RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 STARD9Q9P2P6 4700 aa0.78□□□□□ -2.29
CLK1-214ENST00000496205 DNAH9Q9NYC9 4486 aa0.77□□□□□ -2.29
CLK1-214ENST00000496205 TENM2Q9NT68 2774 aa0.77□□□□□ -2.29
CLK1-214ENST00000496205 SPRR1AP35321 89 aa0.77□□□□□ -2.29
CLK1-214ENST00000496205 KLK9Q2XQG4 91 aa0.77□□□□□ -2.29
CLK1-214ENST00000496205 H1FX-AS1Q4G0G2 97 aa0.77□□□□□ -2.29
CLK1-214ENST00000496205 NOTCH1P46531 2555 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 MGAM2Q2M2H8 2515 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 DNAH1Q9P2D7 4330 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 IAPPP10997 89 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 WFDC13Q8IUB5 93 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 SMIM2Q9BVW6 85 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 NBEAL2Q6ZNJ1 2754 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 STAB2Q8WWQ8 2551 aa0.76□□□□□ -2.29
CLK1-214ENST00000496205 KMT2CQ8NEZ4 4911 aaKnown RBP0.76□□□□□ -2.29
CLK1-214ENST00000496205 VPS13BQ7Z7G8 4022 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 HUWE1Q7Z6Z7 4374 aaKnown RBP0.75□□□□□ -2.29
CLK1-214ENST00000496205 PKHD1P08F94 4074 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 SPRR1BP22528 89 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 DNAH17Q9UFH2 4485 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 MEGF8Q7Z7M0 2845 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 DNAH2Q9P225 4427 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 SACSQ9NZJ4 4579 aa0.75□□□□□ -2.29
CLK1-214ENST00000496205 DNAH5Q8TE73 4624 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 VPS13DQ5THJ4 4388 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 DNAH10Q8IVF4 4471 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 NDUFA1O15239 70 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 DEFB130BP0DP73 79 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 DEFB130AP0DP74 79 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 RPS27P42677 84 aaKnown RBP0.74□□□□□ -2.29
CLK1-214ENST00000496205 RPS27LQ71UM5 84 aaKnown RBP0.74□□□□□ -2.29
CLK1-214ENST00000496205 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 WFDC10BQ8IUB3 73 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
CLK1-214ENST00000496205 PKD1P98161 4303 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 HYDINQ4G0P3 5121 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 DNAH11Q96DT5 4516 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 LYNX1G3V0Z9 82 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 H0YGG7 62 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 KAAG1Q9UBP8 84 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 DNAH8Q96JB1 4490 aa0.73□□□□□ -2.29
CLK1-214ENST00000496205 LINC01590Q5TEZ4 76 aa0.72□□□□□ -2.29
CLK1-214ENST00000496205 TTTY10Q9BZA0 68 aa0.72□□□□□ -2.29
CLK1-214ENST00000496205 DEFB133Q30KQ1 61 aa0.71□□□□□ -2.3
CLK1-214ENST00000496205 DEFB109BQ30KR1 87 aa0.71□□□□□ -2.3
CLK1-214ENST00000496205 RYR3Q15413 4870 aa0.71□□□□□ -2.3
CLK1-214ENST00000496205 RYR2Q92736 4967 aa0.7□□□□□ -2.3
CLK1-214ENST00000496205 PKHD1L1Q86WI1 4243 aa0.7□□□□□ -2.3
CLK1-214ENST00000496205 SPINK1P00995 79 aa0.7□□□□□ -2.3
CLK1-214ENST00000496205 PRLHP81277 87 aa0.7□□□□□ -2.3
CLK1-214ENST00000496205 DEFB124Q8NES8 71 aa0.7□□□□□ -2.3
CLK1-214ENST00000496205 LRP1BQ9NZR2 4599 aa0.69□□□□□ -2.3
CLK1-214ENST00000496205 DEFB108AA8MXU0 73 aa0.69□□□□□ -2.3
CLK1-214ENST00000496205 RPL39P62891 51 aaKnown RBP0.69□□□□□ -2.3
CLK1-214ENST00000496205 APOBP04114 4563 aaKnown RBP0.69□□□□□ -2.3
CLK1-214ENST00000496205 RYR1P21817 5038 aa0.69□□□□□ -2.3
CLK1-214ENST00000496205 DYNC1H1Q14204 4646 aaKnown RBP0.69□□□□□ -2.3
CLK1-214ENST00000496205 H3BSH0 61 aa0.68□□□□□ -2.3
CLK1-214ENST00000496205 DEFB110Q30KQ9 67 aa0.68□□□□□ -2.3
CLK1-214ENST00000496205 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
CLK1-214ENST00000496205 ARHGAP5-AS1Q96IT6 56 aa0.68□□□□□ -2.3
CLK1-214ENST00000496205 SMR3AQ99954 134 aa0.68□□□□□ -2.3
CLK1-214ENST00000496205 TNXBP22105 4242 aa0.68□□□□□ -2.3
CLK1-214ENST00000496205 WT1-ASQ06250 92 aa0.67□□□□□ -2.3
CLK1-214ENST00000496205 LEAP2Q969E1 77 aa0.67□□□□□ -2.3
CLK1-214ENST00000496205 S4R3F8 94 aa0.67□□□□□ -2.3
CLK1-214ENST00000496205 SRRM2Q9UQ35 2752 aaKnown RBP0.67□□□□□ -2.3
CLK1-214ENST00000496205 FAT3Q8TDW7 4589 aa0.66□□□□□ -2.3
CLK1-214ENST00000496205 HSPG2P98160 4391 aa0.66□□□□□ -2.3
CLK1-214ENST00000496205 MMP24-AS1A0A0U1RRL7 71 aa0.66□□□□□ -2.3
CLK1-214ENST00000496205 A8MTW9 85 aa0.66□□□□□ -2.3
CLK1-214ENST00000496205 MYCBP2O75592 4640 aa0.66□□□□□ -2.3
CLK1-214ENST00000496205 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.3
CLK1-214ENST00000496205 FAT1Q14517 4588 aa0.65□□□□□ -2.31
CLK1-214ENST00000496205 H3BUA1 57 aa0.65□□□□□ -2.31
CLK1-214ENST00000496205 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
CLK1-214ENST00000496205 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
CLK1-214ENST00000496205 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
CLK1-214ENST00000496205 HERC2O95714 4834 aa0.65□□□□□ -2.31
CLK1-214ENST00000496205 ABCA13Q86UQ4 5058 aa0.64□□□□□ -2.31
CLK1-214ENST00000496205 STATHP02808 62 aa0.64□□□□□ -2.31
CLK1-214ENST00000496205 POLR2KP53803 58 aaKnown RBP0.64□□□□□ -2.31
CLK1-214ENST00000496205 DEFB108BQ8NET1 73 aa0.64□□□□□ -2.31
CLK1-214ENST00000496205 TMEM167AQ8TBQ9 72 aa0.64□□□□□ -2.31
CLK1-214ENST00000496205 DEFB104AQ8WTQ1 72 aa0.64□□□□□ -2.31
CLK1-214ENST00000496205 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
CLK1-214ENST00000496205 BIRC6Q9NR09 4857 aa0.64□□□□□ -2.31
CLK1-214ENST00000496205 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
CLK1-214ENST00000496205 IGLV5-48A0A075B6I7 105 aa0.63□□□□□ -2.31
CLK1-214ENST00000496205 KIAA1109Q2LD37 5005 aa0.63□□□□□ -2.31
CLK1-214ENST00000496205 HERC1Q15751 4861 aa0.62□□□□□ -2.31
CLK1-214ENST00000496205 PCLOQ9Y6V0 5065 aa0.62□□□□□ -2.31
CLK1-214ENST00000496205 K7EIM0 57 aa0.62□□□□□ -2.31
CLK1-214ENST00000496205 PRCDQ00LT1 54 aa0.62□□□□□ -2.31
CLK1-214ENST00000496205 TOMM7Q9P0U1 55 aa0.61□□□□□ -2.31
CLK1-214ENST00000496205 LRP2P98164 4655 aa0.61□□□□□ -2.31
CLK1-214ENST00000496205 GPR98Q8WXG9 6306 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms