000520234 SPINK6Q6UWN8 80 aa1.42□□□□□ -2.18
HMGB1P41-201ENST00000520234 DNAH11Q96DT5 4516 aa1.42□□□□□ -2.18
HMGB1P41-201ENST00000520234 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
HMGB1P41-201ENST00000520234 SACSQ9NZJ4 4579 aa1.41□□□□□ -2.18
HMGB1P41-201ENST00000520234 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
HMGB1P41-201ENST00000520234 A0A1B0GU33 70 aa1.4□□□□□ -2.19
HMGB1P41-201ENST00000520234 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.19
HMGB1P41-201ENST00000520234 DMBT1Q9UGM3 2413 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P41-201ENST00000520234 K7ERS5 55 aa1.39□□□□□ -2.19
HMGB1P41-201ENST00000520234 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P41-201ENST00000520234 KMT2AQ03164 3969 aa1.39□□□□□ -2.19
HMGB1P41-201ENST00000520234 PKD1P98161 4303 aa1.39□□□□□ -2.19
HMGB1P41-201ENST00000520234 DNAH5Q8TE73 4624 aa1.38□□□□□ -2.19
HMGB1P41-201ENST00000520234 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P41-201ENST00000520234 COX6B2Q6YFQ2 88 aa1.38□□□□□ -2.19
HMGB1P41-201ENST00000520234 CRIPTQ9P021 101 aa1.38□□□□□ -2.19
HMGB1P41-201ENST00000520234 PKHD1L1Q86WI1 4243 aa1.38□□□□□ -2.19
HMGB1P41-201ENST00000520234 KRTAP13-4Q3LI77 160 aa1.37□□□□□ -2.19
HMGB1P41-201ENST00000520234 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
HMGB1P41-201ENST00000520234 C10orf95Q9H7T3 257 aa1.35□□□□□ -2.19
HMGB1P41-201ENST00000520234 RPL37P61927 97 aaKnown RBP1.34□□□□□ -2.19
HMGB1P41-201ENST00000520234 VPS13BQ7Z7G8 4022 aa1.33□□□□□ -2.2
HMGB1P41-201ENST00000520234 LRP1Q07954 4544 aaKnown RBP1.32□□□□□ -2.2
HMGB1P41-201ENST00000520234 HYDINQ4G0P3 5121 aa1.32□□□□□ -2.2
HMGB1P41-201ENST00000520234 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
HMGB1P41-201ENST00000520234 DYNC1H1Q14204 4646 aaKnown RBP1.32□□□□□ -2.2
HMGB1P41-201ENST00000520234 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P41-201ENST00000520234 KRTAP12-1P59990 96 aa1.31□□□□□ -2.2
HMGB1P41-201ENST00000520234 S4R3F8 94 aa1.31□□□□□ -2.2
HMGB1P41-201ENST00000520234 APOBP04114 4563 aaKnown RBP1.31□□□□□ -2.2
HMGB1P41-201ENST00000520234 TNXBP22105 4242 aa1.31□□□□□ -2.2
HMGB1P41-201ENST00000520234 C9orf92A6NGG3 77 aa1.3□□□□□ -2.2
HMGB1P41-201ENST00000520234 PKHD1P08F94 4074 aa1.3□□□□□ -2.2
HMGB1P41-201ENST00000520234 MYCBP2O75592 4640 aa1.3□□□□□ -2.2
HMGB1P41-201ENST00000520234 HSPG2P98160 4391 aa1.28□□□□□ -2.2
HMGB1P41-201ENST00000520234 FAT3Q8TDW7 4589 aa1.28□□□□□ -2.2
HMGB1P41-201ENST00000520234 FAT1Q14517 4588 aa1.28□□□□□ -2.21
HMGB1P41-201ENST00000520234 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
HMGB1P41-201ENST00000520234 RYR2Q92736 4967 aa1.26□□□□□ -2.21
HMGB1P41-201ENST00000520234 PLAC4Q8WY50 150 aa1.26□□□□□ -2.21
HMGB1P41-201ENST00000520234 A0A0D9SG42 100 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms