RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
SMARCAL1-213ENST00000496037 A6NED7 52 aa5.03□□□□□ -1.6
SMARCAL1-213ENST00000496037 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
SMARCAL1-213ENST00000496037 Q6ZQT0 140 aa5.03□□□□□ -1.6
SMARCAL1-213ENST00000496037 TRBV7-4A0A0J9YYF1 115 aa5.02□□□□□ -1.61
SMARCAL1-213ENST00000496037 IGLV6-57P01721 117 aa5.02□□□□□ -1.61
SMARCAL1-213ENST00000496037 MT2AP02795 61 aa5.02□□□□□ -1.61
SMARCAL1-213ENST00000496037 SSBP3-AS1Q7Z2R9 100 aa5.02□□□□□ -1.61
SMARCAL1-213ENST00000496037 RPL37P61927 97 aaKnown RBP5.01□□□□□ -1.61
SMARCAL1-213ENST00000496037 SNURFQ9Y675 71 aa5.01□□□□□ -1.61
SMARCAL1-213ENST00000496037 A8MWP4 228 aa5□□□□□ -1.61
SMARCAL1-213ENST00000496037 NREPQ16612 68 aa5□□□□□ -1.61
SMARCAL1-213ENST00000496037 LINC00483Q53H64 154 aa5□□□□□ -1.61
SMARCAL1-213ENST00000496037 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
SMARCAL1-213ENST00000496037 TMEM254Q8TBM7 123 aa4.99□□□□□ -1.61
SMARCAL1-213ENST00000496037 MT1FP04733 61 aa4.98□□□□□ -1.61
SMARCAL1-213ENST00000496037 COX17Q14061 63 aa4.98□□□□□ -1.61
SMARCAL1-213ENST00000496037 LIMD2Q9BT23 127 aa4.98□□□□□ -1.61
SMARCAL1-213ENST00000496037 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
SMARCAL1-213ENST00000496037 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
SMARCAL1-213ENST00000496037 Q1T7F1 81 aa4.94□□□□□ -1.62
SMARCAL1-213ENST00000496037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.94□□□□□ -1.62
SMARCAL1-213ENST00000496037 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
SMARCAL1-213ENST00000496037 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
SMARCAL1-213ENST00000496037 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
SMARCAL1-213ENST00000496037 DEFB116Q30KQ4 102 aa4.91□□□□□ -1.62
SMARCAL1-213ENST00000496037 COX7BP24311 80 aa4.9□□□□□ -1.63
SMARCAL1-213ENST00000496037 IGKV4-1P06312 121 aa4.89□□□□□ -1.63
SMARCAL1-213ENST00000496037 Q5W150 140 aa4.89□□□□□ -1.63
SMARCAL1-213ENST00000496037 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SMARCAL1-213ENST00000496037 Q6ZQY7 126 aa4.88□□□□□ -1.63
SMARCAL1-213ENST00000496037 CYP4F30PQ9H0H9 118 aa4.88□□□□□ -1.63
SMARCAL1-213ENST00000496037 KMT2DO14686 5537 aa4.87□□□□□ -1.63
SMARCAL1-213ENST00000496037 Q8NDZ9 215 aa4.87□□□□□ -1.63
SMARCAL1-213ENST00000496037 A8MUU9 505 aa4.86□□□□□ -1.63
SMARCAL1-213ENST00000496037 SPRR1AP35321 89 aa4.86□□□□□ -1.63
SMARCAL1-213ENST00000496037 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
SMARCAL1-213ENST00000496037 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
SMARCAL1-213ENST00000496037 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.63
SMARCAL1-213ENST00000496037 NDUFB1O75438 58 aa4.84□□□□□ -1.63
SMARCAL1-213ENST00000496037 H3BPC8 53 aa4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 ZCCHC13Q8WW36 166 aaKnown RBP4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
SMARCAL1-213ENST00000496037 TRAV22A0A0B4J277 110 aa4.82□□□□□ -1.64
SMARCAL1-213ENST00000496037 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
SMARCAL1-213ENST00000496037 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
SMARCAL1-213ENST00000496037 Q9BRP9 147 aa4.79□□□□□ -1.64
SMARCAL1-213ENST00000496037 Q6ZRX8 168 aa4.77□□□□□ -1.65
SMARCAL1-213ENST00000496037 Q8N9L7 120 aa4.77□□□□□ -1.65
SMARCAL1-213ENST00000496037 IGLV5-48A0A075B6I7 105 aa4.76□□□□□ -1.65
SMARCAL1-213ENST00000496037 Q5VV11 94 aa4.75□□□□□ -1.65
SMARCAL1-213ENST00000496037 HCG22E2RYF7 251 aa4.73□□□□□ -1.65
SMARCAL1-213ENST00000496037 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
SMARCAL1-213ENST00000496037 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
SMARCAL1-213ENST00000496037 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
SMARCAL1-213ENST00000496037 LOC101927531A0A1B0GV80 90 aa4.7□□□□□ -1.66
SMARCAL1-213ENST00000496037 A0A1B0GU33 70 aa4.69□□□□□ -1.66
SMARCAL1-213ENST00000496037 A0A1W2PNM2 257 aa4.69□□□□□ -1.66
SMARCAL1-213ENST00000496037 A6NN06 94 aa4.69□□□□□ -1.66
SMARCAL1-213ENST00000496037 DSCR10P59022 87 aa4.69□□□□□ -1.66
SMARCAL1-213ENST00000496037 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
SMARCAL1-213ENST00000496037 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
SMARCAL1-213ENST00000496037 SPRR1BP22528 89 aa4.68□□□□□ -1.66
SMARCAL1-213ENST00000496037 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
SMARCAL1-213ENST00000496037 K7EQZ3 153 aa4.65□□□□□ -1.67
SMARCAL1-213ENST00000496037 SPTSSBQ8NFR3 76 aa4.65□□□□□ -1.67
SMARCAL1-213ENST00000496037 H0Y9P7 68 aa4.64□□□□□ -1.67
SMARCAL1-213ENST00000496037 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
SMARCAL1-213ENST00000496037 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
SMARCAL1-213ENST00000496037 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
SMARCAL1-213ENST00000496037 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
SMARCAL1-213ENST00000496037 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
SMARCAL1-213ENST00000496037 COA5Q86WW8 74 aa4.61□□□□□ -1.67
SMARCAL1-213ENST00000496037 Q96NJ1 140 aa4.61□□□□□ -1.67
SMARCAL1-213ENST00000496037 A8MU10 97 aa4.59□□□□□ -1.67
SMARCAL1-213ENST00000496037 ROMO1P60602 79 aa4.59□□□□□ -1.67
SMARCAL1-213ENST00000496037 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
SMARCAL1-213ENST00000496037 CASC2Q6XLA1 102 aa4.59□□□□□ -1.67
SMARCAL1-213ENST00000496037 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
SMARCAL1-213ENST00000496037 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
SMARCAL1-213ENST00000496037 SPRR2EP22531 72 aa4.56□□□□□ -1.68
SMARCAL1-213ENST00000496037 MT3P25713 68 aa4.56□□□□□ -1.68
SMARCAL1-213ENST00000496037 SPRR2BP35325 72 aa4.56□□□□□ -1.68
SMARCAL1-213ENST00000496037 SPRR2AP35326 72 aa4.56□□□□□ -1.68
SMARCAL1-213ENST00000496037 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
SMARCAL1-213ENST00000496037 HRES1P13985 223 aa4.54□□□□□ -1.68
SMARCAL1-213ENST00000496037 A0A087WSZ3 146 aa4.51□□□□□ -1.69
SMARCAL1-213ENST00000496037 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
SMARCAL1-213ENST00000496037 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
SMARCAL1-213ENST00000496037 R4GN34 69 aa4.49□□□□□ -1.69
SMARCAL1-213ENST00000496037 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
SMARCAL1-213ENST00000496037 SPINK7P58062 85 aa4.48□□□□□ -1.69
SMARCAL1-213ENST00000496037 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
SMARCAL1-213ENST00000496037 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
SMARCAL1-213ENST00000496037 SPRR2DP22532 72 aa4.42□□□□□ -1.7
SMARCAL1-213ENST00000496037 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms