RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SPTA1P02549 2419 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 A0A087WTM6 91 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 DEFB130BP0DP73 79 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 DEFB130AP0DP74 79 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 PRLHP81277 87 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 TP53AIP1Q9HCN2 124 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 MYO9AB2RTY4 2548 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 LRRK2Q5S007 2527 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 TPRP12270 2363 aaKnown RBP0.92□□□□□ -2.26
CHD1-206ENST00000511067 PTPN13Q12923 2485 aa0.92□□□□□ -2.26
CHD1-206ENST00000511067 SPTAN1Q13813 2472 aaKnown RBP0.92□□□□□ -2.26
CHD1-206ENST00000511067 DNAH7Q8WXX0 4024 aa0.91□□□□□ -2.26
CHD1-206ENST00000511067 A0A1B0GU69 56 aa0.91□□□□□ -2.26
CHD1-206ENST00000511067 UQCR11O14957 56 aa0.91□□□□□ -2.26
CHD1-206ENST00000511067 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
CHD1-206ENST00000511067 DNAH11Q96DT5 4516 aa0.9□□□□□ -2.26
CHD1-206ENST00000511067 FLNAP21333 2647 aaKnown RBP0.9□□□□□ -2.26
CHD1-206ENST00000511067 NBASA2RRP1 2371 aa0.9□□□□□ -2.27
CHD1-206ENST00000511067 DOPEY1Q5JWR5 2465 aa0.9□□□□□ -2.27
CHD1-206ENST00000511067 USP9YO00507 2555 aaPredicted RBP0.9□□□□□ -2.27
CHD1-206ENST00000511067 DEFB4AO15263 64 aa0.9□□□□□ -2.27
CHD1-206ENST00000511067 MRPL34Q9BQ48 92 aaKnown RBP0.9□□□□□ -2.27
CHD1-206ENST00000511067 HIVEP3Q5T1R4 2406 aa0.9□□□□□ -2.27
CHD1-206ENST00000511067 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
CHD1-206ENST00000511067 CMYA5Q8N3K9 4069 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 ZFYVE26Q68DK2 2539 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 TGP01266 2768 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 POLQO75417 2590 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 SETD2Q9BYW2 2564 aaPredicted RBP0.89□□□□□ -2.27
CHD1-206ENST00000511067 STARD9Q9P2P6 4700 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 A0A096LNI7 61 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 LY6G6CO95867 125 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 DEFB135Q30KP9 77 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 LINC01556Q5JQF7 62 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 HECTD4Q9Y4D8 3996 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 PLECQ15149 4684 aaKnown RBP0.89□□□□□ -2.27
CHD1-206ENST00000511067 SACSQ9NZJ4 4579 aa0.89□□□□□ -2.27
CHD1-206ENST00000511067 SPG11Q96JI7 2443 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 ACACAQ13085 2346 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 ABCA12Q86UK0 2595 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 H3BNG1 76 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 ACYP2P14621 99 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 HTN3P15516 51 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 ITPR2Q14571 2701 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 MAST4O15021 2626 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 TEP1Q99973 2627 aaKnown RBP0.88□□□□□ -2.27
CHD1-206ENST00000511067 NSD1Q96L73 2696 aaPredicted RBP0.88□□□□□ -2.27
CHD1-206ENST00000511067 MYO18BQ8IUG5 2567 aa0.88□□□□□ -2.27
CHD1-206ENST00000511067 CREBBPQ92793 2442 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 RIF1Q5UIP0 2472 aaKnown RBP0.87□□□□□ -2.27
CHD1-206ENST00000511067 TTC28Q96AY4 2481 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 NBDYA0A0U1RRE5 68 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 PKD1P98161 4303 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 FLNBO75369 2602 aaKnown RBP0.87□□□□□ -2.27
CHD1-206ENST00000511067 MTORP42345 2549 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
CHD1-206ENST00000511067 USP24Q9UPU5 2620 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 PKD1L2Q7Z442 2459 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 CCDC168Q8NDH2 2452 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 SPART-AS1P0CW21 52 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 H1FX-AS1Q4G0G2 97 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 LRP1BQ9NZR2 4599 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 FAT2Q9NYQ8 4349 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 NAV2Q8IVL1 2488 aa0.86□□□□□ -2.27
CHD1-206ENST00000511067 TNXBP22105 4242 aa0.85□□□□□ -2.27
CHD1-206ENST00000511067 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
CHD1-206ENST00000511067 SONP18583 2426 aaKnown RBP0.85□□□□□ -2.27
CHD1-206ENST00000511067 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.27
CHD1-206ENST00000511067 HSPG2P98160 4391 aa0.84□□□□□ -2.27
CHD1-206ENST00000511067 CSPG4Q6UVK1 2322 aa0.84□□□□□ -2.28
CHD1-206ENST00000511067 DYNC1H1Q14204 4646 aaKnown RBP0.84□□□□□ -2.28
CHD1-206ENST00000511067 CACNA1AO00555 2505 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 F8P00451 2351 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 STAB2Q8WWQ8 2551 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 LRP1Q07954 4544 aaKnown RBP0.83□□□□□ -2.28
CHD1-206ENST00000511067 ATRQ13535 2644 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
CHD1-206ENST00000511067 SPINK6Q6UWN8 80 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 COX6B2Q6YFQ2 88 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 SSBP3-AS1Q7Z2R9 100 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 PKHD1P08F94 4074 aa0.83□□□□□ -2.28
CHD1-206ENST00000511067 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
CHD1-206ENST00000511067 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
CHD1-206ENST00000511067 SPINK1P00995 79 aa0.82□□□□□ -2.28
CHD1-206ENST00000511067 FAT1Q14517 4588 aa0.82□□□□□ -2.28
CHD1-206ENST00000511067 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
CHD1-206ENST00000511067 FLGP20930 4061 aaPredicted RBP0.81□□□□□ -2.28
CHD1-206ENST00000511067 RPL37P61927 97 aaKnown RBP0.81□□□□□ -2.28
CHD1-206ENST00000511067 DEFB123Q8N688 67 aa0.81□□□□□ -2.28
CHD1-206ENST00000511067 COL6A5A8TX70 2615 aa0.8□□□□□ -2.28
CHD1-206ENST00000511067 S4R3F8 94 aa0.8□□□□□ -2.28
CHD1-206ENST00000511067 ACACBO00763 2458 aa0.79□□□□□ -2.28
CHD1-206ENST00000511067 ACANP16112 2415 aa0.78□□□□□ -2.28
CHD1-206ENST00000511067 HYDINQ4G0P3 5121 aa0.78□□□□□ -2.28
CHD1-206ENST00000511067 FASNP49327 2511 aaKnown RBP0.77□□□□□ -2.29
CHD1-206ENST00000511067 STAB1Q9NY15 2570 aa0.77□□□□□ -2.29
CHD1-206ENST00000511067 SMR3AQ99954 134 aa0.77□□□□□ -2.29
CHD1-206ENST00000511067 APLNQ9ULZ1 77 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms