RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 KRTAP4-1Q9BYQ7 146 aa1.29□□□□□ -2.2
VPS13B-207ENST00000518569 TNCP24821 2201 aa1.29□□□□□ -2.2
VPS13B-207ENST00000518569 DMBT1Q9UGM3 2413 aaPredicted RBP1.28□□□□□ -2.2
VPS13B-207ENST00000518569 H0YGG7 62 aa1.28□□□□□ -2.2
VPS13B-207ENST00000518569 K7EIL1 84 aa1.28□□□□□ -2.2
VPS13B-207ENST00000518569 DYNC2H1Q8NCM8 4307 aaKnown RBP1.28□□□□□ -2.2
VPS13B-207ENST00000518569 HERC1Q15751 4861 aa1.27□□□□□ -2.21
VPS13B-207ENST00000518569 LYNX1P0DP58 116 aa1.27□□□□□ -2.21
VPS13B-207ENST00000518569 SACSQ9NZJ4 4579 aa1.26□□□□□ -2.21
VPS13B-207ENST00000518569 SORL1Q92673 2214 aa1.26□□□□□ -2.21
VPS13B-207ENST00000518569 C6orf48Q9UBA6 75 aa1.26□□□□□ -2.21
VPS13B-207ENST00000518569 I3L2K1 104 aa1.25□□□□□ -2.21
VPS13B-207ENST00000518569 KMT2AQ03164 3969 aa1.25□□□□□ -2.21
VPS13B-207ENST00000518569 STARD9Q9P2P6 4700 aa1.25□□□□□ -2.21
VPS13B-207ENST00000518569 COX6A2Q02221 97 aa1.24□□□□□ -2.21
VPS13B-207ENST00000518569 PRO0255Q9UI72 69 aa1.24□□□□□ -2.21
VPS13B-207ENST00000518569 ALMS1Q8TCU4 4167 aa1.24□□□□□ -2.21
VPS13B-207ENST00000518569 PKHD1P08F94 4074 aa1.24□□□□□ -2.21
VPS13B-207ENST00000518569 ABCA13Q86UQ4 5058 aa1.24□□□□□ -2.21
VPS13B-207ENST00000518569 SPINK9Q5DT21 86 aa1.23□□□□□ -2.21
VPS13B-207ENST00000518569 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
VPS13B-207ENST00000518569 FLG2Q5D862 2391 aaPredicted RBP1.22□□□□□ -2.21
VPS13B-207ENST00000518569 KIAA1109Q2LD37 5005 aa1.21□□□□□ -2.22
VPS13B-207ENST00000518569 IAPPP10997 89 aa1.21□□□□□ -2.22
VPS13B-207ENST00000518569 DEFB108BQ8NET1 73 aa1.21□□□□□ -2.22
VPS13B-207ENST00000518569 HUWE1Q7Z6Z7 4374 aaKnown RBP1.21□□□□□ -2.22
VPS13B-207ENST00000518569 H3BUA1 57 aa1.2□□□□□ -2.22
VPS13B-207ENST00000518569 PRB3Q04118 309 aaPredicted RBP1.2□□□□□ -2.22
VPS13B-207ENST00000518569 Q5VSD8 79 aa1.2□□□□□ -2.22
VPS13B-207ENST00000518569 H0YAA0 97 aa1.19□□□□□ -2.22
VPS13B-207ENST00000518569 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
VPS13B-207ENST00000518569 PLECQ15149 4684 aaKnown RBP1.18□□□□□ -2.22
VPS13B-207ENST00000518569 HSPG2P98160 4391 aa1.18□□□□□ -2.22
VPS13B-207ENST00000518569 H3BUX3 64 aa1.18□□□□□ -2.22
VPS13B-207ENST00000518569 DEFB131AP59861 70 aa1.18□□□□□ -2.22
VPS13B-207ENST00000518569 DNAH6Q9C0G6 4158 aa1.18□□□□□ -2.22
VPS13B-207ENST00000518569 RNF213Q63HN8 5207 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 MUC2Q02817 5179 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 H1FX-AS1Q4G0G2 97 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 WFDC10BQ8IUB3 73 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 DEFB105AQ8NG35 78 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 ARHGAP5-AS1Q96IT6 56 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 DNAH10Q8IVF4 4471 aa1.17□□□□□ -2.22
VPS13B-207ENST00000518569 FAT2Q9NYQ8 4349 aa1.16□□□□□ -2.22
VPS13B-207ENST00000518569 IGLV5-48A0A075B6I7 105 aa1.16□□□□□ -2.22
VPS13B-207ENST00000518569 H3BSH0 61 aa1.16□□□□□ -2.22
VPS13B-207ENST00000518569 DEFB136Q30KP8 78 aa1.16□□□□□ -2.22
VPS13B-207ENST00000518569 WFDC13Q8IUB5 93 aa1.16□□□□□ -2.22
VPS13B-207ENST00000518569 PKD1P98161 4303 aa1.16□□□□□ -2.22
VPS13B-207ENST00000518569 SPRR1AP35321 89 aa1.15□□□□□ -2.23
VPS13B-207ENST00000518569 RPS27P42677 84 aaKnown RBP1.15□□□□□ -2.23
VPS13B-207ENST00000518569 Q6ZSA8 131 aa1.15□□□□□ -2.23
VPS13B-207ENST00000518569 RPS27LQ71UM5 84 aaKnown RBP1.15□□□□□ -2.23
VPS13B-207ENST00000518569 VPS13BQ7Z7G8 4022 aa1.15□□□□□ -2.23
VPS13B-207ENST00000518569 APOBP04114 4563 aaKnown RBP1.15□□□□□ -2.23
VPS13B-207ENST00000518569 DNAH2Q9P225 4427 aa1.14□□□□□ -2.23
VPS13B-207ENST00000518569 DEFB130BP0DP73 79 aa1.14□□□□□ -2.23
VPS13B-207ENST00000518569 DEFB130AP0DP74 79 aa1.14□□□□□ -2.23
VPS13B-207ENST00000518569 POLR2KP53803 58 aaKnown RBP1.14□□□□□ -2.23
VPS13B-207ENST00000518569 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
VPS13B-207ENST00000518569 WT1-ASQ06250 92 aa1.13□□□□□ -2.23
VPS13B-207ENST00000518569 KAAG1Q9UBP8 84 aa1.13□□□□□ -2.23
VPS13B-207ENST00000518569 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
VPS13B-207ENST00000518569 DNAH5Q8TE73 4624 aa1.12□□□□□ -2.23
VPS13B-207ENST00000518569 DYNC1H1Q14204 4646 aaKnown RBP1.12□□□□□ -2.23
VPS13B-207ENST00000518569 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
VPS13B-207ENST00000518569 DNAH17Q9UFH2 4485 aa1.11□□□□□ -2.23
VPS13B-207ENST00000518569 SMR3BP02814 79 aaPredicted RBP1.11□□□□□ -2.23
VPS13B-207ENST00000518569 SPRR1BP22528 89 aa1.11□□□□□ -2.23
VPS13B-207ENST00000518569 RPL39P62891 51 aaKnown RBP1.11□□□□□ -2.23
VPS13B-207ENST00000518569 DNAH11Q96DT5 4516 aa1.1□□□□□ -2.23
VPS13B-207ENST00000518569 FAT4Q6V0I7 4981 aa1.1□□□□□ -2.23
VPS13B-207ENST00000518569 NOP10Q9NPE3 64 aaKnown RBP1.1□□□□□ -2.23
VPS13B-207ENST00000518569 LRP1BQ9NZR2 4599 aa1.09□□□□□ -2.23
VPS13B-207ENST00000518569 DEFB135Q30KP9 77 aa1.09□□□□□ -2.23
VPS13B-207ENST00000518569 LELP1Q5T871 98 aa1.09□□□□□ -2.23
VPS13B-207ENST00000518569 LINC01590Q5TEZ4 76 aa1.09□□□□□ -2.23
VPS13B-207ENST00000518569 LRP2P98164 4655 aa1.09□□□□□ -2.24
VPS13B-207ENST00000518569 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
VPS13B-207ENST00000518569 MMP24-AS1A0A0U1RRL7 71 aa1.08□□□□□ -2.24
VPS13B-207ENST00000518569 DEFB4AO15263 64 aa1.08□□□□□ -2.24
VPS13B-207ENST00000518569 PRLHP81277 87 aa1.08□□□□□ -2.24
VPS13B-207ENST00000518569 DEFB104AQ8WTQ1 72 aa1.08□□□□□ -2.24
VPS13B-207ENST00000518569 RPL39LQ96EH5 51 aaKnown RBP1.08□□□□□ -2.24
VPS13B-207ENST00000518569 TTTY10Q9BZA0 68 aa1.08□□□□□ -2.24
VPS13B-207ENST00000518569 A0A0D9SG42 100 aa1.07□□□□□ -2.24
VPS13B-207ENST00000518569 PRCDQ00LT1 54 aa1.07□□□□□ -2.24
VPS13B-207ENST00000518569 PKHD1L1Q86WI1 4243 aa1.07□□□□□ -2.24
VPS13B-207ENST00000518569 HTN3P15516 51 aa1.05□□□□□ -2.24
VPS13B-207ENST00000518569 S4R3F8 94 aa1.05□□□□□ -2.24
VPS13B-207ENST00000518569 FAT1Q14517 4588 aa1.05□□□□□ -2.24
VPS13B-207ENST00000518569 LRP1Q07954 4544 aaKnown RBP1.05□□□□□ -2.24
VPS13B-207ENST00000518569 M0QY20 66 aa1.04□□□□□ -2.24
VPS13B-207ENST00000518569 KLK9Q2XQG4 91 aa1.04□□□□□ -2.24
VPS13B-207ENST00000518569 LEAP2Q969E1 77 aa1.04□□□□□ -2.24
VPS13B-207ENST00000518569 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.24
VPS13B-207ENST00000518569 A8MTW9 85 aa1.02□□□□□ -2.25
VPS13B-207ENST00000518569 APELAP0DMC3 54 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms