RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 PRKDCP78527 4128 aaKnown RBP1.05□□□□□ -2.24
TRAPPC13-205ENST00000504243 CACNA1HO95180 2353 aa1.05□□□□□ -2.24
TRAPPC13-205ENST00000504243 SPRR1BP22528 89 aa1.04□□□□□ -2.24
TRAPPC13-205ENST00000504243 DEFB131AP59861 70 aa1.04□□□□□ -2.24
TRAPPC13-205ENST00000504243 MGAQ8IWI9 3026 aa1.04□□□□□ -2.24
TRAPPC13-205ENST00000504243 SONP18583 2426 aaKnown RBP1.04□□□□□ -2.24
TRAPPC13-205ENST00000504243 PKDREJQ9NTG1 2253 aa1.03□□□□□ -2.24
TRAPPC13-205ENST00000504243 DEFB130BP0DP73 79 aa1.03□□□□□ -2.24
TRAPPC13-205ENST00000504243 DEFB130AP0DP74 79 aa1.03□□□□□ -2.24
TRAPPC13-205ENST00000504243 RPS27P42677 84 aaKnown RBP1.03□□□□□ -2.24
TRAPPC13-205ENST00000504243 RPS27LQ71UM5 84 aaKnown RBP1.03□□□□□ -2.24
TRAPPC13-205ENST00000504243 WFDC10BQ8IUB3 73 aa1.03□□□□□ -2.24
TRAPPC13-205ENST00000504243 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.25
TRAPPC13-205ENST00000504243 USF3Q68DE3 2245 aa1.03□□□□□ -2.25
TRAPPC13-205ENST00000504243 ACANP16112 2415 aa1.03□□□□□ -2.25
TRAPPC13-205ENST00000504243 DNAH7Q8WXX0 4024 aa1.02□□□□□ -2.25
TRAPPC13-205ENST00000504243 WT1-ASQ06250 92 aa1.02□□□□□ -2.25
TRAPPC13-205ENST00000504243 CHD9Q3L8U1 2897 aa1.02□□□□□ -2.25
TRAPPC13-205ENST00000504243 CSPG4Q6UVK1 2322 aa1.01□□□□□ -2.25
TRAPPC13-205ENST00000504243 DYNC2H1Q8NCM8 4307 aaKnown RBP1.01□□□□□ -2.25
TRAPPC13-205ENST00000504243 IGLV5-48A0A075B6I7 105 aa1.01□□□□□ -2.25
TRAPPC13-205ENST00000504243 A0A0D9SG42 100 aa1.01□□□□□ -2.25
TRAPPC13-205ENST00000504243 KMT2DO14686 5537 aa1□□□□□ -2.25
TRAPPC13-205ENST00000504243 SACSQ9NZJ4 4579 aa0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 POLR2KP53803 58 aaKnown RBP0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 DEFB109BQ30KR1 87 aa0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 LELP1Q5T871 98 aa0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 NOP10Q9NPE3 64 aaKnown RBP0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 KAAG1Q9UBP8 84 aa0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 ZNF469Q96JG9 3925 aaPredicted RBP0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 MDN1Q9NU22 5596 aa0.99□□□□□ -2.25
TRAPPC13-205ENST00000504243 NBASA2RRP1 2371 aa0.98□□□□□ -2.25
TRAPPC13-205ENST00000504243 APC2O95996 2303 aa0.98□□□□□ -2.25
TRAPPC13-205ENST00000504243 KRTAP20-1Q3LI63 56 aa0.98□□□□□ -2.25
TRAPPC13-205ENST00000504243 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
TRAPPC13-205ENST00000504243 DNAH1Q9P2D7 4330 aa0.98□□□□□ -2.25
TRAPPC13-205ENST00000504243 LAMA1P25391 3075 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 KNL1Q8NG31 2342 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 KLK9Q2XQG4 91 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 ARHGAP5-AS1Q96IT6 56 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 COL7A1Q02388 2944 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 CMYA5Q8N3K9 4069 aa0.97□□□□□ -2.25
TRAPPC13-205ENST00000504243 FAT3Q8TDW7 4589 aa0.96□□□□□ -2.26
TRAPPC13-205ENST00000504243 PRLHP81277 87 aa0.96□□□□□ -2.26
TRAPPC13-205ENST00000504243 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
TRAPPC13-205ENST00000504243 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
TRAPPC13-205ENST00000504243 FRAS1Q86XX4 4008 aa0.95□□□□□ -2.26
TRAPPC13-205ENST00000504243 SPTBN1Q01082 2364 aaKnown RBP0.95□□□□□ -2.26
TRAPPC13-205ENST00000504243 S4R3F8 94 aa0.94□□□□□ -2.26
TRAPPC13-205ENST00000504243 CSMD3Q7Z407 3707 aa0.94□□□□□ -2.26
TRAPPC13-205ENST00000504243 TRRAPQ9Y4A5 3859 aa0.94□□□□□ -2.26
TRAPPC13-205ENST00000504243 MUC12Q9UKN1 5478 aa0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 MMP24-AS1A0A0U1RRL7 71 aa0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 DEFB106AQ8N104 65 aa0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 TACC2O95359 2948 aa0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 PKHD1P08F94 4074 aa0.93□□□□□ -2.26
TRAPPC13-205ENST00000504243 ALMS1Q8TCU4 4167 aa0.92□□□□□ -2.26
TRAPPC13-205ENST00000504243 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
TRAPPC13-205ENST00000504243 H0YGG7 62 aa0.92□□□□□ -2.26
TRAPPC13-205ENST00000504243 LRP1BQ9NZR2 4599 aa0.91□□□□□ -2.26
TRAPPC13-205ENST00000504243 RPL39LQ96EH5 51 aaKnown RBP0.91□□□□□ -2.26
TRAPPC13-205ENST00000504243 LYSTQ99698 3801 aa0.91□□□□□ -2.26
TRAPPC13-205ENST00000504243 PKD1P98161 4303 aa0.9□□□□□ -2.27
TRAPPC13-205ENST00000504243 A8MTW9 85 aa0.9□□□□□ -2.27
TRAPPC13-205ENST00000504243 DYNC1H1Q14204 4646 aaKnown RBP0.9□□□□□ -2.27
TRAPPC13-205ENST00000504243 DNAH9Q9NYC9 4486 aa0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 M0QY20 66 aa0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 PRCDQ00LT1 54 aa0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 LINC01590Q5TEZ4 76 aa0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 SPINK6Q6UWN8 80 aa0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 PLECQ15149 4684 aaKnown RBP0.88□□□□□ -2.27
TRAPPC13-205ENST00000504243 TTTY10Q9BZA0 68 aa0.87□□□□□ -2.27
TRAPPC13-205ENST00000504243 USH2AO75445 5202 aa0.87□□□□□ -2.27
TRAPPC13-205ENST00000504243 SPINK1P00995 79 aa0.86□□□□□ -2.27
TRAPPC13-205ENST00000504243 TOMM7Q9P0U1 55 aa0.86□□□□□ -2.27
TRAPPC13-205ENST00000504243 LRP1Q07954 4544 aaKnown RBP0.86□□□□□ -2.27
TRAPPC13-205ENST00000504243 AKAP6Q13023 2319 aa0.86□□□□□ -2.27
TRAPPC13-205ENST00000504243 HSPG2P98160 4391 aa0.85□□□□□ -2.27
TRAPPC13-205ENST00000504243 ANK3Q12955 4377 aaKnown RBP0.85□□□□□ -2.27
TRAPPC13-205ENST00000504243 CLPSL2Q6UWE3 100 aa0.85□□□□□ -2.27
TRAPPC13-205ENST00000504243 LEAP2Q969E1 77 aa0.85□□□□□ -2.27
TRAPPC13-205ENST00000504243 FAT2Q9NYQ8 4349 aa0.84□□□□□ -2.27
TRAPPC13-205ENST00000504243 M0QZ58 72 aa0.84□□□□□ -2.27
TRAPPC13-205ENST00000504243 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
TRAPPC13-205ENST00000504243 M0R2T5 61 aa0.82□□□□□ -2.28
TRAPPC13-205ENST00000504243 LRP2P98164 4655 aa0.82□□□□□ -2.28
TRAPPC13-205ENST00000504243 PKHD1L1Q86WI1 4243 aa0.81□□□□□ -2.28
TRAPPC13-205ENST00000504243 FAT1Q14517 4588 aa0.81□□□□□ -2.28
TRAPPC13-205ENST00000504243 H3BSH0 61 aa0.81□□□□□ -2.28
TRAPPC13-205ENST00000504243 DNAH6Q9C0G6 4158 aa0.81□□□□□ -2.28
TRAPPC13-205ENST00000504243 K7EIM0 57 aa0.8□□□□□ -2.28
TRAPPC13-205ENST00000504243 APOBP04114 4563 aaKnown RBP0.8□□□□□ -2.28
TRAPPC13-205ENST00000504243 ACACAQ13085 2346 aa0.8□□□□□ -2.28
TRAPPC13-205ENST00000504243 C9orf92A6NGG3 77 aa0.79□□□□□ -2.28
TRAPPC13-205ENST00000504243 U3KQA8 63 aa0.79□□□□□ -2.28
TRAPPC13-205ENST00000504243 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms