RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 H3BUX3 64 aa0.66□□□□□ -2.3
AC025539.1-201ENST00000515343 MRPL33O75394 65 aaKnown RBP0.66□□□□□ -2.3
AC025539.1-201ENST00000515343 MUSTN1Q8IVN3 82 aa0.66□□□□□ -2.3
AC025539.1-201ENST00000515343 CPSF4LA6NMK7 179 aaKnown RBP0.65□□□□□ -2.3
AC025539.1-201ENST00000515343 FXYD6P3P58550 94 aa0.65□□□□□ -2.3
AC025539.1-201ENST00000515343 SPAG11BQ08648 103 aa0.65□□□□□ -2.3
AC025539.1-201ENST00000515343 C10orf113Q5VZT2 155 aa0.65□□□□□ -2.3
AC025539.1-201ENST00000515343 SPAG11AQ6PDA7 123 aa0.65□□□□□ -2.3
AC025539.1-201ENST00000515343 H3BRN7 92 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 H3BUA1 57 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 NDUFB1O75438 58 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 MT1HP80294 61 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 IGKV2-29A2NJV5 120 aaPredicted RBP0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 PPP1R17O96001 155 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 FXYD3Q14802 87 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 C10orf55Q5SWW7 151 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 SFTA2Q6UW10 78 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 BRD3OSQ6XYD6 125 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 COA5Q86WW8 74 aa0.65□□□□□ -2.31
AC025539.1-201ENST00000515343 PRH1P02810 166 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 LYNX1P0DP58 116 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 TRGV4A0A0C4DH28 118 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 M0R2T5 61 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 PCOTHQ58A44 107 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 SORL1Q92673 2214 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 H3BNG1 76 aa0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 RPL37AP61513 92 aaKnown RBP0.64□□□□□ -2.31
AC025539.1-201ENST00000515343 RPS27P42677 84 aaKnown RBP0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 KLK9Q2XQG4 91 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 MGPP08493 103 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 SPRR2EP22531 72 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 SPRR2DP22532 72 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 SPRR2BP35325 72 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 SPRR2AP35326 72 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 LINC01590Q5TEZ4 76 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 WFDC10AQ9H1F0 79 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 DEFB131BA0A096LNP1 70 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 JMJD7-PLA2G4BH0Y9G9 81 aa0.63□□□□□ -2.31
AC025539.1-201ENST00000515343 NDUFA4O00483 81 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 SPINK6Q6UWN8 80 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 UBE2DNLQ8IWF7 75 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 TTTY10Q9BZA0 68 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 R4GMQ9 66 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 M0R3E3 92 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 DNAL4O96015 105 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 CRIP1P50238 77 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
AC025539.1-201ENST00000515343 GVQW2A0A096LPI5 108 aaPredicted RBP0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 TRGV1A0A0A0MS02 117 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 H0YAA0 97 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 H3BSH0 61 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 PRB3Q04118 309 aaPredicted RBP0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 COX17Q14061 63 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 GAFA1Q96PS6 74 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 TRGV2A0A075B6R0 118 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 ARL14EPLP0DKL9 152 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 COX7BP24311 80 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 ETDCA0A1B0GVM5 59 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 I3L2K1 104 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 FXYD4P59646 89 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 KRTAP13-4Q3LI77 160 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 Q6ZRX8 168 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 UBL5Q9BZL1 73 aa0.61□□□□□ -2.31
AC025539.1-201ENST00000515343 NCR3O14931 201 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 PIGYQ3MUY2 71 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 ANGP03950 147 aaKnown RBP0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 LEAP2Q969E1 77 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 H0YGX0 51 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 NDUFA1O15239 70 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 KRTAP12-3P60328 96 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 Q6ZQY7 126 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 SMIM2Q9BVW6 85 aa0.6□□□□□ -2.31
AC025539.1-201ENST00000515343 SPINK4O60575 86 aa0.59□□□□□ -2.31
AC025539.1-201ENST00000515343 LINC00308Q8TCZ7 52 aa0.59□□□□□ -2.31
AC025539.1-201ENST00000515343 PLAC4Q8WY50 150 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 TMEM167BQ9NRX6 74 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 NDUFA3O95167 84 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 RPL39P5Q59GN2 51 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 Q8IZM0 81 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 ARHGAP5-AS1Q96IT6 56 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 USMG5Q96IX5 58 aa0.59□□□□□ -2.32
AC025539.1-201ENST00000515343 POLR2KP53803 58 aaKnown RBP0.58□□□□□ -2.32
AC025539.1-201ENST00000515343 DEFB136Q30KP8 78 aa0.58□□□□□ -2.32
AC025539.1-201ENST00000515343 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.58□□□□□ -2.32
AC025539.1-201ENST00000515343 TNCP24821 2201 aa0.58□□□□□ -2.32
AC025539.1-201ENST00000515343 IGLV5-48A0A075B6I7 105 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 SPART-AS1P0CW21 52 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 APELAP0DMC3 54 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 SMIM11BQ8TCY0 68 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 C10orf95Q9H7T3 257 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 A0A1B0GU69 56 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 RPL37P61927 97 aaKnown RBP0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 UNQ6190/PRO20217Q6UXQ8 127 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 TMEM167AQ8TBQ9 72 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 WT1-ASQ06250 92 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 DEFB135Q30KP9 77 aa0.57□□□□□ -2.32
AC025539.1-201ENST00000515343 K7EIM0 57 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms