RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 IFITM1P13164 125 aa1.16□□□□□ -2.22
TOPBP1-208ENST00000511439 ATP5EP56381 51 aaPredicted RBP1.16□□□□□ -2.22
TOPBP1-208ENST00000511439 Q8IZM0 81 aa1.16□□□□□ -2.22
TOPBP1-208ENST00000511439 Q8N8P6 123 aa1.16□□□□□ -2.22
TOPBP1-208ENST00000511439 PPP1R1CQ8WVI7 109 aa1.16□□□□□ -2.22
TOPBP1-208ENST00000511439 UBE2G1P62253 170 aa1.15□□□□□ -2.23
TOPBP1-208ENST00000511439 IFI27L1Q96BM0 104 aa1.15□□□□□ -2.23
TOPBP1-208ENST00000511439 RPL39LQ96EH5 51 aaKnown RBP1.15□□□□□ -2.23
TOPBP1-208ENST00000511439 SPINK8P0C7L1 97 aa1.14□□□□□ -2.23
TOPBP1-208ENST00000511439 S100A7L2Q5SY68 101 aa1.14□□□□□ -2.23
TOPBP1-208ENST00000511439 TRAV13-2A0A0B4J235 113 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 M0R143 59 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 FCER1GP30273 86 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 SPRR1AP35321 89 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 ALKAL2Q6UX46 152 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 LINC00575Q6W349 94 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 Q6ZQY7 126 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 SPTSSBQ8NFR3 76 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 DSCR8Q96T75 97 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 PRO1933Q9H354 126 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 SCP2D1Q9UJQ7 156 aa1.13□□□□□ -2.23
TOPBP1-208ENST00000511439 LOC101927531A0A1B0GV80 90 aa1.12□□□□□ -2.23
TOPBP1-208ENST00000511439 SSBP1Q04837 148 aaKnown RBP1.12□□□□□ -2.23
TOPBP1-208ENST00000511439 CYP4F30PQ9H0H9 118 aa1.12□□□□□ -2.23
TOPBP1-208ENST00000511439 ST20Q9HBF5 79 aa1.12□□□□□ -2.23
TOPBP1-208ENST00000511439 H0YAA0 97 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 NCR3O14931 201 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 SIX6O95475 246 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 SFT2D2O95562 160 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 KLKP1Q107X0 134 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 WFDC13Q8IUB5 93 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 KCNQ1DNQ9H478 68 aa1.11□□□□□ -2.23
TOPBP1-208ENST00000511439 F2Z2F3 143 aa1.1□□□□□ -2.23
TOPBP1-208ENST00000511439 Q6ZRX8 168 aa1.1□□□□□ -2.23
TOPBP1-208ENST00000511439 TMEM167BQ9NRX6 74 aa1.1□□□□□ -2.23
TOPBP1-208ENST00000511439 HCG22E2RYF7 251 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 MT1GP13640 62 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 SPRR1BP22528 89 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 GCHFRP30047 84 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 H1FX-AS1Q4G0G2 97 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 COL5A1-AS1Q5SY13 56 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 C20orf197Q8N268 126 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 COX7B2Q8TF08 81 aa1.09□□□□□ -2.23
TOPBP1-208ENST00000511439 MT1EP04732 61 aa1.08□□□□□ -2.24
TOPBP1-208ENST00000511439 POLR2KP53803 58 aaKnown RBP1.08□□□□□ -2.24
TOPBP1-208ENST00000511439 CRIPTQ9P021 101 aa1.08□□□□□ -2.24
TOPBP1-208ENST00000511439 SPINK7P58062 85 aa1.07□□□□□ -2.24
TOPBP1-208ENST00000511439 ELOF1P60002 83 aaKnown RBP1.07□□□□□ -2.24
TOPBP1-208ENST00000511439 KRTDAPP60985 99 aa1.07□□□□□ -2.24
TOPBP1-208ENST00000511439 RPL39P62891 51 aaKnown RBP1.07□□□□□ -2.24
TOPBP1-208ENST00000511439 PLAC4Q8WY50 150 aa1.07□□□□□ -2.24
TOPBP1-208ENST00000511439 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
TOPBP1-208ENST00000511439 NAP1L6A6NFF2 107 aa1.06□□□□□ -2.24
TOPBP1-208ENST00000511439 IFI27P40305 119 aaPredicted RBP1.06□□□□□ -2.24
TOPBP1-208ENST00000511439 MT1MQ8N339 61 aa1.06□□□□□ -2.24
TOPBP1-208ENST00000511439 SMIM4Q8WVI0 70 aa1.06□□□□□ -2.24
TOPBP1-208ENST00000511439 AMELXQ99217 191 aa1.06□□□□□ -2.24
TOPBP1-208ENST00000511439 V9GYV3 84 aa1.06□□□□□ -2.24
TOPBP1-208ENST00000511439 D6R8Y8 96 aa1.05□□□□□ -2.24
TOPBP1-208ENST00000511439 MPC2O95563 127 aa1.05□□□□□ -2.24
TOPBP1-208ENST00000511439 FAUP35544 74 aaKnown RBP1.05□□□□□ -2.24
TOPBP1-208ENST00000511439 COX17Q14061 63 aa1.05□□□□□ -2.24
TOPBP1-208ENST00000511439 CNFNQ9BYD5 112 aa1.05□□□□□ -2.24
TOPBP1-208ENST00000511439 A0A1W2PPM0 123 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 PPP1R17O96001 155 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 SEC11AP67812 179 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 KRTAP19-7Q3SYF9 63 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 BAGE2Q86Y30 109 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 C9orf62Q8N4C0 152 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 SNHG12Q9BXW3 62 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 CDKN2A-AS1Q9UH64 79 aa1.04□□□□□ -2.24
TOPBP1-208ENST00000511439 UQCR10Q9UDW1 63 aa1.03□□□□□ -2.24
TOPBP1-208ENST00000511439 Q9H521 79 aa1.02□□□□□ -2.25
TOPBP1-208ENST00000511439 A0A087WXM4 84 aa1.01□□□□□ -2.25
TOPBP1-208ENST00000511439 TRBV7-7A0A0K0K1E9 115 aa1.01□□□□□ -2.25
TOPBP1-208ENST00000511439 ATOX1O00244 68 aa1.01□□□□□ -2.25
TOPBP1-208ENST00000511439 NDUFC1O43677 76 aa1.01□□□□□ -2.25
TOPBP1-208ENST00000511439 DEFB105AQ8NG35 78 aa1.01□□□□□ -2.25
TOPBP1-208ENST00000511439 VAMP8Q9BV40 100 aa1.01□□□□□ -2.25
TOPBP1-208ENST00000511439 PHGR1C9JFL3 82 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 MT-ATP8P03928 68 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 COX6CP09669 75 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 GNGT1P63211 74 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 BAGE3Q86Y29 109 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 FAM213BQ8TBF2 198 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 PRO1854Q9UHT4 67 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 V9GYH0 126 aa1□□□□□ -2.25
TOPBP1-208ENST00000511439 hADV29S1A0JD25 119 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 ZNF815PA8K554 130 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 CHKB-CPT1BH3BT56 60 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 LINC00158P58513 81 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 Q5BKY6 102 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 SFTA2Q6UW10 78 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 PMCHL2Q9BQD1 86 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 C20orf78Q9BR46 151 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 MANBALQ9NQG1 85 aa0.99□□□□□ -2.25
TOPBP1-208ENST00000511439 TRAV22A0A0B4J277 110 aa0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 F8WEM9 126 aa0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 ACYP2P14621 99 aa0.98□□□□□ -2.25
TOPBP1-208ENST00000511439 TMEM170BQ5T4T1 132 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms