RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 DYNC2H1Q8NCM8 4307 aaKnown RBP3.43□□□□□ -1.86
RN7SKP248-201ENST00000516278 ANK2Q01484 3957 aa3.43□□□□□ -1.86
RN7SKP248-201ENST00000516278 NBEAL1Q6ZS30 2694 aa3.42□□□□□ -1.86
RN7SKP248-201ENST00000516278 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
RN7SKP248-201ENST00000516278 LYSTQ99698 3801 aa3.39□□□□□ -1.87
RN7SKP248-201ENST00000516278 FBN1P35555 2871 aaKnown RBP3.39□□□□□ -1.87
RN7SKP248-201ENST00000516278 STAB2Q8WWQ8 2551 aa3.37□□□□□ -1.87
RN7SKP248-201ENST00000516278 HUWE1Q7Z6Z7 4374 aaKnown RBP3.36□□□□□ -1.87
RN7SKP248-201ENST00000516278 CMYA5Q8N3K9 4069 aa3.35□□□□□ -1.87
RN7SKP248-201ENST00000516278 NOTCH1P46531 2555 aa3.35□□□□□ -1.87
RN7SKP248-201ENST00000516278 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
RN7SKP248-201ENST00000516278 COL6A5A8TX70 2615 aa3.34□□□□□ -1.87
RN7SKP248-201ENST00000516278 STAB1Q9NY15 2570 aa3.34□□□□□ -1.88
RN7SKP248-201ENST00000516278 DNAH10Q8IVF4 4471 aa3.34□□□□□ -1.88
RN7SKP248-201ENST00000516278 P0C880 135 aa3.33□□□□□ -1.88
RN7SKP248-201ENST00000516278 M0QZ58 72 aa3.32□□□□□ -1.88
RN7SKP248-201ENST00000516278 TGP01266 2768 aa3.32□□□□□ -1.88
RN7SKP248-201ENST00000516278 VPS13DQ5THJ4 4388 aa3.31□□□□□ -1.88
RN7SKP248-201ENST00000516278 COL7A1Q02388 2944 aa3.31□□□□□ -1.88
RN7SKP248-201ENST00000516278 S4R3F8 94 aa3.3□□□□□ -1.88
RN7SKP248-201ENST00000516278 DNAH9Q9NYC9 4486 aa3.3□□□□□ -1.88
RN7SKP248-201ENST00000516278 MEGF8Q7Z7M0 2845 aa3.3□□□□□ -1.88
RN7SKP248-201ENST00000516278 DNAH8Q96JB1 4490 aa3.3□□□□□ -1.88
RN7SKP248-201ENST00000516278 KRTAP10-1P60331 282 aa3.28□□□□□ -1.88
RN7SKP248-201ENST00000516278 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
RN7SKP248-201ENST00000516278 DNAH7Q8WXX0 4024 aa3.26□□□□□ -1.89
RN7SKP248-201ENST00000516278 MGAM2Q2M2H8 2515 aa3.26□□□□□ -1.89
RN7SKP248-201ENST00000516278 PRKDCP78527 4128 aaKnown RBP3.25□□□□□ -1.89
RN7SKP248-201ENST00000516278 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
RN7SKP248-201ENST00000516278 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
RN7SKP248-201ENST00000516278 FRAS1Q86XX4 4008 aa3.25□□□□□ -1.89
RN7SKP248-201ENST00000516278 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
RN7SKP248-201ENST00000516278 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
RN7SKP248-201ENST00000516278 DNAH6Q9C0G6 4158 aa3.22□□□□□ -1.89
RN7SKP248-201ENST00000516278 A0A0D9SG42 100 aa3.22□□□□□ -1.89
RN7SKP248-201ENST00000516278 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
RN7SKP248-201ENST00000516278 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
RN7SKP248-201ENST00000516278 PLECQ15149 4684 aaKnown RBP3.21□□□□□ -1.9
RN7SKP248-201ENST00000516278 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
RN7SKP248-201ENST00000516278 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
RN7SKP248-201ENST00000516278 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
RN7SKP248-201ENST00000516278 FBN3Q75N90 2809 aa3.18□□□□□ -1.9
RN7SKP248-201ENST00000516278 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
RN7SKP248-201ENST00000516278 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
RN7SKP248-201ENST00000516278 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
RN7SKP248-201ENST00000516278 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
RN7SKP248-201ENST00000516278 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
RN7SKP248-201ENST00000516278 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
RN7SKP248-201ENST00000516278 R4GN34 69 aa3.09□□□□□ -1.91
RN7SKP248-201ENST00000516278 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
RN7SKP248-201ENST00000516278 STARD9Q9P2P6 4700 aa3.08□□□□□ -1.92
RN7SKP248-201ENST00000516278 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
RN7SKP248-201ENST00000516278 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
RN7SKP248-201ENST00000516278 SACSQ9NZJ4 4579 aa3.08□□□□□ -1.92
RN7SKP248-201ENST00000516278 KRTAP10-4P60372 401 aaPredicted RBP3.07□□□□□ -1.92
RN7SKP248-201ENST00000516278 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
RN7SKP248-201ENST00000516278 KMT2AQ03164 3969 aa3.06□□□□□ -1.92
RN7SKP248-201ENST00000516278 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
RN7SKP248-201ENST00000516278 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
RN7SKP248-201ENST00000516278 LRP1BQ9NZR2 4599 aa3.06□□□□□ -1.92
RN7SKP248-201ENST00000516278 DNAH5Q8TE73 4624 aa3.06□□□□□ -1.92
RN7SKP248-201ENST00000516278 PKD1P98161 4303 aa3.05□□□□□ -1.92
RN7SKP248-201ENST00000516278 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
RN7SKP248-201ENST00000516278 PKHD1L1Q86WI1 4243 aa3.04□□□□□ -1.92
RN7SKP248-201ENST00000516278 DMBT1Q9UGM3 2413 aaPredicted RBP3.03□□□□□ -1.92
RN7SKP248-201ENST00000516278 PKHD1P08F94 4074 aa3.01□□□□□ -1.93
RN7SKP248-201ENST00000516278 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
RN7SKP248-201ENST00000516278 KRTAP21-3Q3LHN1 58 aa2.97□□□□□ -1.93
RN7SKP248-201ENST00000516278 FAT2Q9NYQ8 4349 aa2.96□□□□□ -1.94
RN7SKP248-201ENST00000516278 APOBP04114 4563 aaKnown RBP2.95□□□□□ -1.94
RN7SKP248-201ENST00000516278 TNP1P09430 55 aa2.95□□□□□ -1.94
RN7SKP248-201ENST00000516278 Q5VSD8 79 aa2.93□□□□□ -1.94
RN7SKP248-201ENST00000516278 INE1O15225 51 aa2.91□□□□□ -1.94
RN7SKP248-201ENST00000516278 TNXBP22105 4242 aa2.9□□□□□ -1.94
RN7SKP248-201ENST00000516278 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
RN7SKP248-201ENST00000516278 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
RN7SKP248-201ENST00000516278 LRP1Q07954 4544 aaKnown RBP2.88□□□□□ -1.95
RN7SKP248-201ENST00000516278 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
RN7SKP248-201ENST00000516278 HSPG2P98160 4391 aa2.86□□□□□ -1.95
RN7SKP248-201ENST00000516278 FAT3Q8TDW7 4589 aa2.86□□□□□ -1.95
RN7SKP248-201ENST00000516278 DYNC1H1Q14204 4646 aaKnown RBP2.84□□□□□ -1.95
RN7SKP248-201ENST00000516278 FAT1Q14517 4588 aa2.84□□□□□ -1.96
RN7SKP248-201ENST00000516278 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
RN7SKP248-201ENST00000516278 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
RN7SKP248-201ENST00000516278 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
RN7SKP248-201ENST00000516278 DNHD1Q96M86 4753 aa2.73□□□□□ -1.97
RN7SKP248-201ENST00000516278 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
RN7SKP248-201ENST00000516278 HYDINQ4G0P3 5121 aa2.68□□□□□ -1.98
RN7SKP248-201ENST00000516278 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
RN7SKP248-201ENST00000516278 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
RN7SKP248-201ENST00000516278 KRTAP8-1Q8IUC2 63 aa2.63□□□□□ -1.99
RN7SKP248-201ENST00000516278 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
RN7SKP248-201ENST00000516278 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
RN7SKP248-201ENST00000516278 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
RN7SKP248-201ENST00000516278 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
RN7SKP248-201ENST00000516278 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
RN7SKP248-201ENST00000516278 RYR2Q92736 4967 aa2.55□□□□□ -2
RN7SKP248-201ENST00000516278 LRP2P98164 4655 aa2.54□□□□□ -2
RN7SKP248-201ENST00000516278 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
RN7SKP248-201ENST00000516278 MUC17Q685J3 4493 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms