RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MADDQ8WXG6 1647 aa-0.56□□□□□ -2.5
CHD1-207ENST00000511628 BIRC6Q9NR09 4857 aa-0.57□□□□□ -2.5
CHD1-207ENST00000511628 PLECQ15149 4684 aaKnown RBP-0.57□□□□□ -2.5
CHD1-207ENST00000511628 LAMA3Q16787 3333 aa-0.57□□□□□ -2.5
CHD1-207ENST00000511628 A0A087WWC5 75 aa-0.58□□□□□ -2.5
CHD1-207ENST00000511628 M0R1W7 72 aa-0.58□□□□□ -2.5
CHD1-207ENST00000511628 TIAM1Q13009 1591 aa-0.58□□□□□ -2.5
CHD1-207ENST00000511628 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.59□□□□□ -2.5
CHD1-207ENST00000511628 SMIM27A0A1W2PRY6 76 aa-0.59□□□□□ -2.5
CHD1-207ENST00000511628 SMR3BP02814 79 aaPredicted RBP-0.59□□□□□ -2.5
CHD1-207ENST00000511628 GLI2P10070 1586 aa-0.59□□□□□ -2.5
CHD1-207ENST00000511628 MAST1Q9Y2H9 1570 aa-0.6□□□□□ -2.51
CHD1-207ENST00000511628 EFCAB5A4FU69 1503 aa-0.6□□□□□ -2.51
CHD1-207ENST00000511628 SPTAN1Q13813 2472 aaKnown RBP-0.6□□□□□ -2.51
CHD1-207ENST00000511628 CDC42BPAQ5VT25 1732 aa-0.61□□□□□ -2.51
CHD1-207ENST00000511628 TEX15Q9BXT5 2789 aa-0.61□□□□□ -2.51
CHD1-207ENST00000511628 SPTBN5Q9NRC6 3674 aaKnown RBP-0.61□□□□□ -2.51
CHD1-207ENST00000511628 SRCAPQ6ZRS2 3230 aa-0.61□□□□□ -2.51
CHD1-207ENST00000511628 H0YGX0 51 aa-0.61□□□□□ -2.51
CHD1-207ENST00000511628 LINC00308Q8TCZ7 52 aa-0.61□□□□□ -2.51
CHD1-207ENST00000511628 S100ZQ8WXG8 99 aa-0.61□□□□□ -2.51
CHD1-207ENST00000511628 ITPR2Q14571 2701 aa-0.62□□□□□ -2.51
CHD1-207ENST00000511628 MYO15AQ9UKN7 3530 aa-0.62□□□□□ -2.51
CHD1-207ENST00000511628 ABCA6Q8N139 1617 aa-0.62□□□□□ -2.51
CHD1-207ENST00000511628 MT1EP04732 61 aa-0.62□□□□□ -2.51
CHD1-207ENST00000511628 MT1XP80297 61 aa-0.62□□□□□ -2.51
CHD1-207ENST00000511628 C5orf42Q9H799 3197 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 LRBAP50851 2863 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 IGIPA6NJ69 53 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 MT1HL1P0DM35 61 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 KAAG1Q9UBP8 84 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 CROCC2H7BZ55 1655 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 ITPR1Q14643 2758 aa-0.63□□□□□ -2.51
CHD1-207ENST00000511628 EEA1Q15075 1411 aa-0.64□□□□□ -2.51
CHD1-207ENST00000511628 SPENQ96T58 3664 aaKnown RBP-0.64□□□□□ -2.51
CHD1-207ENST00000511628 SPART-AS1P0CW21 52 aa-0.64□□□□□ -2.51
CHD1-207ENST00000511628 SMIM5Q71RC9 77 aa-0.64□□□□□ -2.51
CHD1-207ENST00000511628 MYO9AB2RTY4 2548 aa-0.65□□□□□ -2.51
CHD1-207ENST00000511628 LINC01546A6NGU7 62 aa-0.65□□□□□ -2.51
CHD1-207ENST00000511628 ADGRG4Q8IZF6 3080 aa-0.66□□□□□ -2.51
CHD1-207ENST00000511628 MT1LQ93083 61 aa-0.66□□□□□ -2.52
CHD1-207ENST00000511628 A0A1B0GUL6 1792 aa-0.67□□□□□ -2.52
CHD1-207ENST00000511628 ALS2Q96Q42 1657 aa-0.67□□□□□ -2.52
CHD1-207ENST00000511628 WFDC10BQ8IUB3 73 aa-0.67□□□□□ -2.52
CHD1-207ENST00000511628 MT1BP07438 61 aa-0.68□□□□□ -2.52
CHD1-207ENST00000511628 DEFB131AP59861 70 aa-0.68□□□□□ -2.52
CHD1-207ENST00000511628 CMYA5Q8N3K9 4069 aa-0.68□□□□□ -2.52
CHD1-207ENST00000511628 PREX2Q70Z35 1606 aa-0.68□□□□□ -2.52
CHD1-207ENST00000511628 DYNC1H1Q14204 4646 aaKnown RBP-0.69□□□□□ -2.52
CHD1-207ENST00000511628 CCDC180Q9P1Z9 1646 aa-0.69□□□□□ -2.52
CHD1-207ENST00000511628 CFAP46Q8IYW2 2715 aa-0.69□□□□□ -2.52
CHD1-207ENST00000511628 ABCA10Q8WWZ4 1543 aa-0.69□□□□□ -2.52
CHD1-207ENST00000511628 CHD7Q9P2D1 2997 aa-0.69□□□□□ -2.52
CHD1-207ENST00000511628 CEP295Q9C0D2 2601 aa-0.69□□□□□ -2.52
CHD1-207ENST00000511628 UGGT1Q9NYU2 1555 aa-0.7□□□□□ -2.52
CHD1-207ENST00000511628 FAM208AQ9UK61 1670 aaKnown RBP-0.7□□□□□ -2.52
CHD1-207ENST00000511628 DNAH17Q9UFH2 4485 aa-0.71□□□□□ -2.52
CHD1-207ENST00000511628 CPS1P31327 1500 aa-0.71□□□□□ -2.52
CHD1-207ENST00000511628 EFCAB6Q5THR3 1501 aa-0.72□□□□□ -2.52
CHD1-207ENST00000511628 PLNP26678 52 aa-0.72□□□□□ -2.52
CHD1-207ENST00000511628 KIF21BO75037 1637 aa-0.72□□□□□ -2.52
CHD1-207ENST00000511628 SMIM31A0A1B0GVY4 71 aa-0.73□□□□□ -2.53
CHD1-207ENST00000511628 EYSQ5T1H1 3165 aa-0.73□□□□□ -2.53
CHD1-207ENST00000511628 MGAQ8IWI9 3026 aa-0.74□□□□□ -2.53
CHD1-207ENST00000511628 DMXL2Q8TDJ6 3036 aa-0.74□□□□□ -2.53
CHD1-207ENST00000511628 DNAH7Q8WXX0 4024 aa-0.74□□□□□ -2.53
CHD1-207ENST00000511628 CSMD1Q96PZ7 3565 aa-0.75□□□□□ -2.53
CHD1-207ENST00000511628 DNAH10Q8IVF4 4471 aa-0.75□□□□□ -2.53
CHD1-207ENST00000511628 TLN1Q9Y490 2541 aaKnown RBP-0.75□□□□□ -2.53
CHD1-207ENST00000511628 PRXQ9BXM0 1461 aa-0.78□□□□□ -2.53
CHD1-207ENST00000511628 POLR2KP53803 58 aaKnown RBP-0.78□□□□□ -2.53
CHD1-207ENST00000511628 SMIM2Q9BVW6 85 aa-0.78□□□□□ -2.53
CHD1-207ENST00000511628 CSMD2Q7Z408 3487 aa-0.78□□□□□ -2.53
CHD1-207ENST00000511628 CMC2Q9NRP2 79 aa-0.79□□□□□ -2.54
CHD1-207ENST00000511628 AGLP35573 1532 aa-0.79□□□□□ -2.54
CHD1-207ENST00000511628 SYCP2Q9BX26 1530 aa-0.79□□□□□ -2.54
CHD1-207ENST00000511628 LMO7Q8WWI1 1683 aa-0.8□□□□□ -2.54
CHD1-207ENST00000511628 MT1MQ8N339 61 aa-0.8□□□□□ -2.54
CHD1-207ENST00000511628 ADCY10Q96PN6 1610 aa-0.8□□□□□ -2.54
CHD1-207ENST00000511628 ABCA5Q8WWZ7 1642 aa-0.81□□□□□ -2.54
CHD1-207ENST00000511628 MT2AP02795 61 aa-0.81□□□□□ -2.54
CHD1-207ENST00000511628 LEAP2Q969E1 77 aa-0.81□□□□□ -2.54
CHD1-207ENST00000511628 CENPEQ02224 2701 aa-0.82□□□□□ -2.54
CHD1-207ENST00000511628 MT1GP13640 62 aa-0.82□□□□□ -2.54
CHD1-207ENST00000511628 TFF3Q07654 80 aa-0.82□□□□□ -2.54
CHD1-207ENST00000511628 DEFB136Q30KP8 78 aa-0.82□□□□□ -2.54
CHD1-207ENST00000511628 MROH2AA6NES4 1674 aa-0.84□□□□□ -2.54
CHD1-207ENST00000511628 DNAH5Q8TE73 4624 aa-0.84□□□□□ -2.54
CHD1-207ENST00000511628 TRPM2O94759 1503 aa-0.84□□□□□ -2.54
CHD1-207ENST00000511628 MT1FP04733 61 aa-0.85□□□□□ -2.55
CHD1-207ENST00000511628 ZFHX4Q86UP3 3567 aa-0.85□□□□□ -2.55
CHD1-207ENST00000511628 TRRAPQ9Y4A5 3859 aa-0.86□□□□□ -2.55
CHD1-207ENST00000511628 ABCC8Q09428 1581 aa-0.86□□□□□ -2.55
CHD1-207ENST00000511628 DEFB4AO15263 64 aa-0.86□□□□□ -2.55
CHD1-207ENST00000511628 LOC400499M0QZD8 3231 aa-0.87□□□□□ -2.55
CHD1-207ENST00000511628 BOD1L1Q8NFC6 3051 aa-0.87□□□□□ -2.55
CHD1-207ENST00000511628 SMG1Q96Q15 3661 aaKnown RBP-0.87□□□□□ -2.55
CHD1-207ENST00000511628 SPEGQ15772 3267 aa-0.88□□□□□ -2.55
CHD1-207ENST00000511628 CFAP54Q96N23 3096 aa-0.88□□□□□ -2.55
CHD1-207ENST00000511628 FANCD2Q9BXW9 1451 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms