RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 Q6ZQT0 140 aa2.95□□□□□ -1.94
COL6A4P1-204ENST00000508169 Q6ZSA8 131 aa2.95□□□□□ -1.94
COL6A4P1-204ENST00000508169 TMEM254Q8TBM7 123 aa2.95□□□□□ -1.94
COL6A4P1-204ENST00000508169 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
COL6A4P1-204ENST00000508169 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
COL6A4P1-204ENST00000508169 C14orf132Q9NPU4 83 aa2.94□□□□□ -1.94
COL6A4P1-204ENST00000508169 ALMS1Q8TCU4 4167 aa2.94□□□□□ -1.94
COL6A4P1-204ENST00000508169 LCE6AA0A183 80 aa2.93□□□□□ -1.94
COL6A4P1-204ENST00000508169 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
COL6A4P1-204ENST00000508169 HECTD4Q9Y4D8 3996 aa2.92□□□□□ -1.94
COL6A4P1-204ENST00000508169 ROMO1P60602 79 aa2.92□□□□□ -1.94
COL6A4P1-204ENST00000508169 SPRR4Q96PI1 79 aa2.92□□□□□ -1.94
COL6A4P1-204ENST00000508169 LINC00846Q9NV44 126 aa2.92□□□□□ -1.94
COL6A4P1-204ENST00000508169 NREPQ16612 68 aa2.91□□□□□ -1.94
COL6A4P1-204ENST00000508169 UBL5Q9BZL1 73 aa2.91□□□□□ -1.94
COL6A4P1-204ENST00000508169 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
COL6A4P1-204ENST00000508169 FAT2Q9NYQ8 4349 aa2.89□□□□□ -1.95
COL6A4P1-204ENST00000508169 PRLHP81277 87 aa2.89□□□□□ -1.95
COL6A4P1-204ENST00000508169 C1orf137Q5JT78 98 aa2.89□□□□□ -1.95
COL6A4P1-204ENST00000508169 PSORS1C2Q9UIG4 136 aa2.89□□□□□ -1.95
COL6A4P1-204ENST00000508169 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
COL6A4P1-204ENST00000508169 DEFB105AQ8NG35 78 aa2.88□□□□□ -1.95
COL6A4P1-204ENST00000508169 FRAS1Q86XX4 4008 aa2.88□□□□□ -1.95
COL6A4P1-204ENST00000508169 PKD1P98161 4303 aa2.87□□□□□ -1.95
COL6A4P1-204ENST00000508169 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
COL6A4P1-204ENST00000508169 DNAH8Q96JB1 4490 aa2.87□□□□□ -1.95
COL6A4P1-204ENST00000508169 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
COL6A4P1-204ENST00000508169 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
COL6A4P1-204ENST00000508169 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
COL6A4P1-204ENST00000508169 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
COL6A4P1-204ENST00000508169 NDUFB1O75438 58 aa2.85□□□□□ -1.95
COL6A4P1-204ENST00000508169 CSAG1Q6PB30 78 aa2.84□□□□□ -1.95
COL6A4P1-204ENST00000508169 DNAH5Q8TE73 4624 aa2.84□□□□□ -1.95
COL6A4P1-204ENST00000508169 HYDINQ4G0P3 5121 aa2.83□□□□□ -1.96
COL6A4P1-204ENST00000508169 SPAG11AQ6PDA7 123 aa2.83□□□□□ -1.96
COL6A4P1-204ENST00000508169 SPINK6Q6UWN8 80 aa2.83□□□□□ -1.96
COL6A4P1-204ENST00000508169 LINC00472Q9H8W2 130 aa2.83□□□□□ -1.96
COL6A4P1-204ENST00000508169 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
COL6A4P1-204ENST00000508169 H3BPC8 53 aa2.82□□□□□ -1.96
COL6A4P1-204ENST00000508169 HAMPP81172 84 aa2.82□□□□□ -1.96
COL6A4P1-204ENST00000508169 LINC00208Q96KT6 92 aa2.81□□□□□ -1.96
COL6A4P1-204ENST00000508169 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
COL6A4P1-204ENST00000508169 A0A087WSZ3 146 aa2.8□□□□□ -1.96
COL6A4P1-204ENST00000508169 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
COL6A4P1-204ENST00000508169 LINC01558Q9Y6Z2 57 aa2.8□□□□□ -1.96
COL6A4P1-204ENST00000508169 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
COL6A4P1-204ENST00000508169 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
COL6A4P1-204ENST00000508169 Q96NJ1 140 aa2.78□□□□□ -1.96
COL6A4P1-204ENST00000508169 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.97
COL6A4P1-204ENST00000508169 SPINK1P00995 79 aa2.77□□□□□ -1.97
COL6A4P1-204ENST00000508169 RYR2Q92736 4967 aa2.77□□□□□ -1.97
COL6A4P1-204ENST00000508169 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
COL6A4P1-204ENST00000508169 H0Y9P7 68 aa2.76□□□□□ -1.97
COL6A4P1-204ENST00000508169 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
COL6A4P1-204ENST00000508169 K7EQZ3 153 aa2.75□□□□□ -1.97
COL6A4P1-204ENST00000508169 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
COL6A4P1-204ENST00000508169 SPINK7P58062 85 aa2.74□□□□□ -1.97
COL6A4P1-204ENST00000508169 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
COL6A4P1-204ENST00000508169 TP53AIP1Q9HCN2 124 aa2.73□□□□□ -1.97
COL6A4P1-204ENST00000508169 UQCR11O14957 56 aa2.72□□□□□ -1.97
COL6A4P1-204ENST00000508169 MMP24-AS1A0A0U1RRL7 71 aa2.71□□□□□ -1.98
COL6A4P1-204ENST00000508169 SMR3BP02814 79 aaPredicted RBP2.71□□□□□ -1.98
COL6A4P1-204ENST00000508169 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
COL6A4P1-204ENST00000508169 FAT1Q14517 4588 aa2.7□□□□□ -1.98
COL6A4P1-204ENST00000508169 COA5Q86WW8 74 aa2.7□□□□□ -1.98
COL6A4P1-204ENST00000508169 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
COL6A4P1-204ENST00000508169 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
COL6A4P1-204ENST00000508169 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
COL6A4P1-204ENST00000508169 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
COL6A4P1-204ENST00000508169 FLG2Q5D862 2391 aaPredicted RBP2.68□□□□□ -1.98
COL6A4P1-204ENST00000508169 HSPG2P98160 4391 aa2.68□□□□□ -1.98
COL6A4P1-204ENST00000508169 Q5VSD8 79 aa2.67□□□□□ -1.98
COL6A4P1-204ENST00000508169 RYR3Q15413 4870 aa2.67□□□□□ -1.98
COL6A4P1-204ENST00000508169 DMBT1Q9UGM3 2413 aaPredicted RBP2.67□□□□□ -1.98
COL6A4P1-204ENST00000508169 WFDC13Q8IUB5 93 aa2.66□□□□□ -1.98
COL6A4P1-204ENST00000508169 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
COL6A4P1-204ENST00000508169 PCOTHQ58A44 107 aa2.65□□□□□ -1.99
COL6A4P1-204ENST00000508169 RYR1P21817 5038 aa2.63□□□□□ -1.99
COL6A4P1-204ENST00000508169 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
COL6A4P1-204ENST00000508169 TNXBP22105 4242 aa2.62□□□□□ -1.99
COL6A4P1-204ENST00000508169 KIAA1109Q2LD37 5005 aa2.62□□□□□ -1.99
COL6A4P1-204ENST00000508169 A0A1B0GU69 56 aa2.61□□□□□ -1.99
COL6A4P1-204ENST00000508169 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
COL6A4P1-204ENST00000508169 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
COL6A4P1-204ENST00000508169 LRP1Q07954 4544 aaKnown RBP2.58□□□□□ -2
COL6A4P1-204ENST00000508169 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
COL6A4P1-204ENST00000508169 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
COL6A4P1-204ENST00000508169 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
COL6A4P1-204ENST00000508169 FAT3Q8TDW7 4589 aa2.57□□□□□ -2
COL6A4P1-204ENST00000508169 MYCBP2O75592 4640 aa2.54□□□□□ -2
COL6A4P1-204ENST00000508169 RPL37P61927 97 aaKnown RBP2.53□□□□□ -2
COL6A4P1-204ENST00000508169 ACYP2P14621 99 aa2.52□□□□□ -2.01
COL6A4P1-204ENST00000508169 C9orf92A6NGG3 77 aa2.51□□□□□ -2.01
COL6A4P1-204ENST00000508169 HERC2O95714 4834 aa2.48□□□□□ -2.01
COL6A4P1-204ENST00000508169 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
COL6A4P1-204ENST00000508169 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
COL6A4P1-204ENST00000508169 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
COL6A4P1-204ENST00000508169 LRP2P98164 4655 aa2.42□□□□□ -2.02
COL6A4P1-204ENST00000508169 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
COL6A4P1-204ENST00000508169 CRIPTQ9P021 101 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms