RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LSM10Q969L4 123 aaKnown RBP-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 C20orf78Q9BR46 151 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 CCDC167Q9P0B6 97 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 HILPDAQ9Y5L2 63 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 CLTCL1P53675 1640 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 IQGAP2Q13576 1575 aa-0.83□□□□□ -2.54
PDGFC-208ENST00000512711 CRYM-AS1A6NIL9 109 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 ATP6V1G2-DDX39BF2Z307 99 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 RPL38P63173 70 aaKnown RBP-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 SARNPP82979 210 aaKnown RBP-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 HSD52Q0P140 79 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 ACBD7Q8N6N7 88 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 C1orf54Q8WWF1 131 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 C2orf88Q9BSF0 95 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 NMES1Q9C002 83 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 UQCR10Q9UDW1 63 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 Q9Y3F1 56 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 CEP162Q5TB80 1403 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 SAMD9Q5K651 1589 aa-0.84□□□□□ -2.54
PDGFC-208ENST00000512711 TRBV25-1A0A075B6N4 114 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 MIF4GDA9UHW6 222 aaKnown RBP-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 H0Y9P7 68 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 PKIAP61925 76 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 GNGT1P63211 74 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 S100A12P80511 92 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 MROH2BQ7Z745 1585 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 DEFB107AQ8IZN7 70 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 TMEM167AQ8TBQ9 72 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 PPP3R2Q96LZ3 170 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 SNHG12Q9BXW3 62 aa-0.85□□□□□ -2.55
PDGFC-208ENST00000512711 TTC37Q6PGP7 1564 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 NAIPQ13075 1403 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 A0A1B0GWA3 101 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 H3BQ15 152 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 H3BQF6 201 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 UQCRHP07919 91 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 PRCDQ00LT1 54 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 SFTA2Q6UW10 78 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 SMIM5Q71RC9 77 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 ANP32BQ92688 251 aaKnown RBP-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 SPANXDQ9BXN6 97 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 RERGLQ9H628 205 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 AP4S1Q9Y587 144 aa-0.86□□□□□ -2.55
PDGFC-208ENST00000512711 A0A087WXM4 84 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 UQCRHLA0A096LP55 91 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 ATOX1O00244 68 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 PDCD5O14737 125 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 HMGN2P05204 90 aaKnown RBP-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 IGLC2P0DOY2 106 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 IGLC3P0DOY3 106 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 ARPC4P59998 168 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 SMIM21Q3B7S5 101 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 Q56UQ5 140 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 TMEM203Q969S6 136 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 GAFA1Q96PS6 74 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 PFDN5Q99471 154 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 IQGAP3Q86VI3 1631 aa-0.87□□□□□ -2.55
PDGFC-208ENST00000512711 CNTLNQ9NXG0 1405 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 EFCAB5A4FU69 1503 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 IQCF6A8MYZ5 107 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 FAM25AB3EWG3 89 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 FAM25CB3EWG5 89 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 FAM25GB3EWG6 89 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 M0R1W7 72 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 MRPL33O75394 65 aaKnown RBP-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 GYPAP02724 150 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 TRAPPC2P0DI81 140 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 TRAPPC2BP0DI82 140 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 IFI27P40305 119 aaPredicted RBP-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 S100A10P60903 97 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 CATR1Q13166 79 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 MEIG1Q5JSS6 88 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 LINC00308Q8TCZ7 52 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 PYDC1Q8WXC3 89 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 ARL11Q969Q4 196 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 MANBALQ9NQG1 85 aa-0.88□□□□□ -2.55
PDGFC-208ENST00000512711 SNAPC5O75971 98 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 SMIM13P0DJ93 91 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 RBP2P50120 134 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 GNG11P61952 73 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 DR1Q01658 176 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 PLGLAQ15195 96 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 NREPQ16612 68 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 C8orf59Q8N0T1 100 aaPredicted RBP-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 SAMD9LQ8IVG5 1584 aa-0.89□□□□□ -2.55
PDGFC-208ENST00000512711 NAP1L6A6NFF2 107 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 K7EMI3 77 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 APOC2P02655 101 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 RPL13AP3Q6NVV1 102 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 C12orf57Q99622 126 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 CGREF1Q99674 301 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 UBL5Q9BZL1 73 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 TMEM167BQ9NRX6 74 aa-0.9□□□□□ -2.55
PDGFC-208ENST00000512711 NDUFA2O43678 99 aa-0.91□□□□□ -2.56
PDGFC-208ENST00000512711 COX6CP09669 75 aa-0.91□□□□□ -2.56
PDGFC-208ENST00000512711 LINC00032P0C843 101 aa-0.91□□□□□ -2.56
PDGFC-208ENST00000512711 RPL39P62891 51 aaKnown RBP-0.91□□□□□ -2.56
PDGFC-208ENST00000512711 F6UZH7 168 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 H3BVH4 76 aa-0.92□□□□□ -2.56
PDGFC-208ENST00000512711 K7EIM0 57 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms