RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 KCNQ1DNQ9H478 68 aa2.16□□□□□ -2.06
SCLT1-206ENST00000503565 APLNQ9ULZ1 77 aa2.16□□□□□ -2.06
SCLT1-206ENST00000503565 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.15□□□□□ -2.07
SCLT1-206ENST00000503565 A0A096LPF7 62 aa2.15□□□□□ -2.07
SCLT1-206ENST00000503565 TRBV6-4A0A1B0GX49 114 aa2.15□□□□□ -2.07
SCLT1-206ENST00000503565 KIAA1109Q2LD37 5005 aa2.15□□□□□ -2.07
SCLT1-206ENST00000503565 ALMS1Q8TCU4 4167 aa2.14□□□□□ -2.07
SCLT1-206ENST00000503565 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
SCLT1-206ENST00000503565 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
SCLT1-206ENST00000503565 M0R2N4 97 aa2.13□□□□□ -2.07
SCLT1-206ENST00000503565 A0A087WTM6 91 aa2.12□□□□□ -2.07
SCLT1-206ENST00000503565 M0QY20 66 aa2.12□□□□□ -2.07
SCLT1-206ENST00000503565 COX7BP24311 80 aa2.12□□□□□ -2.07
SCLT1-206ENST00000503565 HECTD4Q9Y4D8 3996 aa2.12□□□□□ -2.07
SCLT1-206ENST00000503565 NBDYA0A0U1RRE5 68 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 A0A1B0GU69 56 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 LINC00158P58513 81 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 LELP1Q5T871 98 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 WFDC10BQ8IUB3 73 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 DEFB104AQ8WTQ1 72 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 RPL39LQ96EH5 51 aaKnown RBP2.11□□□□□ -2.07
SCLT1-206ENST00000503565 LINC00472Q9H8W2 130 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 DNAH10Q8IVF4 4471 aa2.11□□□□□ -2.07
SCLT1-206ENST00000503565 POLR2KP53803 58 aaKnown RBP2.1□□□□□ -2.07
SCLT1-206ENST00000503565 COX17Q14061 63 aa2.1□□□□□ -2.07
SCLT1-206ENST00000503565 LINC01556Q5JQF7 62 aa2.1□□□□□ -2.07
SCLT1-206ENST00000503565 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
SCLT1-206ENST00000503565 PKHD1P08F94 4074 aa2.1□□□□□ -2.07
SCLT1-206ENST00000503565 ANGP03950 147 aaKnown RBP2.09□□□□□ -2.07
SCLT1-206ENST00000503565 RPL39P62891 51 aaKnown RBP2.09□□□□□ -2.07
SCLT1-206ENST00000503565 DNAH6Q9C0G6 4158 aa2.08□□□□□ -2.08
SCLT1-206ENST00000503565 KRTAP13-4Q3LI77 160 aa2.08□□□□□ -2.08
SCLT1-206ENST00000503565 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
SCLT1-206ENST00000503565 DNAH11Q96DT5 4516 aa2.07□□□□□ -2.08
SCLT1-206ENST00000503565 VPS13DQ5THJ4 4388 aa2.07□□□□□ -2.08
SCLT1-206ENST00000503565 CLPSL2Q6UWE3 100 aa2.07□□□□□ -2.08
SCLT1-206ENST00000503565 Q6ZQY7 126 aa2.07□□□□□ -2.08
SCLT1-206ENST00000503565 Q96NJ1 140 aa2.07□□□□□ -2.08
SCLT1-206ENST00000503565 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
SCLT1-206ENST00000503565 RPL37AP61513 92 aaKnown RBP2.06□□□□□ -2.08
SCLT1-206ENST00000503565 KRTAP13-1Q8IUC0 172 aa2.06□□□□□ -2.08
SCLT1-206ENST00000503565 FAT2Q9NYQ8 4349 aa2.06□□□□□ -2.08
SCLT1-206ENST00000503565 HERC1Q15751 4861 aa2.06□□□□□ -2.08
SCLT1-206ENST00000503565 DMBT1Q9UGM3 2413 aaPredicted RBP2.05□□□□□ -2.08
SCLT1-206ENST00000503565 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
SCLT1-206ENST00000503565 LINC00575Q6W349 94 aa2.05□□□□□ -2.08
SCLT1-206ENST00000503565 HSPG2P98160 4391 aa2.05□□□□□ -2.08
SCLT1-206ENST00000503565 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
SCLT1-206ENST00000503565 KRTAP12-1P59990 96 aa2.04□□□□□ -2.08
SCLT1-206ENST00000503565 Q8IZM0 81 aa2.04□□□□□ -2.08
SCLT1-206ENST00000503565 CDKN2A-AS1Q9UH64 79 aa2.04□□□□□ -2.08
SCLT1-206ENST00000503565 DNAH17Q9UFH2 4485 aa2.03□□□□□ -2.08
SCLT1-206ENST00000503565 ACYP2P14621 99 aa2.03□□□□□ -2.08
SCLT1-206ENST00000503565 LRP1BQ9NZR2 4599 aa2.02□□□□□ -2.09
SCLT1-206ENST00000503565 GVQW2A0A096LPI5 108 aaPredicted RBP2.01□□□□□ -2.09
SCLT1-206ENST00000503565 COX6A2Q02221 97 aa2.01□□□□□ -2.09
SCLT1-206ENST00000503565 SSBP3-AS1Q7Z2R9 100 aa2.01□□□□□ -2.09
SCLT1-206ENST00000503565 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
SCLT1-206ENST00000503565 PKD1P98161 4303 aa2□□□□□ -2.09
SCLT1-206ENST00000503565 UBR4Q5T4S7 5183 aa1.99□□□□□ -2.09
SCLT1-206ENST00000503565 K7EQZ3 153 aa1.99□□□□□ -2.09
SCLT1-206ENST00000503565 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
SCLT1-206ENST00000503565 UNQ6190/PRO20217Q6UXQ8 127 aa1.99□□□□□ -2.09
SCLT1-206ENST00000503565 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
SCLT1-206ENST00000503565 DNAH5Q8TE73 4624 aa1.99□□□□□ -2.09
SCLT1-206ENST00000503565 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
SCLT1-206ENST00000503565 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
SCLT1-206ENST00000503565 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
SCLT1-206ENST00000503565 FLG2Q5D862 2391 aaPredicted RBP1.97□□□□□ -2.09
SCLT1-206ENST00000503565 A0A096LNI7 61 aa1.97□□□□□ -2.09
SCLT1-206ENST00000503565 C6orf48Q9UBA6 75 aa1.97□□□□□ -2.09
SCLT1-206ENST00000503565 SRRM2Q9UQ35 2752 aaKnown RBP1.97□□□□□ -2.09
SCLT1-206ENST00000503565 Q6ZSA8 131 aa1.96□□□□□ -2.1
SCLT1-206ENST00000503565 WFDC13Q8IUB5 93 aa1.96□□□□□ -2.1
SCLT1-206ENST00000503565 FAT1Q14517 4588 aa1.95□□□□□ -2.1
SCLT1-206ENST00000503565 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
SCLT1-206ENST00000503565 Q5VSD8 79 aa1.94□□□□□ -2.1
SCLT1-206ENST00000503565 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
SCLT1-206ENST00000503565 HMCN2Q8NDA2 5059 aa1.94□□□□□ -2.1
SCLT1-206ENST00000503565 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SCLT1-206ENST00000503565 VPS13BQ7Z7G8 4022 aa1.93□□□□□ -2.1
SCLT1-206ENST00000503565 IGLV5-48A0A075B6I7 105 aa1.93□□□□□ -2.1
SCLT1-206ENST00000503565 Q6ZRX8 168 aa1.93□□□□□ -2.1
SCLT1-206ENST00000503565 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
SCLT1-206ENST00000503565 SPINK6Q6UWN8 80 aa1.9□□□□□ -2.11
SCLT1-206ENST00000503565 INE1O15225 51 aa1.89□□□□□ -2.11
SCLT1-206ENST00000503565 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
SCLT1-206ENST00000503565 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
SCLT1-206ENST00000503565 RNF213Q63HN8 5207 aa1.88□□□□□ -2.11
SCLT1-206ENST00000503565 H0YAA0 97 aa1.87□□□□□ -2.11
SCLT1-206ENST00000503565 PRLHP81277 87 aa1.87□□□□□ -2.11
SCLT1-206ENST00000503565 LRP2P98164 4655 aa1.86□□□□□ -2.11
SCLT1-206ENST00000503565 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
SCLT1-206ENST00000503565 MMP24-AS1A0A0U1RRL7 71 aa1.86□□□□□ -2.11
SCLT1-206ENST00000503565 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
SCLT1-206ENST00000503565 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
SCLT1-206ENST00000503565 SPRR1AP35321 89 aa1.85□□□□□ -2.11
SCLT1-206ENST00000503565 MRPL34Q9BQ48 92 aaKnown RBP1.85□□□□□ -2.11
SCLT1-206ENST00000503565 DNAH8Q96JB1 4490 aa1.85□□□□□ -2.11
SCLT1-206ENST00000503565 DEFB105AQ8NG35 78 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms