RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 PLECQ15149 4684 aaKnown RBP5.38□□□□□ -1.55
RC3H2-210ENST00000498479 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
RC3H2-210ENST00000498479 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
RC3H2-210ENST00000498479 VPS13DQ5THJ4 4388 aa5.34□□□□□ -1.55
RC3H2-210ENST00000498479 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
RC3H2-210ENST00000498479 INE1O15225 51 aa5.31□□□□□ -1.56
RC3H2-210ENST00000498479 DNAH8Q96JB1 4490 aa5.31□□□□□ -1.56
RC3H2-210ENST00000498479 DNAH11Q96DT5 4516 aa5.27□□□□□ -1.57
RC3H2-210ENST00000498479 DNAH5Q8TE73 4624 aa5.23□□□□□ -1.57
RC3H2-210ENST00000498479 DNAH2Q9P225 4427 aa5.23□□□□□ -1.57
RC3H2-210ENST00000498479 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
RC3H2-210ENST00000498479 STARD9Q9P2P6 4700 aa5.14□□□□□ -1.59
RC3H2-210ENST00000498479 LRP1BQ9NZR2 4599 aa5.11□□□□□ -1.59
RC3H2-210ENST00000498479 SACSQ9NZJ4 4579 aa5.09□□□□□ -1.6
RC3H2-210ENST00000498479 DYNC2H1Q8NCM8 4307 aaKnown RBP5.08□□□□□ -1.6
RC3H2-210ENST00000498479 ANK2Q01484 3957 aa5.08□□□□□ -1.6
RC3H2-210ENST00000498479 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
RC3H2-210ENST00000498479 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
RC3H2-210ENST00000498479 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
RC3H2-210ENST00000498479 KRTAP12-3P60328 96 aa5□□□□□ -1.61
RC3H2-210ENST00000498479 FRAS1Q86XX4 4008 aa4.99□□□□□ -1.61
RC3H2-210ENST00000498479 HECTD4Q9Y4D8 3996 aa4.98□□□□□ -1.61
RC3H2-210ENST00000498479 CMYA5Q8N3K9 4069 aa4.98□□□□□ -1.61
RC3H2-210ENST00000498479 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
RC3H2-210ENST00000498479 KMT2AQ03164 3969 aa4.96□□□□□ -1.62
RC3H2-210ENST00000498479 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
RC3H2-210ENST00000498479 FAT1Q14517 4588 aa4.94□□□□□ -1.62
RC3H2-210ENST00000498479 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
RC3H2-210ENST00000498479 DNAH6Q9C0G6 4158 aa4.91□□□□□ -1.62
RC3H2-210ENST00000498479 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.62
RC3H2-210ENST00000498479 LYSTQ99698 3801 aa4.87□□□□□ -1.63
RC3H2-210ENST00000498479 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
RC3H2-210ENST00000498479 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
RC3H2-210ENST00000498479 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
RC3H2-210ENST00000498479 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
RC3H2-210ENST00000498479 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
RC3H2-210ENST00000498479 FAT3Q8TDW7 4589 aa4.74□□□□□ -1.65
RC3H2-210ENST00000498479 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
RC3H2-210ENST00000498479 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
RC3H2-210ENST00000498479 MYCBP2O75592 4640 aa4.67□□□□□ -1.66
RC3H2-210ENST00000498479 RYR1P21817 5038 aa4.63□□□□□ -1.67
RC3H2-210ENST00000498479 MT2AP02795 61 aa4.62□□□□□ -1.67
RC3H2-210ENST00000498479 MT1HP80294 61 aa4.61□□□□□ -1.67
RC3H2-210ENST00000498479 LRP1Q07954 4544 aaKnown RBP4.59□□□□□ -1.67
RC3H2-210ENST00000498479 PKHD1L1Q86WI1 4243 aa4.56□□□□□ -1.68
RC3H2-210ENST00000498479 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
RC3H2-210ENST00000498479 MT1FP04733 61 aa4.55□□□□□ -1.68
RC3H2-210ENST00000498479 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
RC3H2-210ENST00000498479 RYR2Q92736 4967 aa4.53□□□□□ -1.68
RC3H2-210ENST00000498479 PKD1P98161 4303 aa4.53□□□□□ -1.68
RC3H2-210ENST00000498479 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
RC3H2-210ENST00000498479 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
RC3H2-210ENST00000498479 KRTAP19-8Q3LI54 63 aa4.49□□□□□ -1.69
RC3H2-210ENST00000498479 RYR3Q15413 4870 aa4.48□□□□□ -1.69
RC3H2-210ENST00000498479 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
RC3H2-210ENST00000498479 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
RC3H2-210ENST00000498479 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
RC3H2-210ENST00000498479 KIAA1109Q2LD37 5005 aa4.45□□□□□ -1.7
RC3H2-210ENST00000498479 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
RC3H2-210ENST00000498479 LRP2P98164 4655 aa4.43□□□□□ -1.7
RC3H2-210ENST00000498479 HSPG2P98160 4391 aa4.39□□□□□ -1.71
RC3H2-210ENST00000498479 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
RC3H2-210ENST00000498479 MT1XP80297 61 aa4.38□□□□□ -1.71
RC3H2-210ENST00000498479 TNXBP22105 4242 aa4.38□□□□□ -1.71
RC3H2-210ENST00000498479 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
RC3H2-210ENST00000498479 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
RC3H2-210ENST00000498479 MT1BP07438 61 aa4.31□□□□□ -1.72
RC3H2-210ENST00000498479 KMT2CQ8NEZ4 4911 aaKnown RBP4.28□□□□□ -1.72
RC3H2-210ENST00000498479 LCE2CQ5TA81 110 aa4.28□□□□□ -1.72
RC3H2-210ENST00000498479 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
RC3H2-210ENST00000498479 LPAP08519 4548 aa4.21□□□□□ -1.74
RC3H2-210ENST00000498479 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
RC3H2-210ENST00000498479 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
RC3H2-210ENST00000498479 HERC1Q15751 4861 aa4.17□□□□□ -1.74
RC3H2-210ENST00000498479 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
RC3H2-210ENST00000498479 HERC2O95714 4834 aa4.11□□□□□ -1.75
RC3H2-210ENST00000498479 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
RC3H2-210ENST00000498479 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
RC3H2-210ENST00000498479 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
RC3H2-210ENST00000498479 BIRC6Q9NR09 4857 aa3.94□□□□□ -1.78
RC3H2-210ENST00000498479 MT1GP13640 62 aa3.94□□□□□ -1.78
RC3H2-210ENST00000498479 MT1LQ93083 61 aa3.93□□□□□ -1.78
RC3H2-210ENST00000498479 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
RC3H2-210ENST00000498479 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.78
RC3H2-210ENST00000498479 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
RC3H2-210ENST00000498479 MT1EP04732 61 aa3.88□□□□□ -1.79
RC3H2-210ENST00000498479 LCE2BO14633 110 aa3.87□□□□□ -1.79
RC3H2-210ENST00000498479 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
RC3H2-210ENST00000498479 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
RC3H2-210ENST00000498479 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
RC3H2-210ENST00000498479 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
RC3H2-210ENST00000498479 ABCA13Q86UQ4 5058 aa3.83□□□□□ -1.8
RC3H2-210ENST00000498479 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
RC3H2-210ENST00000498479 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
RC3H2-210ENST00000498479 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
RC3H2-210ENST00000498479 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
RC3H2-210ENST00000498479 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
RC3H2-210ENST00000498479 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
RC3H2-210ENST00000498479 MT1MQ8N339 61 aa3.69□□□□□ -1.82
RC3H2-210ENST00000498479 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms