RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 CCDC18Q5T9S5 1454 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 CRIP1P50238 77 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 C18orf32Q8TCD1 76 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 RNF17Q9BXT8 1623 aaKnown RBP-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 ASXL1Q8IXJ9 1541 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 KIAA0586Q9BVV6 1533 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 CFAP47Q6ZTR5 3102 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 VCANP13611 3396 aa-0.65□□□□□ -2.51
TRAPPC11-210ENST00000513600 CFAP74Q9C0B2 1584 aa-0.65□□□□□ -2.51
TRAPPC11-210ENST00000513600 SZT2Q5T011 3432 aa-0.65□□□□□ -2.51
TRAPPC11-210ENST00000513600 CDC42BPAQ5VT25 1732 aa-0.66□□□□□ -2.51
TRAPPC11-210ENST00000513600 WT1-ASQ06250 92 aa-0.66□□□□□ -2.52
TRAPPC11-210ENST00000513600 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.66□□□□□ -2.52
TRAPPC11-210ENST00000513600 ANKRD36CQ5JPF3 1778 aa-0.66□□□□□ -2.52
TRAPPC11-210ENST00000513600 ANKARQ7Z5J8 1434 aa-0.66□□□□□ -2.52
TRAPPC11-210ENST00000513600 SMARCA2P51531 1590 aa-0.66□□□□□ -2.52
TRAPPC11-210ENST00000513600 INO80Q9ULG1 1556 aaPredicted RBP-0.66□□□□□ -2.52
TRAPPC11-210ENST00000513600 VPS13CQ709C8 3753 aa-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 ETDCA0A1B0GVM5 59 aa-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 TNP1P09430 55 aa-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 RPS27P42677 84 aaKnown RBP-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 ENHOQ6UWT2 76 aa-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 RPS27LQ71UM5 84 aaKnown RBP-0.67□□□□□ -2.52
TRAPPC11-210ENST00000513600 ITSN2Q9NZM3 1697 aa-0.68□□□□□ -2.52
TRAPPC11-210ENST00000513600 DEFB136Q30KP8 78 aa-0.68□□□□□ -2.52
TRAPPC11-210ENST00000513600 UNC80Q8N2C7 3258 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 LMTK2Q8IWU2 1503 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 PARP4Q9UKK3 1724 aaKnown RBP-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 TOGARAM1Q9Y4F4 1720 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 IGLV5-48A0A075B6I7 105 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 MMP24-AS1A0A0U1RRL7 71 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 LINC01546A6NGU7 62 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 MINOS1Q5TGZ0 78 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 NRAPQ86VF7 1730 aa-0.69□□□□□ -2.52
TRAPPC11-210ENST00000513600 PCNTO95613 3336 aa-0.7□□□□□ -2.52
TRAPPC11-210ENST00000513600 RRBP1Q9P2E9 1410 aaKnown RBP-0.7□□□□□ -2.52
TRAPPC11-210ENST00000513600 H3BVH4 76 aa-0.7□□□□□ -2.52
TRAPPC11-210ENST00000513600 DEFB114Q30KQ6 69 aa-0.7□□□□□ -2.52
TRAPPC11-210ENST00000513600 LRRIQ1Q96JM4 1722 aa-0.7□□□□□ -2.52
TRAPPC11-210ENST00000513600 KIF1AQ12756 1690 aa-0.71□□□□□ -2.52
TRAPPC11-210ENST00000513600 NHSQ6T4R5 1651 aa-0.71□□□□□ -2.52
TRAPPC11-210ENST00000513600 DNAH12Q6ZR08 3092 aa-0.71□□□□□ -2.52
TRAPPC11-210ENST00000513600 H3BUA1 57 aa-0.71□□□□□ -2.52
TRAPPC11-210ENST00000513600 A8MTW9 85 aa-0.72□□□□□ -2.52
TRAPPC11-210ENST00000513600 KRTAP19-2Q3LHN2 52 aa-0.72□□□□□ -2.52
TRAPPC11-210ENST00000513600 TTTY10Q9BZA0 68 aa-0.72□□□□□ -2.52
TRAPPC11-210ENST00000513600 C6orf48Q9UBA6 75 aa-0.72□□□□□ -2.52
TRAPPC11-210ENST00000513600 ABCA8O94911 1581 aa-0.72□□□□□ -2.52
TRAPPC11-210ENST00000513600 ASPMQ8IZT6 3477 aa-0.72□□□□□ -2.53
TRAPPC11-210ENST00000513600 SPART-AS1P0CW21 52 aa-0.73□□□□□ -2.53
TRAPPC11-210ENST00000513600 LY75O60449 1722 aa-0.73□□□□□ -2.53
TRAPPC11-210ENST00000513600 CENPFP49454 3210 aa-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 DIP2AQ14689 1571 aa-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 ATXN8Q156A1 80 aa-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 NCBP2-AS2Q69YL0 99 aa-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 NOP10Q9NPE3 64 aaKnown RBP-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 ABCC6O95255 1503 aa-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 BRCA2P51587 3418 aa-0.74□□□□□ -2.53
TRAPPC11-210ENST00000513600 M0QZ58 72 aa-0.75□□□□□ -2.53
TRAPPC11-210ENST00000513600 FCER1GP30273 86 aa-0.75□□□□□ -2.53
TRAPPC11-210ENST00000513600 LEAP2Q969E1 77 aa-0.75□□□□□ -2.53
TRAPPC11-210ENST00000513600 CDH23Q9H251 3354 aa-0.76□□□□□ -2.53
TRAPPC11-210ENST00000513600 MYO5CQ9NQX4 1742 aa-0.77□□□□□ -2.53
TRAPPC11-210ENST00000513600 C3P01024 1663 aa-0.77□□□□□ -2.53
TRAPPC11-210ENST00000513600 DNMBPQ6XZF7 1577 aa-0.77□□□□□ -2.53
TRAPPC11-210ENST00000513600 MAST1Q9Y2H9 1570 aa-0.77□□□□□ -2.53
TRAPPC11-210ENST00000513600 EEA1Q15075 1411 aa-0.77□□□□□ -2.53
TRAPPC11-210ENST00000513600 CLASP1Q7Z460 1538 aa-0.78□□□□□ -2.53
TRAPPC11-210ENST00000513600 SFTA3P0C7M3 94 aa-0.78□□□□□ -2.53
TRAPPC11-210ENST00000513600 HILPDAQ9Y5L2 63 aa-0.78□□□□□ -2.53
TRAPPC11-210ENST00000513600 DEFB104AQ8WTQ1 72 aa-0.79□□□□□ -2.54
TRAPPC11-210ENST00000513600 M0QY20 66 aa-0.8□□□□□ -2.54
TRAPPC11-210ENST00000513600 GNG13Q9P2W3 67 aa-0.8□□□□□ -2.54
TRAPPC11-210ENST00000513600 MROH1Q8NDA8 1641 aa-0.8□□□□□ -2.54
TRAPPC11-210ENST00000513600 DUOX2Q9NRD8 1548 aa-0.8□□□□□ -2.54
TRAPPC11-210ENST00000513600 A0A1B0GUL6 1792 aa-0.8□□□□□ -2.54
TRAPPC11-210ENST00000513600 VPS13AQ96RL7 3174 aa-0.81□□□□□ -2.54
TRAPPC11-210ENST00000513600 K7EMI3 77 aa-0.81□□□□□ -2.54
TRAPPC11-210ENST00000513600 UGGT2Q9NYU1 1516 aa-0.81□□□□□ -2.54
TRAPPC11-210ENST00000513600 UTRNP46939 3433 aa-0.82□□□□□ -2.54
TRAPPC11-210ENST00000513600 NRXN3Q9Y4C0 1643 aa-0.82□□□□□ -2.54
TRAPPC11-210ENST00000513600 SMCO4Q9NRQ5 59 aa-0.82□□□□□ -2.54
TRAPPC11-210ENST00000513600 KIF21BO75037 1637 aa-0.82□□□□□ -2.54
TRAPPC11-210ENST00000513600 IQGAP3Q86VI3 1631 aa-0.82□□□□□ -2.54
TRAPPC11-210ENST00000513600 ABCA9Q8IUA7 1624 aa-0.82□□□□□ -2.54
TRAPPC11-210ENST00000513600 CROCC2H7BZ55 1655 aa-0.83□□□□□ -2.54
TRAPPC11-210ENST00000513600 PDCD5O14737 125 aa-0.83□□□□□ -2.54
TRAPPC11-210ENST00000513600 CD52P31358 61 aa-0.83□□□□□ -2.54
TRAPPC11-210ENST00000513600 XIRP2A4UGR9 3374 aa-0.83□□□□□ -2.54
TRAPPC11-210ENST00000513600 MADDQ8WXG6 1647 aa-0.84□□□□□ -2.54
TRAPPC11-210ENST00000513600 TIAM1Q13009 1591 aa-0.84□□□□□ -2.54
TRAPPC11-210ENST00000513600 LINC01549A6NIU2 74 aa-0.85□□□□□ -2.55
TRAPPC11-210ENST00000513600 GLI2P10070 1586 aa-0.86□□□□□ -2.55
TRAPPC11-210ENST00000513600 DEFB133Q30KQ1 61 aa-0.86□□□□□ -2.55
TRAPPC11-210ENST00000513600 ABRACLQ9P1F3 81 aa-0.87□□□□□ -2.55
TRAPPC11-210ENST00000513600 LMO7Q8WWI1 1683 aa-0.88□□□□□ -2.55
TRAPPC11-210ENST00000513600 GOLGB1Q14789 3259 aaKnown RBP-0.88□□□□□ -2.55
TRAPPC11-210ENST00000513600 M0R1W7 72 aa-0.88□□□□□ -2.55
TRAPPC11-210ENST00000513600 SERF2P84101 59 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms