RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 H3BQ85 93 aa3.18□□□□□ -1.9
CLCN3-208ENST00000512813 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
CLCN3-208ENST00000512813 PET117Q6UWS5 81 aa3.18□□□□□ -1.9
CLCN3-208ENST00000512813 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
CLCN3-208ENST00000512813 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
CLCN3-208ENST00000512813 TMEM256-PLSCR3K7ERE1 68 aa3.16□□□□□ -1.9
CLCN3-208ENST00000512813 HIST1H2BKO60814 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BJP06899 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BOP23527 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BBP33778 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BDP58876 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BCP62807 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST2H2BEQ16778 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BHQ93079 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BNQ99877 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BMQ99879 126 aa3.15□□□□□ -1.91
CLCN3-208ENST00000512813 NDUFC1O43677 76 aa3.14□□□□□ -1.91
CLCN3-208ENST00000512813 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
CLCN3-208ENST00000512813 COA6Q5JTJ3 125 aaKnown RBP3.13□□□□□ -1.91
CLCN3-208ENST00000512813 DNAL4O96015 105 aa3.12□□□□□ -1.91
CLCN3-208ENST00000512813 CXCL6P80162 114 aa3.12□□□□□ -1.91
CLCN3-208ENST00000512813 UBE2V1Q13404 147 aa3.12□□□□□ -1.91
CLCN3-208ENST00000512813 HIST3H2BBQ8N257 126 aa3.12□□□□□ -1.91
CLCN3-208ENST00000512813 P0C880 135 aa3.1□□□□□ -1.91
CLCN3-208ENST00000512813 S100A6P06703 90 aa3.09□□□□□ -1.91
CLCN3-208ENST00000512813 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
CLCN3-208ENST00000512813 C9JAW5 83 aa3.08□□□□□ -1.92
CLCN3-208ENST00000512813 PYY3Q5JQD4 70 aa3.08□□□□□ -1.92
CLCN3-208ENST00000512813 C20orf197Q8N268 126 aa3.08□□□□□ -1.92
CLCN3-208ENST00000512813 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
CLCN3-208ENST00000512813 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
CLCN3-208ENST00000512813 PAM16Q9Y3D7 125 aa3.07□□□□□ -1.92
CLCN3-208ENST00000512813 A0A1B0GW54 56 aa3.06□□□□□ -1.92
CLCN3-208ENST00000512813 SMIM6P0DI80 62 aa3.06□□□□□ -1.92
CLCN3-208ENST00000512813 ATOH7Q8N100 152 aa3.06□□□□□ -1.92
CLCN3-208ENST00000512813 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
CLCN3-208ENST00000512813 S100A2P29034 98 aa3.04□□□□□ -1.92
CLCN3-208ENST00000512813 TRIAP1O43715 76 aa3.03□□□□□ -1.92
CLCN3-208ENST00000512813 CASC2Q6XLA1 102 aa3.02□□□□□ -1.93
CLCN3-208ENST00000512813 KRTDAPP60985 99 aa3.01□□□□□ -1.93
CLCN3-208ENST00000512813 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
CLCN3-208ENST00000512813 PCP4L1A6NKN8 68 aa3□□□□□ -1.93
CLCN3-208ENST00000512813 BATFQ16520 125 aa2.99□□□□□ -1.93
CLCN3-208ENST00000512813 NREPQ16612 68 aa2.99□□□□□ -1.93
CLCN3-208ENST00000512813 NAA38Q9BRA0 125 aaKnown RBP2.99□□□□□ -1.93
CLCN3-208ENST00000512813 A0A1W2PPM0 123 aa2.98□□□□□ -1.93
CLCN3-208ENST00000512813 A0A0D9SG42 100 aa2.96□□□□□ -1.94
CLCN3-208ENST00000512813 C14orf144Q96I85 54 aa2.96□□□□□ -1.94
CLCN3-208ENST00000512813 SPATA45Q537H7 98 aa2.95□□□□□ -1.94
CLCN3-208ENST00000512813 CEND1Q8N111 149 aa2.95□□□□□ -1.94
CLCN3-208ENST00000512813 VAMP8Q9BV40 100 aa2.95□□□□□ -1.94
CLCN3-208ENST00000512813 PRO1854Q9UHT4 67 aa2.95□□□□□ -1.94
CLCN3-208ENST00000512813 LOC110117498A0A087WWA1 95 aa2.94□□□□□ -1.94
CLCN3-208ENST00000512813 TSTD3H0UI37 97 aa2.94□□□□□ -1.94
CLCN3-208ENST00000512813 MT-ATP8P03928 68 aa2.94□□□□□ -1.94
CLCN3-208ENST00000512813 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CLCN3-208ENST00000512813 UQCR10Q9UDW1 63 aa2.92□□□□□ -1.94
CLCN3-208ENST00000512813 K7EP34 96 aa2.91□□□□□ -1.94
CLCN3-208ENST00000512813 COX8AP10176 69 aa2.91□□□□□ -1.94
CLCN3-208ENST00000512813 CYP4F30PQ9H0H9 118 aa2.91□□□□□ -1.94
CLCN3-208ENST00000512813 DLEU1O43261 78 aa2.9□□□□□ -1.95
CLCN3-208ENST00000512813 M0R143 59 aa2.89□□□□□ -1.95
CLCN3-208ENST00000512813 Q8N9L7 120 aa2.89□□□□□ -1.95
CLCN3-208ENST00000512813 A0A1B0GV90 55 aa2.88□□□□□ -1.95
CLCN3-208ENST00000512813 HSBP1L1C9JCN9 74 aa2.88□□□□□ -1.95
CLCN3-208ENST00000512813 BPY2O14599 106 aa2.87□□□□□ -1.95
CLCN3-208ENST00000512813 JMJD7-PLA2G4BH0Y9G9 81 aa2.86□□□□□ -1.95
CLCN3-208ENST00000512813 PSMB2P49721 201 aa2.86□□□□□ -1.95
CLCN3-208ENST00000512813 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CLCN3-208ENST00000512813 HIGD1BQ9P298 99 aa2.86□□□□□ -1.95
CLCN3-208ENST00000512813 TAX1BP3O14907 124 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 ACYP1P07311 99 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 COX6CP09669 75 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 BAALC-AS2P0C853 105 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 FXYD2P54710 66 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 HSD52Q0P140 79 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 COL5A1-AS1Q5SY13 56 aa2.85□□□□□ -1.95
CLCN3-208ENST00000512813 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
CLCN3-208ENST00000512813 C14orf132Q9NPU4 83 aa2.82□□□□□ -1.96
CLCN3-208ENST00000512813 K7ERJ3 54 aa2.81□□□□□ -1.96
CLCN3-208ENST00000512813 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
CLCN3-208ENST00000512813 C10orf95Q9H7T3 257 aa2.81□□□□□ -1.96
CLCN3-208ENST00000512813 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CLCN3-208ENST00000512813 TRAV22A0A0B4J277 110 aa2.78□□□□□ -1.96
CLCN3-208ENST00000512813 LOC101927531A0A1B0GV80 90 aa2.77□□□□□ -1.97
CLCN3-208ENST00000512813 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
CLCN3-208ENST00000512813 MT3P25713 68 aa2.75□□□□□ -1.97
CLCN3-208ENST00000512813 PRO0461Q9UI25 63 aa2.75□□□□□ -1.97
CLCN3-208ENST00000512813 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
CLCN3-208ENST00000512813 SPCS1Q9Y6A9 102 aa2.74□□□□□ -1.97
CLCN3-208ENST00000512813 GTF2H5Q6ZYL4 71 aa2.72□□□□□ -1.97
CLCN3-208ENST00000512813 MT1AP04731 61 aa2.71□□□□□ -1.98
CLCN3-208ENST00000512813 F8W1H4 67 aa2.7□□□□□ -1.98
CLCN3-208ENST00000512813 SCGB1C2P0DMR2 95 aa2.68□□□□□ -1.98
CLCN3-208ENST00000512813 ATXN8Q156A1 80 aa2.68□□□□□ -1.98
CLCN3-208ENST00000512813 ETDBQ3ZM63 59 aa2.68□□□□□ -1.98
CLCN3-208ENST00000512813 H3BT86 120 aa2.65□□□□□ -1.99
CLCN3-208ENST00000512813 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CLCN3-208ENST00000512813 K7ERU9 68 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms